FFCP PHASE1:Hg19::chr6:74104521..74104528,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0000039!4.95e-09!7;CL:0000586!4.95e-09!7 | |ontology_enrichment_celltype=CL:0000039!4.95e-09!7;CL:0000586!4.95e-09!7 | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.35e-32;7!CL:0000586;1.35e-32;7!CL:0000746;1.30e-09;3!CL:0000737;1.59e-07;4 | |ontology_enrichment_celltype_v019=CL:0000039;1.35e-32;7!CL:0000586;1.35e-32;7!CL:0000746;1.30e-09;3!CL:0000737;1.59e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.67e-32,7;CL:0000586,1.67e-32,7;CL:0000746,1.19e-09,3;CL:0000513,1.19e-09,3;CL:0000737,1.49e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.39e-62;10!UBERON:0005564;6.39e-62;10!CL:0000513;1.30e-09;3 | |ontology_enrichment_development_v019=UBERON:0009117;6.39e-62;10!UBERON:0005564;6.39e-62;10!CL:0000513;1.30e-09;3 | ||
|ontology_enrichment_disease=DOID:0050687!1.83e-07!143 | |ontology_enrichment_disease=DOID:0050687!1.83e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:3095;1.78e-18;22!DOID:2994;1.78e-18;22 | |ontology_enrichment_disease_v019=DOID:3095;1.78e-18;22!DOID:2994;1.78e-18;22 | ||
|ontology_enrichment_disease_v019_2=DOID:3095,1.99e-18,22;DOID:2994,1.99e-18,22 | |||
|ontology_enrichment_uberon=UBERON:0004458!7.33e-09!49;UBERON:0002323!2.27e-08!46;UBERON:0000473!3.68e-08!8 | |ontology_enrichment_uberon=UBERON:0004458!7.33e-09!49;UBERON:0002323!2.27e-08!46;UBERON:0000473!3.68e-08!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.07e-77;8!UBERON:0003135;2.39e-56;11!UBERON:0000991;9.15e-30;21!UBERON:0003101;1.97e-28;22!UBERON:0000079;1.97e-28;22!UBERON:0002323;1.23e-13;45!UBERON:0003133;1.05e-10;44!UBERON:0004458;2.42e-09;48!UBERON:0002553;5.10e-09;52 | |ontology_enrichment_uberon_v019=UBERON:0000473;3.07e-77;8!UBERON:0003135;2.39e-56;11!UBERON:0000991;9.15e-30;21!UBERON:0003101;1.97e-28;22!UBERON:0000079;1.97e-28;22!UBERON:0002323;1.23e-13;45!UBERON:0003133;1.05e-10;44!UBERON:0004458;2.42e-09;48!UBERON:0002553;5.10e-09;52 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.60e-77,8;UBERON:0003135,2.69e-56,11;UBERON:0000991,9.72e-30,21;UBERON:0009196,9.72e-30,21;UBERON:0009117,9.72e-30,21;UBERON:0005564,9.72e-30,21;UBERON:0004176,2.08e-28,22;UBERON:0003101,2.08e-28,22;UBERON:0000079,2.08e-28,22;UBERON:0002323,1.67e-19,46;UBERON:0004458,2.54e-18,49;UBERON:0003886,1.21e-16,54;UBERON:0002553,9.41e-15,61;UBERON:0003133,3.28e-13,48;UBERON:0005156,8.54e-11,59;UBERON:0000990,8.54e-11,59 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0.276350017785848,0,0,0,0,0,0.383220493601921,0,0.253019692019503,0,0,0,0,0.127986611154418,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0,0,0,0,0.654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0,0.511707249066704,0.160853921143607,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0,0.107420244868274,0,0.0852266274161009,0,0,0,0.382838137483752,0,0,0,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0.629078458031288,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0.455173793141999,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0.987334088507493,0,0,0,0,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0.063186579628488,0,0,0.664653872707185,0,0.313932918407225,1.19472429772959,0,0,0,0,0,0,0.343972064943233,0,0,0,0,0,0,0,0.19871461170299,0,0.195551382734803,0.961905843018405,0,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0.196854963029498,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0.104909176269996,0.528001682597033,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0.146552233678082,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0.1251909307065,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0.0887023701626388,0,0,0.135939465953663,0.0657727735628491,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0.695433089210318,0,0,0,0,0,0.118332000730565,0.255640214277473,0,0,0,0,0,0.098150233615243,0.365753774946808,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.401206833445841,0,0,0,0.473314686579554,0,0,0.5290268405154,0,0,0,0,1.09265571963696,0,2.34574308406558,0,2.02168778976659,4.26202816797038,2.1218035501107,2.67964130156179,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0.276350017785848,0,0,0,0,0,0.383220493601921,0,0.253019692019503,0,0,0,0,0.127986611154418,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0,0,0,0,0.654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0,0.511707249066704,0.160853921143607,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0,0.107420244868274,0,0.0852266274161009,0,0,0,0.382838137483752,0,0,0,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0.629078458031288,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0.455173793141999,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0.987334088507493,0,0,0,0,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0.063186579628488,0,0,0.664653872707185,0,0.313932918407225,1.19472429772959,0,0,0,0,0,0,0.343972064943233,0,0,0,0,0,0,0,0.19871461170299,0,0.195551382734803,0.961905843018405,0,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0.196854963029498,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0.104909176269996,0.528001682597033,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0.146552233678082,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0.1251909307065,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0.0887023701626388,0,0,0.135939465953663,0.0657727735628491,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0.695433089210318,0,0,0,0,0,0.118332000730565,0.255640214277473,0,0,0,0,0,0.098150233615243,0.365753774946808,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.401206833445841,0,0,0,0.473314686579554,0,0,0.5290268405154,0,0,0,0,1.09265571963696,0,2.34574308406558,0,2.02168778976659,4.26202816797038,2.1218035501107,2.67964130156179,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@DDX43 | |short_description=p4@DDX43 | ||
}} | }} |
Revision as of 17:43, 15 November 2012
Short description: | p4@DDX43 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_DDX43_5end |
Coexpression cluster: | C157_testicular_H9_testis_iPS_teratocarcinoma_colon_trachea |
Association with transcript: | -47bp_to_ENST00000539829_5end |
EntrezGene: | DDX43 |
HGNC: | 18677 |
UniProt: | B4E0C8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.67e-32 | 7 |
germ cell | 1.67e-32 | 7 |
cardiac muscle cell | 1.19e-09 | 3 |
cardiac muscle myoblast | 1.19e-09 | 3 |
striated muscle cell | 1.49e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
testis | 3.60e-77 | 8 |
male reproductive organ | 2.69e-56 | 11 |
gonad | 9.72e-30 | 21 |
indifferent external genitalia | 9.72e-30 | 21 |
indifferent gonad | 9.72e-30 | 21 |
gonad primordium | 9.72e-30 | 21 |
external genitalia | 2.08e-28 | 22 |
male organism | 2.08e-28 | 22 |
male reproductive system | 2.08e-28 | 22 |
body cavity | 1.67e-19 | 46 |
body cavity or lining | 2.54e-18 | 49 |
body cavity precursor | 1.21e-16 | 54 |
anatomical cavity | 9.41e-15 | 61 |
reproductive organ | 3.28e-13 | 48 |
reproductive structure | 8.54e-11 | 59 |
reproductive system | 8.54e-11 | 59 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.99e-18 | 22 |
germ cell cancer | 1.99e-18 | 22 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.