FFCP PHASE1:Hg19::chr13:113344345..113344359,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000766!1.42e-19!76;CL:0002057!1.43e-16!42;CL:0000860!9.96e-16!45;CL:0000763!4.57e-15!112;CL:0000049!4.57e-15!112;CL:0002194!8.47e-15!63;CL:0000576!8.47e-15!63;CL:0000040!8.47e-15!63;CL:0000559!8.47e-15!63;CL:0000557!1.36e-14!71;CL:0000839!7.35e-14!70;CL:0002009!8.61e-14!65;CL:0000738!3.54e-13!140;CL:0000037!1.47e-12!172;CL:0000566!1.47e-12!172;CL:0002032!1.35e-11!165;CL:0000837!1.35e-11!165;CL:0000988!1.49e-10!182;CL:0002087!4.22e-10!119;CL:0002031!8.88e-09!124;CL:0000094!8.92e-07!8 | |ontology_enrichment_celltype=CL:0000766!1.42e-19!76;CL:0002057!1.43e-16!42;CL:0000860!9.96e-16!45;CL:0000763!4.57e-15!112;CL:0000049!4.57e-15!112;CL:0002194!8.47e-15!63;CL:0000576!8.47e-15!63;CL:0000040!8.47e-15!63;CL:0000559!8.47e-15!63;CL:0000557!1.36e-14!71;CL:0000839!7.35e-14!70;CL:0002009!8.61e-14!65;CL:0000738!3.54e-13!140;CL:0000037!1.47e-12!172;CL:0000566!1.47e-12!172;CL:0002032!1.35e-11!165;CL:0000837!1.35e-11!165;CL:0000988!1.49e-10!182;CL:0002087!4.22e-10!119;CL:0002031!8.88e-09!124;CL:0000094!8.92e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.94e-13;33!CL:0002057;4.94e-13;33!CL:0000576;2.82e-12;48!CL:0000473;7.53e-12;39!CL:0000234;7.53e-12;39!CL:0000766;1.51e-10;69!CL:0000094;1.36e-07;8 | |ontology_enrichment_celltype_v019=CL:0000860;4.94e-13;33!CL:0002057;4.94e-13;33!CL:0000576;2.82e-12;48!CL:0000473;7.53e-12;39!CL:0000234;7.53e-12;39!CL:0000766;1.51e-10;69!CL:0000094;1.36e-07;8 | ||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.82e-23,72;CL:0000473,3.64e-19,48;CL:0000234,3.64e-19,48;CL:0000860,1.06e-18,42;CL:0002057,1.06e-18,42;CL:0002194,2.13e-17,59;CL:0000576,2.13e-17,59;CL:0000040,2.13e-17,59;CL:0000559,2.13e-17,59;CL:0000557,2.97e-17,67;CL:0000839,1.17e-16,66;CL:0000763,1.21e-16,108;CL:0000049,1.21e-16,108;CL:0002009,4.58e-16,61;CL:0000738,7.46e-13,136;CL:0000037,7.17e-12,168;CL:0002032,4.83e-11,161;CL:0000837,4.83e-11,161;CL:0002087,9.22e-10,115;CL:0000988,1.50e-09,177;CL:0002031,1.40e-08,120;CL:0000094,1.61e-07,8;CL:0002393,8.96e-07,9;CL:0002397,8.96e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.30e-13;42 | |ontology_enrichment_development_v019=CL:0002057;1.30e-13;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.72e-17!115;UBERON:0002405!1.31e-13!115;UBERON:0002193!1.58e-13!112;UBERON:0002390!1.98e-13!102;UBERON:0003061!1.98e-13!102;UBERON:0001049!2.33e-11!57;UBERON:0005068!2.33e-11!57;UBERON:0006241!2.33e-11!57;UBERON:0007135!2.33e-11!57;UBERON:0002371!8.14e-11!80;UBERON:0001474!2.44e-10!86;UBERON:0002780!3.50e-09!41;UBERON:0001890!3.50e-09!41;UBERON:0006240!3.50e-09!41;UBERON:0003080!3.72e-09!42;UBERON:0002616!8.59e-08!59;UBERON:0002020!3.48e-07!34;UBERON:0003528!3.48e-07!34;UBERON:0000062!3.59e-07!511;UBERON:0000955!3.73e-07!69;UBERON:0006238!3.73e-07!69;UBERON:0001893!4.93e-07!34;UBERON:0002791!7.25e-07!33;UBERON:0004765!7.65e-07!101;UBERON:0001434!7.65e-07!101 | |ontology_enrichment_uberon=UBERON:0007023!7.72e-17!115;UBERON:0002405!1.31e-13!115;UBERON:0002193!1.58e-13!112;UBERON:0002390!1.98e-13!102;UBERON:0003061!1.98e-13!102;UBERON:0001049!2.33e-11!57;UBERON:0005068!2.33e-11!57;UBERON:0006241!2.33e-11!57;UBERON:0007135!2.33e-11!57;UBERON:0002371!8.14e-11!80;UBERON:0001474!2.44e-10!86;UBERON:0002780!3.50e-09!41;UBERON:0001890!3.50e-09!41;UBERON:0006240!3.50e-09!41;UBERON:0003080!3.72e-09!42;UBERON:0002616!8.59e-08!59;UBERON:0002020!3.48e-07!34;UBERON:0003528!3.48e-07!34;UBERON:0000062!3.59e-07!511;UBERON:0000955!3.73e-07!69;UBERON:0006238!3.73e-07!69;UBERON:0001893!4.93e-07!34;UBERON:0002791!7.25e-07!33;UBERON:0004765!7.65e-07!101;UBERON:0001434!7.65e-07!101 