FFCP PHASE1:Hg19::chr20:56273255..56273292,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!1.75e-13!254;CL:0002368!2.22e-13!13;CL:0002076!1.08e-12!43;CL:0000860!1.69e-11!45;CL:0002202!1.98e-11!9;CL:0002632!1.98e-11!9;CL:0000223!2.04e-11!59;CL:0002057!2.83e-10!42;CL:0000557!1.21e-09!71;CL:0000063!4.68e-09!578;CL:0002009!1.88e-08!65;CL:0000839!5.36e-08!70;CL:0000244!5.74e-08!4;CL:0000731!5.74e-08!4;CL:0000766!1.47e-07!76;CL:0002194!4.50e-07!63;CL:0000576!4.50e-07!63;CL:0000040!4.50e-07!63;CL:0000559!4.50e-07!63 | |ontology_enrichment_celltype=CL:0000066!1.75e-13!254;CL:0002368!2.22e-13!13;CL:0002076!1.08e-12!43;CL:0000860!1.69e-11!45;CL:0002202!1.98e-11!9;CL:0002632!1.98e-11!9;CL:0000223!2.04e-11!59;CL:0002057!2.83e-10!42;CL:0000557!1.21e-09!71;CL:0000063!4.68e-09!578;CL:0002009!1.88e-08!65;CL:0000839!5.36e-08!70;CL:0000244!5.74e-08!4;CL:0000731!5.74e-08!4;CL:0000766!1.47e-07!76;CL:0002194!4.50e-07!63;CL:0000576!4.50e-07!63;CL:0000040!4.50e-07!63;CL:0000559!4.50e-07!63 | ||
|ontology_enrichment_celltype_v019=CL:0000244;1.77e-28;4!CL:0000731;1.77e-28;4!CL:0002202;7.93e-19;9!CL:0002632;7.93e-19;9!CL:0002368;5.40e-13;13!CL:0002328;4.50e-10;3!CL:0000307;4.50e-10;3!CL:1001319;3.56e-08;1!CL:1000600;3.56e-08;1 | |ontology_enrichment_celltype_v019=CL:0000244;1.77e-28;4!CL:0000731;1.77e-28;4!CL:0002202;7.93e-19;9!CL:0002632;7.93e-19;9!CL:0002368;5.40e-13;13!CL:0002328;4.50e-10;3!CL:0000307;4.50e-10;3!CL:1001319;3.56e-08;1!CL:1000600;3.56e-08;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000244,1.55e-28,4;CL:0000731,1.55e-28,4;CL:0002202,1.16e-18,9;CL:0002632,1.16e-18,9;CL:0002368,7.01e-13,13;CL:0002328,3.58e-10,3;CL:0000066,4.28e-10,253;CL:0000068,5.94e-10,3;CL:0000069,5.94e-10,3;CL:0000307,5.94e-10,3;CL:0000377,5.94e-10,3;CL:1001319,1.88e-08,1;CL:1000600,1.88e-08,1;CL:0002076,3.80e-07,42 | |||
|ontology_enrichment_development_v019=CL:0000377;4.50e-10;3 | |ontology_enrichment_development_v019=CL:0000377;4.50e-10;3 | ||
|ontology_enrichment_disease=DOID:305!1.17e-07!106 | |ontology_enrichment_disease=DOID:305!1.17e-07!106 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005910!3.17e-10!6;UBERON:0000365!1.49e-09!5;UBERON:0002371!9.94e-08!80;UBERON:0002294!1.59e-07!7;UBERON:0001173!1.59e-07!7;UBERON:0004912!1.59e-07!7;UBERON:0002390!9.67e-07!102;UBERON:0003061!9.67e-07!102 | |ontology_enrichment_uberon=UBERON:0005910!3.17e-10!6;UBERON:0000365!1.49e-09!5;UBERON:0002371!9.94e-08!80;UBERON:0002294!1.59e-07!7;UBERON:0001173!1.59e-07!7;UBERON:0004912!1.59e-07!7;UBERON:0002390!9.67e-07!102;UBERON:0003061!9.67e-07!102 | ||
