FFCP PHASE1:Hg19::chr10:90751002..90751013,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!1.33e-23!180;CL:0000057!2.21e-14!75;CL:0000183!4.13e-14!59;CL:0000187!4.71e-13!54;CL:0000680!4.13e-12!57;CL:0000056!4.13e-12!57;CL:0000355!4.13e-12!57;CL:0000393!1.25e-11!60;CL:0000211!1.25e-11!60;CL:0000192!4.36e-10!42;CL:0000514!4.36e-10!42;CL:0002371!5.85e-10!591;CL:0000144!2.82e-09!625;CL:0002321!4.38e-07!248;CL:0000548!5.90e-07!679;CL:0000004!5.90e-07!679;CL:0000255!5.90e-07!679;CL:0000220!6.95e-07!246 | |ontology_enrichment_celltype=CL:0000055!1.33e-23!180;CL:0000057!2.21e-14!75;CL:0000183!4.13e-14!59;CL:0000187!4.71e-13!54;CL:0000680!4.13e-12!57;CL:0000056!4.13e-12!57;CL:0000355!4.13e-12!57;CL:0000393!1.25e-11!60;CL:0000211!1.25e-11!60;CL:0000192!4.36e-10!42;CL:0000514!4.36e-10!42;CL:0002371!5.85e-10!591;CL:0000144!2.82e-09!625;CL:0002321!4.38e-07!248;CL:0000548!5.90e-07!679;CL:0000004!5.90e-07!679;CL:0000255!5.90e-07!679;CL:0000220!6.95e-07!246 | ||
|ontology_enrichment_celltype_v019=CL:0002363;6.61e-07;2!CL:0002554;8.81e-07;2 | |ontology_enrichment_celltype_v019=CL:0002363;6.61e-07;2!CL:0002554;8.81e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000187,1.18e-07,55;CL:0002554,4.14e-07,2;CL:0000680,4.35e-07,58;CL:0000056,4.35e-07,58;CL:0000355,4.35e-07,58;CL:0002363,6.99e-07,2;CL:0000008,6.99e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000008;6.61e-07;2 | |ontology_enrichment_development_v019=CL:0000008;6.61e-07;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!6.82e-12!143;UBERON:0000914!5.57e-11!83;UBERON:0002329!5.57e-11!83;UBERON:0003077!5.57e-11!83;UBERON:0003059!5.57e-11!83;UBERON:0007282!5.57e-11!83;UBERON:0009618!5.57e-11!83;UBERON:0007285!5.57e-11!83;UBERON:0000486!1.39e-10!82;UBERON:0004290!2.45e-10!70;UBERON:0001134!2.62e-10!61;UBERON:0002036!2.62e-10!61;UBERON:0003082!2.62e-10!61;UBERON:0002385!1.63e-09!63;UBERON:0001015!1.63e-09!63;UBERON:0000383!1.63e-09!63;UBERON:0003102!3.06e-08!95;UBERON:0000475!5.62e-08!365;UBERON:0002100!2.58e-07!216 | |ontology_enrichment_uberon=UBERON:0005256!6.82e-12!143;UBERON:0000914!5.57e-11!83;UBERON:0002329!5.57e-11!83;UBERON:0003077!5.57e-11!83;UBERON:0003059!5.57e-11!83;UBERON:0007282!5.57e-11!83;UBERON:0009618!5.57e-11!83;UBERON:0007285!5.57e-11!83;UBERON:0000486!1.39e-10!82;UBERON:0004290!2.45e-10!70;UBERON:0001134!2.62e-10!61;UBERON:0002036!2.62e-10!61;UBERON:0003082!2.62e-10!61;UBERON:0002385!1.63e-09!63;UBERON:0001015!1.63e-09!63;UBERON:0000383!1.63e-09!63;UBERON:0003102!3.06e-08!95;UBERON:0000475!5.62e-08!365;UBERON:0002100!2.58e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0003891;4.86e-07;4!UBERON:0000964;4.86e-07;4!UBERON:0010409;4.86e-07;4!UBERON:0003566;6.61e-07;2!UBERON:0001777;6.61e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0003891;4.86e-07;4!UBERON:0000964;4.86e-07;4!UBERON:0010409;4.86e-07;4!UBERON:0003566;6.61e-07;2!UBERON:0001777;6.61e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005256,1.47e-08,122;UBERON:0003891,4.08e-07,4;UBERON:0007503,5.47e-07,78;UBERON:0000964,6.85e-07,4;UBERON:0010409,6.85e-07,4;UBERON:0004348,6.85e-07,4;UBERON:0005427,6.85e-07,4;UBERON:0003566,6.99e-07,2;UBERON:0001777,6.99e-07,2 | |||
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| ||
|short_description=p7@ACTA2 | |short_description=p7@ACTA2 | ||
}} | }} |
Revision as of 07:39, 17 November 2012
Short description: | p7@ACTA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_ACTA2_5end |
Coexpression cluster: | NA |
Association with transcript: | 31bp_to_ENST00000458159_5end |
EntrezGene: | ACTA2 |
HGNC: | 130 |
UniProt: | F6UVQ4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 1.18e-07 | 55 |
fibroblast of lymphatic vessel | 4.14e-07 | 2 |
muscle precursor cell | 4.35e-07 | 58 |
myoblast | 4.35e-07 | 58 |
multi-potent skeletal muscle stem cell | 4.35e-07 | 58 |
keratocyte | 6.99e-07 | 2 |
migratory cranial neural crest cell | 6.99e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
trunk mesenchyme | 1.47e-08 | 122 |
stroma | 4.08e-07 | 4 |
epithelial vesicle | 5.47e-07 | 78 |
cornea | 6.85e-07 | 4 |
eye surface | 6.85e-07 | 4 |
optic eminence | 6.85e-07 | 4 |
corneal primordium | 6.85e-07 | 4 |
head connective tissue | 6.99e-07 | 2 |
substantia propria of cornea | 6.99e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.