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.52e-07;41!UBERON:0001890;3.52e-07;41 | |ontology_enrichment_uberon_v019=UBERON:0002780;3.52e-07;41!UBERON:0001890;3.52e-07;41 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.56e-16,114;UBERON:0002193,4.98e-15,108;UBERON:0002390,8.62e-15,98;UBERON:0003061,8.62e-15,98;UBERON:0002405,6.46e-14,93;UBERON:0002371,8.60e-13,76;UBERON:0001474,4.89e-12,82;UBERON:0001049,1.39e-11,56;UBERON:0005068,1.39e-11,56;UBERON:0006241,1.39e-11,56;UBERON:0007135,1.39e-11,56;UBERON:0000073,3.76e-10,53;UBERON:0002616,3.76e-10,53;UBERON:0004765,1.81e-09,90;UBERON:0002780,7.04e-09,41;UBERON:0001890,7.04e-09,41;UBERON:0003080,7.04e-09,41;UBERON:0006240,7.04e-09,41;UBERON:0005172,3.32e-07,54;UBERON:0005173,3.32e-07,54;UBERON:0000955,3.60e-07,68;UBERON:0006238,3.60e-07,68;UBERON:0001434,5.28e-07,100;UBERON:0001016,9.45e-07,89 | |||
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| ||
|short_description=p4@ATP11A | |short_description=p4@ATP11A | ||
}} | }} |
Revision as of 03:15, 18 November 2012
Short description: | p4@ATP11A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_ATP11A_5end |
Coexpression cluster: | C3354_gall_bronchogenic_Eosinophils_Neutrophils_lung_CD14_granulocyte |
Association with transcript: | -283bp_to_ENST00000283558, ENST00000375630, ENST00000375645, ENST00000487903, NM_015205, NM_032189, uc001vsi.3, uc001vsj.3_5end |
EntrezGene: | ATP11A |
HGNC: | 13552 |
UniProt: | P98196E9PEJ6Q659C3Q6PJ25 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.82e-23 | 72 |
defensive cell | 3.64e-19 | 48 |
phagocyte | 3.64e-19 | 48 |
classical monocyte | 1.06e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.06e-18 | 42 |
monopoietic cell | 2.13e-17 | 59 |
monocyte | 2.13e-17 | 59 |
monoblast | 2.13e-17 | 59 |
promonocyte | 2.13e-17 | 59 |
granulocyte monocyte progenitor cell | 2.97e-17 | 67 |
myeloid lineage restricted progenitor cell | 1.17e-16 | 66 |
myeloid cell | 1.21e-16 | 108 |
common myeloid progenitor | 1.21e-16 | 108 |
macrophage dendritic cell progenitor | 4.58e-16 | 61 |
leukocyte | 7.46e-13 | 136 |
hematopoietic stem cell | 7.17e-12 | 168 |
hematopoietic oligopotent progenitor cell | 4.83e-11 | 161 |
hematopoietic multipotent progenitor cell | 4.83e-11 | 161 |
nongranular leukocyte | 9.22e-10 | 115 |
hematopoietic cell | 1.50e-09 | 177 |
hematopoietic lineage restricted progenitor cell | 1.40e-08 | 120 |
granulocyte | 1.61e-07 | 8 |
intermediate monocyte | 8.96e-07 | 9 |
CD14-positive, CD16-positive monocyte | 8.96e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
adult organism | 9.56e-16 | 114 |
hemolymphoid system | 4.98e-15 | 108 |
hematopoietic system | 8.62e-15 | 98 |
blood island | 8.62e-15 | 98 |
immune system | 6.46e-14 | 93 |
bone marrow | 8.60e-13 | 76 |
bone element | 4.89e-12 | 82 |
neural tube | 1.39e-11 | 56 |
neural rod | 1.39e-11 | 56 |
future spinal cord | 1.39e-11 | 56 |
neural keel | 1.39e-11 | 56 |
regional part of nervous system | 3.76e-10 | 53 |
regional part of brain | 3.76e-10 | 53 |
skeletal element | 1.81e-09 | 90 |
regional part of forebrain | 7.04e-09 | 41 |
forebrain | 7.04e-09 | 41 |
anterior neural tube | 7.04e-09 | 41 |
future forebrain | 7.04e-09 | 41 |
abdomen element | 3.32e-07 | 54 |
abdominal segment element | 3.32e-07 | 54 |
brain | 3.60e-07 | 68 |
future brain | 3.60e-07 | 68 |
skeletal system | 5.28e-07 | 100 |
nervous system | 9.45e-07 | 89 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.