|ontology_enrichment_uberon_v019=UBERON:0000365;6.70e-35;5!UBERON:0005910;4.46e-29;6!UBERON:0000486;1.76e-14;12!UBERON:0007196;3.07e-11;15!UBERON:0001558;3.07e-11;15!UBERON:0006554;1.24e-10;30!UBERON:0001008;1.24e-10;30!UBERON:0004815;4.50e-10;3!UBERON:0002031;4.50e-10;3!UBERON:0005911;7.90e-09;36!UBERON:0004645;3.56e-08;1!UBERON:0004913;3.56e-08;1!UBERON:0003703;3.56e-08;1!UBERON:0001256;3.56e-08;1!UBERON:0001259;3.56e-08;1!UBERON:0001174;3.56e-08;1!UBERON:0004914;3.56e-08;1!UBERON:0002394;9.12e-08;4!UBERON:0003928;9.12e-08;4 | |ontology_enrichment_uberon_v019=UBERON:0000365;6.70e-35;5!UBERON:0005910;4.46e-29;6!UBERON:0000486;1.76e-14;12!UBERON:0007196;3.07e-11;15!UBERON:0001558;3.07e-11;15!UBERON:0006554;1.24e-10;30!UBERON:0001008;1.24e-10;30!UBERON:0004815;4.50e-10;3!UBERON:0002031;4.50e-10;3!UBERON:0005911;7.90e-09;36!UBERON:0004645;3.56e-08;1!UBERON:0004913;3.56e-08;1!UBERON:0003703;3.56e-08;1!UBERON:0001256;3.56e-08;1!UBERON:0001259;3.56e-08;1!UBERON:0001174;3.56e-08;1!UBERON:0004914;3.56e-08;1!UBERON:0002394;9.12e-08;4!UBERON:0003928;9.12e-08;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,3.13e-35,5;UBERON:0005910,2.37e-29,6;UBERON:0007196,3.84e-11,15;UBERON:0001558,3.84e-11,15;UBERON:0004815,3.58e-10,3;UBERON:0002031,3.58e-10,3;UBERON:0006554,1.76e-08,47;UBERON:0004645,1.88e-08,1;UBERON:0001256,1.88e-08,1;UBERON:0001259,1.88e-08,1;UBERON:0001008,2.79e-08,48;UBERON:0005911,2.96e-08,82;UBERON:0004913,6.24e-08,1;UBERON:0003703,6.24e-08,1;UBERON:0001174,6.24e-08,1;UBERON:0004914,6.24e-08,1 | |||
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| ||
|short_description=p@chr20:56273255..56273292,- | |short_description=p@chr20:56273255..56273292,- | ||
}} | }} |
Revision as of 12:16, 17 November 2012
Short description: | p@chr20:56273255..56273292, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr20:56273255..56273292, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 1.55e-28 | 4 |
urothelial cell | 1.55e-28 | 4 |
epithelial cell of tracheobronchial tree | 1.16e-18 | 9 |
epithelial cell of lower respiratory tract | 1.16e-18 | 9 |
respiratory epithelial cell | 7.01e-13 | 13 |
bronchial epithelial cell | 3.58e-10 | 3 |
epithelial cell | 4.28e-10 | 253 |
duct epithelial cell | 5.94e-10 | 3 |
branched duct epithelial cell | 5.94e-10 | 3 |
tracheal epithelial cell | 5.94e-10 | 3 |
tracheoblast | 5.94e-10 | 3 |
bladder cell | 1.88e-08 | 1 |
lower urinary tract cell | 1.88e-08 | 1 |
endo-epithelial cell | 3.80e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
urothelium | 3.13e-35 | 5 |
transitional epithelium | 2.37e-29 | 6 |
tracheobronchial tree | 3.84e-11 | 15 |
lower respiratory tract | 3.84e-11 | 15 |
lower respiratory tract epithelium | 3.58e-10 | 3 |
epithelium of bronchus | 3.58e-10 | 3 |
urinary system structure | 1.76e-08 | 47 |
urinary bladder urothelium | 1.88e-08 | 1 |
wall of urinary bladder | 1.88e-08 | 1 |
mucosa of urinary bladder | 1.88e-08 | 1 |
renal system | 2.79e-08 | 48 |
endo-epithelium | 2.96e-08 | 82 |
hepatopancreatic ampulla | 6.24e-08 | 1 |
extrahepatic bile duct | 6.24e-08 | 1 |
common bile duct | 6.24e-08 | 1 |
duodenal papilla | 6.24e-08 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.