FFCP PHASE1:Hg19::chr4:109541740..109541761,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0002321!1.57e-26!248;CL:0000220!1.19e-25!246;CL:0000144!2.49e-24!625;CL:0000548!6.87e-22!679;CL:0000004!6.87e-22!679;CL:0000255!6.87e-22!679;CL:0000012!1.12e-21!682;CL:0002371!5.18e-17!591;CL:0000222!1.24e-16!119;CL:0000055!3.45e-15!180;CL:0000393!3.41e-13!60;CL:0000211!3.41e-13!60;CL:0000183!8.43e-13!59;CL:0000680!1.20e-11!57;CL:0000056!1.20e-11!57;CL:0000355!1.20e-11!57;CL:0000003!1.70e-11!722;CL:0000187!3.28e-11!54;CL:0000066!1.18e-09!254;CL:0000192!1.30e-08!42;CL:0000514!1.30e-08!42;CL:0000221!2.69e-08!71 | |ontology_enrichment_celltype=CL:0002321!1.57e-26!248;CL:0000220!1.19e-25!246;CL:0000144!2.49e-24!625;CL:0000548!6.87e-22!679;CL:0000004!6.87e-22!679;CL:0000255!6.87e-22!679;CL:0000012!1.12e-21!682;CL:0002371!5.18e-17!591;CL:0000222!1.24e-16!119;CL:0000055!3.45e-15!180;CL:0000393!3.41e-13!60;CL:0000211!3.41e-13!60;CL:0000183!8.43e-13!59;CL:0000680!1.20e-11!57;CL:0000056!1.20e-11!57;CL:0000355!1.20e-11!57;CL:0000003!1.70e-11!722;CL:0000187!3.28e-11!54;CL:0000066!1.18e-09!254;CL:0000192!1.30e-08!42;CL:0000514!1.30e-08!42;CL:0000221!2.69e-08!71 | ||
|ontology_enrichment_celltype_v019=CL:0000187;2.42e-07;55 | |ontology_enrichment_celltype_v019=CL:0000187;2.42e-07;55 | ||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.16e-26,250;CL:0000222,1.12e-16,121;CL:0000393,1.04e-12,61;CL:0000211,1.04e-12,61;CL:0000680,3.41e-11,58;CL:0000056,3.41e-11,58;CL:0000355,3.41e-11,58;CL:0000187,9.41e-11,55;CL:0000066,8.00e-10,253;CL:0000221,1.85e-08,72;CL:0000192,3.57e-08,43;CL:0000514,3.57e-08,43 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!3.77e-13!82;UBERON:0005256!6.98e-13!143;UBERON:0000914!2.42e-12!83;UBERON:0002329!2.42e-12!83;UBERON:0003077!2.42e-12!83;UBERON:0003059!2.42e-12!83;UBERON:0007282!2.42e-12!83;UBERON:0009618!2.42e-12!83;UBERON:0007285!2.42e-12!83;UBERON:0004290!3.31e-11!70;UBERON:0001134!1.06e-10!61;UBERON:0002036!1.06e-10!61;UBERON:0003082!1.06e-10!61;UBERON:0000490!2.99e-10!138;UBERON:0002385!1.37e-09!63;UBERON:0001015!1.37e-09!63;UBERON:0000383!1.37e-09!63;UBERON:0002049!2.34e-09!79;UBERON:0007798!2.34e-09!79;UBERON:0002100!4.42e-09!216;UBERON:0000119!6.27e-09!312;UBERON:0003914!1.31e-08!118;UBERON:0000483!2.84e-08!309;UBERON:0000055!7.86e-07!69 | |ontology_enrichment_uberon=UBERON:0000486!3.77e-13!82;UBERON:0005256!6.98e-13!143;UBERON:0000914!2.42e-12!83;UBERON:0002329!2.42e-12!83;UBERON:0003077!2.42e-12!83;UBERON:0003059!2.42e-12!83;UBERON:0007282!2.42e-12!83;UBERON:0009618!2.42e-12!83;UBERON:0007285!2.42e-12!83;UBERON:0004290!3.31e-11!70;UBERON:0001134!1.06e-10!61;UBERON:0002036!1.06e-10!61;UBERON:0003082!1.06e-10!61;UBERON:0000490!2.99e-10!138;UBERON:0002385!1.37e-09!63;UBERON:0001015!1.37e-09!63;UBERON:0000383!1.37e-09!63;UBERON:0002049!2.34e-09!79;UBERON:0007798!2.34e-09!79;UBERON:0002100!4.42e-09!216;UBERON:0000119!6.27e-09!312;UBERON:0003914!1.31e-08!118;UBERON:0000483!2.84e-08!309;UBERON:0000055!7.86e-07!69 