Personal tools

FFCP PHASE1:Mm9::chr5:19413529..19413580,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 8: Line 8:
|id=chr5:19413529..19413580,+
|id=chr5:19413529..19413580,+
|ontology_enrichment_celltype=CL:0000117!1.68e-14!23;CL:0000337!1.68e-14!23;CL:0000540!1.95e-09!33;CL:0000047!1.95e-09!33;CL:0000031!1.95e-09!33;CL:0000404!1.95e-09!33
|ontology_enrichment_celltype=CL:0000117!1.68e-14!23;CL:0000337!1.68e-14!23;CL:0000540!1.95e-09!33;CL:0000047!1.95e-09!33;CL:0000031!1.95e-09!33;CL:0000404!1.95e-09!33
|ontology_enrichment_celltype_v019_2=CL:0000117,7.91e-19,23;CL:0000337,7.91e-19,23;CL:0000540,1.24e-10,33;CL:0000047,1.24e-10,33;CL:0000031,1.24e-10,33;CL:0000404,1.24e-10,33;CL:0000393,7.42e-08,39;CL:0000211,7.42e-08,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!5.25e-27!71;UBERON:0003075!5.25e-27!71;UBERON:0007284!5.25e-27!71;UBERON:0000033!8.31e-26!63;UBERON:0003056!1.03e-25!49;UBERON:0001049!1.49e-25!52;UBERON:0005068!1.49e-25!52;UBERON:0006241!1.49e-25!52;UBERON:0007135!1.49e-25!52;UBERON:0000955!5.18e-24!50;UBERON:0006238!5.18e-24!50;UBERON:0002616!2.99e-23!49;UBERON:0003080!2.27e-22!40;UBERON:0002020!4.31e-22!34;UBERON:0001017!4.57e-22!73;UBERON:0005743!4.57e-22!73;UBERON:0000073!7.22e-22!75;UBERON:0001016!7.22e-22!75;UBERON:0004121!1.10e-21!102;UBERON:0000924!1.10e-21!102;UBERON:0006601!1.10e-21!102;UBERON:0002780!1.11e-21!39;UBERON:0001890!1.11e-21!39;UBERON:0006240!1.11e-21!39;UBERON:0002791!6.07e-19!29;UBERON:0003528!6.07e-19!29;UBERON:0001893!6.07e-19!29;UBERON:0000153!7.89e-14!94;UBERON:0000956!8.16e-14!21;UBERON:0001869!8.16e-14!21;UBERON:0000203!8.16e-14!21;UBERON:0007811!4.61e-13!86;UBERON:0002619!2.71e-11!17;UBERON:0002021!2.26e-09!10;UBERON:0000411!2.26e-09!10;UBERON:0001950!2.26e-09!10
|ontology_enrichment_uberon=UBERON:0002346!5.25e-27!71;UBERON:0003075!5.25e-27!71;UBERON:0007284!5.25e-27!71;UBERON:0000033!8.31e-26!63;UBERON:0003056!1.03e-25!49;UBERON:0001049!1.49e-25!52;UBERON:0005068!1.49e-25!52;UBERON:0006241!1.49e-25!52;UBERON:0007135!1.49e-25!52;UBERON:0000955!5.18e-24!50;UBERON:0006238!5.18e-24!50;UBERON:0002616!2.99e-23!49;UBERON:0003080!2.27e-22!40;UBERON:0002020!4.31e-22!34;UBERON:0001017!4.57e-22!73;UBERON:0005743!4.57e-22!73;UBERON:0000073!7.22e-22!75;UBERON:0001016!7.22e-22!75;UBERON:0004121!1.10e-21!102;UBERON:0000924!1.10e-21!102;UBERON:0006601!1.10e-21!102;UBERON:0002780!1.11e-21!39;UBERON:0001890!1.11e-21!39;UBERON:0006240!1.11e-21!39;UBERON:0002791!6.07e-19!29;UBERON:0003528!6.07e-19!29;UBERON:0001893!6.07e-19!29;UBERON:0000153!7.89e-14!94;UBERON:0000956!8.16e-14!21;UBERON:0001869!8.16e-14!21;UBERON:0000203!8.16e-14!21;UBERON:0007811!4.61e-13!86;UBERON:0002619!2.71e-11!17;UBERON:0002021!2.26e-09!10;UBERON:0000411!2.26e-09!10;UBERON:0001950!2.26e-09!10
