FFCP PHASE1:Hg19::chr1:6052700..6052785,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000037!1.07e-35!172;CL:0000566!1.07e-35!172;CL:0000988!1.11e-33!182;CL:0000738!1.66e-33!140;CL:0002032!1.78e-33!165;CL:0000837!1.78e-33!165;CL:0002087!3.42e-30!119;CL:0002031!7.67e-28!124;CL:0000860!3.45e-18!45;CL:0002057!9.54e-18!42;CL:0000763!1.56e-17!112;CL:0000049!1.56e-17!112;CL:0000766!2.16e-17!76;CL:0000542!1.74e-15!53;CL:0000051!1.74e-15!53;CL:0000838!1.80e-15!52;CL:0000839!1.61e-13!70;CL:0002194!2.18e-13!63;CL:0000576!2.18e-13!63;CL:0000040!2.18e-13!63;CL:0000559!2.18e-13!63;CL:0000557!4.22e-13!71;CL:0002009!1.43e-12!65;CL:0000084!1.29e-10!25;CL:0000827!1.29e-10!25;CL:0000791!3.42e-09!18;CL:0000789!3.42e-09!18;CL:0002420!3.42e-09!18;CL:0002419!3.42e-09!18;CL:0000790!3.42e-09!18 | |ontology_enrichment_celltype=CL:0000037!1.07e-35!172;CL:0000566!1.07e-35!172;CL:0000988!1.11e-33!182;CL:0000738!1.66e-33!140;CL:0002032!1.78e-33!165;CL:0000837!1.78e-33!165;CL:0002087!3.42e-30!119;CL:0002031!7.67e-28!124;CL:0000860!3.45e-18!45;CL:0002057!9.54e-18!42;CL:0000763!1.56e-17!112;CL:0000049!1.56e-17!112;CL:0000766!2.16e-17!76;CL:0000542!1.74e-15!53;CL:0000051!1.74e-15!53;CL:0000838!1.80e-15!52;CL:0000839!1.61e-13!70;CL:0002194!2.18e-13!63;CL:0000576!2.18e-13!63;CL:0000040!2.18e-13!63;CL:0000559!2.18e-13!63;CL:0000557!4.22e-13!71;CL:0002009!1.43e-12!65;CL:0000084!1.29e-10!25;CL:0000827!1.29e-10!25;CL:0000791!3.42e-09!18;CL:0000789!3.42e-09!18;CL:0002420!3.42e-09!18;CL:0002419!3.42e-09!18;CL:0000790!3.42e-09!18 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.94e-13;33!CL:0002057;1.94e-13;33!CL:0000084;1.23e-10;25!CL:0000576;1.26e-10;48!CL:0002087;3.50e-10;104!CL:0000791;3.38e-09;18!CL:0000789;3.38e-09;18!CL:0002419;3.38e-09;18!CL:0000473;4.99e-09;39!CL:0000234;4.99e-09;39!CL:0000542;5.05e-09;53!CL:0000766;4.08e-08;69!CL:0000738;9.80e-08;136 | |ontology_enrichment_celltype_v019=CL:0000860;1.94e-13;33!CL:0002057;1.94e-13;33!CL:0000084;1.23e-10;25!CL:0000576;1.26e-10;48!CL:0002087;3.50e-10;104!CL:0000791;3.38e-09;18!CL:0000789;3.38e-09;18!CL:0002419;3.38e-09;18!CL:0000473;4.99e-09;39!CL:0000234;4.99e-09;39!CL:0000542;5.05e-09;53!CL:0000766;4.08e-08;69!CL:0000738;9.80e-08;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.09e-35,168;CL:0000988,8.48e-34,177;CL:0000738,2.62e-33,136;CL:0002032,3.42e-33,161;CL:0000837,3.42e-33,161;CL:0002087,4.72e-30,115;CL:0002031,1.18e-27,120;CL:0000860,9.52e-18,42;CL:0002057,9.52e-18,42;CL:0000763,2.74e-17,108;CL:0000049,2.74e-17,108;CL:0000766,2.79e-17,72;CL:0000542,1.73e-15,53;CL:0000051,1.73e-15,53;CL:0000838,1.80e-15,52;CL:0000473,3.20e-14,48;CL:0000234,3.20e-14,48;CL:0000839,2.33e-13,66;CL:0002194,2.91e-13,59;CL:0000576,2.91e-13,59;CL:0000040,2.91e-13,59;CL:0000559,2.91e-13,59;CL:0000557,6.27e-13,67;CL:0002009,2.05e-12,61;CL:0000084,1.29e-10,25;CL:0000827,1.29e-10,25;CL:0000791,3.42e-09,18;CL:0000789,3.42e-09,18;CL:0002420,3.42e-09,18;CL:0002419,3.42e-09,18;CL:0000790,3.42e-09,18 | |||