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,6.74e-13,78;UBERON:0000486,9.33e-13,83;UBERON:0003104,5.44e-11,160;UBERON:0009142,5.44e-11,160;UBERON:0002329,8.05e-11,71;UBERON:0003059,8.05e-11,71;UBERON:0007282,8.05e-11,71;UBERON:0004290,8.05e-11,71;UBERON:0009618,8.05e-11,71;UBERON:0000490,1.00e-10,148;UBERON:0007524,1.20e-10,73;UBERON:0003077,2.69e-10,72;UBERON:0007285,2.69e-10,72;UBERON:0001134,2.72e-10,62;UBERON:0002036,2.72e-10,62;UBERON:0003082,2.72e-10,62;UBERON:0005256,1.12e-09,122;UBERON:0000119,1.30e-09,309;UBERON:0002049,2.96e-09,78;UBERON:0007798,2.96e-09,78;UBERON:0002385,3.19e-09,64;UBERON:0001015,3.19e-09,64;UBERON:0000383,3.19e-09,64;UBERON:0000483,6.28e-09,306;UBERON:0003914,7.62e-09,117;UBERON:0002100,2.26e-08,199;UBERON:0000055,9.85e-07,68 | |||
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| ||
|short_description=p2@RPL34 | |short_description=p2@RPL34 | ||
}} | }} |
Revision as of 12:24, 17 November 2012
Short description: | p2@RPL34 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_RPL34_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000394665, NM_033625, uc003hza.2_5end |
EntrezGene: | RPL34 |
HGNC: | 10340 |
UniProt: | P49207 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.16e-26 | 250 |
mesodermal cell | 1.12e-16 | 121 |
electrically responsive cell | 1.04e-12 | 61 |
electrically active cell | 1.04e-12 | 61 |
muscle precursor cell | 3.41e-11 | 58 |
myoblast | 3.41e-11 | 58 |
multi-potent skeletal muscle stem cell | 3.41e-11 | 58 |
muscle cell | 9.41e-11 | 55 |
epithelial cell | 8.00e-10 | 253 |
ectodermal cell | 1.85e-08 | 72 |
smooth muscle cell | 3.57e-08 | 43 |
smooth muscle myoblast | 3.57e-08 | 43 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 6.74e-13 | 78 |
multilaminar epithelium | 9.33e-13 | 83 |
mesenchyme | 5.44e-11 | 160 |
entire embryonic mesenchyme | 5.44e-11 | 160 |
somite | 8.05e-11 | 71 |
presomitic mesoderm | 8.05e-11 | 71 |
presumptive segmental plate | 8.05e-11 | 71 |
dermomyotome | 8.05e-11 | 71 |
trunk paraxial mesoderm | 8.05e-11 | 71 |
unilaminar epithelium | 1.00e-10 | 148 |
dense mesenchyme tissue | 1.20e-10 | 73 |
paraxial mesoderm | 2.69e-10 | 72 |
presumptive paraxial mesoderm | 2.69e-10 | 72 |
skeletal muscle tissue | 2.72e-10 | 62 |
striated muscle tissue | 2.72e-10 | 62 |
myotome | 2.72e-10 | 62 |
trunk mesenchyme | 1.12e-09 | 122 |
cell layer | 1.30e-09 | 309 |
vasculature | 2.96e-09 | 78 |
vascular system | 2.96e-09 | 78 |
muscle tissue | 3.19e-09 | 64 |
musculature | 3.19e-09 | 64 |
musculature of body | 3.19e-09 | 64 |
epithelium | 6.28e-09 | 306 |
epithelial tube | 7.62e-09 | 117 |
trunk | 2.26e-08 | 199 |
vessel | 9.85e-07 | 68 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.