FFCP PHASE1:Hg19::chr14:81687617..81687655,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000037!2.22e-11!172;CL:0000566!2.22e-11!172;CL:0000988!1.61e-10!182;CL:0000738!3.15e-10!140;CL:0002032!5.21e-10!165;CL:0000837!5.21e-10!165;CL:0002087!1.08e-08!119;CL:0000860!1.55e-08!45;CL:0000763!1.98e-08!112;CL:0000049!1.98e-08!112;CL:0002031!2.01e-08!124;CL:0002057!1.36e-07!42;CL:0002009!1.94e-07!65;CL:0000557!3.78e-07!71;CL:0002194!4.90e-07!63;CL:0000576!4.90e-07!63;CL:0000040!4.90e-07!63;CL:0000559!4.90e-07!63 | |ontology_enrichment_celltype=CL:0000037!2.22e-11!172;CL:0000566!2.22e-11!172;CL:0000988!1.61e-10!182;CL:0000738!3.15e-10!140;CL:0002032!5.21e-10!165;CL:0000837!5.21e-10!165;CL:0002087!1.08e-08!119;CL:0000860!1.55e-08!45;CL:0000763!1.98e-08!112;CL:0000049!1.98e-08!112;CL:0002031!2.01e-08!124;CL:0002057!1.36e-07!42;CL:0002009!1.94e-07!65;CL:0000557!3.78e-07!71;CL:0002194!4.90e-07!63;CL:0000576!4.90e-07!63;CL:0000040!4.90e-07!63;CL:0000559!4.90e-07!63 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.90e-09;33!CL:0002057;1.90e-09;33 | |ontology_enrichment_celltype_v019=CL:0000860;1.90e-09;33!CL:0002057;1.90e-09;33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000037,5.10e-11,168;CL:0000988,1.46e-10,177;CL:0000738,9.53e-10,136;CL:0002032,9.76e-10,161;CL:0000837,9.76e-10,161;CL:0000763,1.21e-08,108;CL:0000049,1.21e-08,108;CL:0002087,3.97e-08,115;CL:0000860,4.64e-08,42;CL:0002057,4.64e-08,42;CL:0002031,1.60e-07,120;CL:0002009,2.53e-07,61;CL:0002194,3.78e-07,59;CL:0000576,3.78e-07,59;CL:0000040,3.78e-07,59;CL:0000559,3.78e-07,59;CL:0000557,9.59e-07,67 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!5.01e-07!235 | |ontology_enrichment_disease=DOID:162!5.01e-07!235 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.50e-07!57;UBERON:0005068!5.50e-07!57;UBERON:0006241!5.50e-07!57;UBERON:0007135!5.50e-07!57 | |ontology_enrichment_uberon=UBERON:0001049!5.50e-07!57;UBERON:0005068!5.50e-07!57;UBERON:0006241!5.50e-07!57;UBERON:0007135!5.50e-07!57 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.61e-08,56;UBERON:0005068,3.61e-08,56;UBERON:0006241,3.61e-08,56;UBERON:0007135,3.61e-08,56;UBERON:0000073,1.32e-07,53;UBERON:0002616,1.32e-07,53;UBERON:0002780,7.67e-07,41;UBERON:0001890,7.67e-07,41;UBERON:0003080,7.67e-07,41;UBERON:0006240,7.67e-07,41 | |||
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| ||
|short_description=p5@GTF2A1 | |short_description=p5@GTF2A1 | ||
}} | }} |
Revision as of 15:09, 17 November 2012
Short description: | p5@GTF2A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_GTF2A1_5end |
Coexpression cluster: | NA |
Association with transcript: | -42bp_to_ENST00000434192, NM_201595, uc001xvg.1_5end |
EntrezGene: | GTF2A1 |
HGNC: | 4646 |
UniProt: | P52655 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 5.10e-11 | 168 |
hematopoietic cell | 1.46e-10 | 177 |
leukocyte | 9.53e-10 | 136 |
hematopoietic oligopotent progenitor cell | 9.76e-10 | 161 |
hematopoietic multipotent progenitor cell | 9.76e-10 | 161 |
myeloid cell | 1.21e-08 | 108 |
common myeloid progenitor | 1.21e-08 | 108 |
nongranular leukocyte | 3.97e-08 | 115 |
classical monocyte | 4.64e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.64e-08 | 42 |
hematopoietic lineage restricted progenitor cell | 1.60e-07 | 120 |
macrophage dendritic cell progenitor | 2.53e-07 | 61 |
monopoietic cell | 3.78e-07 | 59 |
monocyte | 3.78e-07 | 59 |
monoblast | 3.78e-07 | 59 |
promonocyte | 3.78e-07 | 59 |
granulocyte monocyte progenitor cell | 9.59e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
neural tube | 3.61e-08 | 56 |
neural rod | 3.61e-08 | 56 |
future spinal cord | 3.61e-08 | 56 |
neural keel | 3.61e-08 | 56 |
regional part of nervous system | 1.32e-07 | 53 |
regional part of brain | 1.32e-07 | 53 |
regional part of forebrain | 7.67e-07 | 41 |
forebrain | 7.67e-07 | 41 |
anterior neural tube | 7.67e-07 | 41 |
future forebrain | 7.67e-07 | 41 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.