|ontology_enrichment_development_v019=CL:0002057;3.75e-13;42!CL:0000790;3.38e-09;18!CL:0000051;5.05e-09;53 | |ontology_enrichment_development_v019=CL:0002057;3.75e-13;42!CL:0000790;3.38e-09;18!CL:0000051;5.05e-09;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.11e-20!57;UBERON:0005068!2.11e-20!57;UBERON:0006241!2.11e-20!57;UBERON:0007135!2.11e-20!57;UBERON:0002780!1.30e-16!41;UBERON:0001890!1.30e-16!41;UBERON:0006240!1.30e-16!41;UBERON:0002616!3.33e-16!59;UBERON:0002390!3.52e-16!102;UBERON:0003061!3.52e-16!102;UBERON:0003080!1.02e-15!42;UBERON:0000955!1.51e-15!69;UBERON:0006238!1.51e-15!69;UBERON:0002020!3.71e-15!34;UBERON:0003528!3.71e-15!34;UBERON:0001893!4.26e-15!34;UBERON:0001869!1.23e-14!32;UBERON:0002791!1.88e-14!33;UBERON:0005743!9.78e-14!86;UBERON:0001017!1.31e-13!82;UBERON:0002193!2.39e-13!112;UBERON:0003075!2.64e-13!86;UBERON:0007284!2.64e-13!86;UBERON:0007023!4.28e-13!115;UBERON:0002346!1.06e-12!90;UBERON:0002619!1.31e-12!22;UBERON:0000073!2.25e-11!94;UBERON:0001016!2.25e-11!94;UBERON:0001950!2.29e-11!20;UBERON:0000956!1.13e-10!25;UBERON:0000203!1.13e-10!25;UBERON:0002371!1.29e-10!80;UBERON:0001474!7.81e-10!86;UBERON:0003056!1.46e-09!61;UBERON:0004765!7.85e-07!101;UBERON:0001434!7.85e-07!101 | |ontology_enrichment_uberon=UBERON:0001049!2.11e-20!57;UBERON:0005068!2.11e-20!57;UBERON:0006241!2.11e-20!57;UBERON:0007135!2.11e-20!57;UBERON:0002780!1.30e-16!41;UBERON:0001890!1.30e-16!41;UBERON:0006240!1.30e-16!41;UBERON:0002616!3.33e-16!59;UBERON:0002390!3.52e-16!102;UBERON:0003061!3.52e-16!102;UBERON:0003080!1.02e-15!42;UBERON:0000955!1.51e-15!69;UBERON:0006238!1.51e-15!69;UBERON:0002020!3.71e-15!34;UBERON:0003528!3.71e-15!34;UBERON:0001893!4.26e-15!34;UBERON:0001869!1.23e-14!32;UBERON:0002791!1.88e-14!33;UBERON:0005743!9.78e-14!86;UBERON:0001017!1.31e-13!82;UBERON:0002193!2.39e-13!112;UBERON:0003075!2.64e-13!86;UBERON:0007284!2.64e-13!86;UBERON:0007023!4.28e-13!115;UBERON:0002346!1.06e-12!90;UBERON:0002619!1.31e-12!22;UBERON:0000073!2.25e-11!94;UBERON:0001016!2.25e-11!94;UBERON:0001950!2.29e-11!20;UBERON:0000956!1.13e-10!25;UBERON:0000203!1.13e-10!25;UBERON:0002371!1.29e-10!80;UBERON:0001474!7.81e-10!86;UBERON:0003056!1.46e-09!61;UBERON:0004765!7.85e-07!101;UBERON:0001434!7.85e-07!101 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.76e-13;34!UBERON:0001869;3.62e-13;32!UBERON:0003528;4.49e-13;34!UBERON:0002020;4.49e-13;34!UBERON:0002791;1.01e-12;32!UBERON:0002619;1.07e-12;22!UBERON:0002780;3.83e-12;41!UBERON:0001890;3.83e-12;41!UBERON:0000073;5.49e-12;53!UBERON:0002616;5.49e-12;53!UBERON:0001950;1.91e-11;20!UBERON:0000956;9.47e-11;25!UBERON:0000203;9.47e-11;25!UBERON:0000955;1.22e-08;68!UBERON:0001017;9.25e-08;75 | |ontology_enrichment_uberon_v019=UBERON:0001893;2.76e-13;34!UBERON:0001869;3.62e-13;32!UBERON:0003528;4.49e-13;34!UBERON:0002020;4.49e-13;34!UBERON:0002791;1.01e-12;32!UBERON:0002619;1.07e-12;22!UBERON:0002780;3.83e-12;41!UBERON:0001890;3.83e-12;41!UBERON:0000073;5.49e-12;53!UBERON:0002616;5.49e-12;53!UBERON:0001950;1.91e-11;20!UBERON:0000956;9.47e-11;25!UBERON:0000203;9.47e-11;25!UBERON:0000955;1.22e-08;68!UBERON:0001017;9.25e-08;75 | ||
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| ||
|short_description=p2@KCNAB2 | |short_description=p2@KCNAB2 | ||
}} | }} |
Revision as of 13:47, 17 November 2012
Short description: | p2@KCNAB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_KCNAB2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000378092, ENST00000445501, ENST00000478098, ENST00000493807, uc009vlv.1_5end |
EntrezGene: | KCNAB2 |
HGNC: | 6229 |
UniProt: | Q5TG78 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 2.79e-21 | 56 |
neural rod | 2.79e-21 | 56 |
future spinal cord | 2.79e-21 | 56 |
neural keel | 2.79e-21 | 56 |
regional part of nervous system | 2.96e-20 | 53 |
regional part of brain | 2.96e-20 | 53 |
regional part of forebrain | 1.29e-16 | 41 |
forebrain | 1.29e-16 | 41 |
anterior neural tube | 1.29e-16 | 41 |
future forebrain | 1.29e-16 | 41 |
brain | 3.52e-16 | 68 |
future brain | 3.52e-16 | 68 |
hematopoietic system | 5.76e-16 | 98 |
blood island | 5.76e-16 | 98 |
brain grey matter | 3.70e-15 | 34 |
gray matter | 3.70e-15 | 34 |
telencephalon | 4.25e-15 | 34 |
cerebral hemisphere | 1.23e-14 | 32 |
central nervous system | 3.98e-14 | 81 |
regional part of telencephalon | 4.40e-14 | 32 |
hemolymphoid system | 4.15e-13 | 108 |
neural plate | 4.67e-13 | 82 |
presumptive neural plate | 4.67e-13 | 82 |
adult organism | 1.18e-12 | 114 |
regional part of cerebral cortex | 1.30e-12 | 22 |
neurectoderm | 1.94e-12 | 86 |
nervous system | 1.28e-11 | 89 |
neocortex | 2.28e-11 | 20 |
cerebral cortex | 1.13e-10 | 25 |
pallium | 1.13e-10 | 25 |
bone marrow | 2.14e-10 | 76 |
pre-chordal neural plate | 3.63e-10 | 61 |
bone element | 1.35e-09 | 82 |
immune system | 1.57e-09 | 93 |
ecto-epithelium | 3.97e-08 | 104 |
skeletal element | 2.69e-07 | 90 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
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Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.