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.16e-32,64;UBERON:0003075,2.16e-32,64;UBERON:0007284,2.16e-32,64;UBERON:0000073,1.92e-31,54;UBERON:0003056,8.21e-31,49;UBERON:0001049,4.29e-30,52;UBERON:0005068,4.29e-30,52;UBERON:0006241,4.29e-30,52;UBERON:0007135,4.29e-30,52;UBERON:0002020,3.32e-28,34;UBERON:0003080,2.63e-26,40;UBERON:0000955,4.24e-26,47;UBERON:0006238,4.24e-26,47;UBERON:0010371,5.03e-26,73;UBERON:0001017,2.07e-25,73;UBERON:0002780,2.09e-25,39;UBERON:0001890,2.09e-25,39;UBERON:0006240,2.09e-25,39;UBERON:0002616,3.97e-25,46;UBERON:0001016,3.12e-24,75;UBERON:0003528,5.29e-24,29;UBERON:0002791,5.29e-24,29;UBERON:0001893,5.29e-24,29;UBERON:0004121,2.43e-23,95;UBERON:0000924,2.43e-23,95;UBERON:0006601,2.43e-23,95;UBERON:0000956,3.61e-17,21;UBERON:0001869,3.61e-17,21;UBERON:0000203,3.61e-17,21;UBERON:0010314,7.59e-17,92;UBERON:0002619,8.16e-14,17;UBERON:0002021,5.54e-12,10;UBERON:0000411,5.54e-12,10;UBERON:0001950,5.54e-12,10;UBERON:0002420,6.21e-08,8;UBERON:0007245,6.21e-08,8;UBERON:0010009,6.21e-08,8;UBERON:0010011,6.21e-08,8;UBERON:0000454,6.21e-08,8
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,0,0,0,0,0,0,2.89147186513637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388859798148567,0,0,0,0,0,0,0,0,8.29497489524351,6.34789175126439,5.70448263155561,0,0,0,0.988866362566974,0,0,0,7.05089363697648,4.3201900266141,7.15104868594699,3.42781181284564,4.41737081903227,8.81933754347669,7.57179221044067,5.51531271966013,3.30347642998166,4.08599481872601,4.91540906419979,9.89147157976454,8.87430142943374,9.37644067002168,2.51264699101243,7.31591393041184,5.95913166329559,7.66034322231536,13.6676813567139,10.2519695203915,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0.693941307064543,0.608930956624282,0,0.60289056221049,0.23517741427141,0.125666591329675,0,0,0,1.29413479957927,1.32504911076236,3.87900202508178,1.86391761218122,0.878342391034642,1.04723353406728,0,0,0,0,7.18995069143149,9.60751265919116,12.1884721549478,20.3374454624963,15.8543583544805,4.36354893575076,9.5722345209977,0.305518091550949,2.48813941220186,0,1.05220927943237,1.17108398666433,1.37941262660084,1.62055916824814,2.56198190320716,4.42237244483631,5.50888997224854,6.65282244374075,2.06962696591213,0.431135985865684,0.378212160335639,0.351902248327898,0.657587197282725,0.556094498451196,1.0447564995665,0.411564272815887,1.99034266818493,0,0,0,0.207125772535502,0.469052119962192,0,0.473489471170421,0.393528463494808,0,0.232533944750408,0,0,0,0,0,0,0,0,19.767255165028,13.377599609307,0,0,0.426576501070468,0.464473343720877,0,0,0.22237804384487,0.380451252225118,0,0,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0,0.189667900953082,0.228497025219458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0.189491411770485,0.488894929326078,0.169745085775188,0.469380496577004,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,3.37156238974363,5.15731421005694,0,0.504941854408746,0,0.390438744296638,0,0.238968797952552,0,0,0,0.292255857911312,0,9.63963949265421,0,0.35613120733451,0.81443479676788,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,3.74483566329167,1.62054984628179,0.517434735131018,1.92903331528433,1.59606210278046,1.42695054081656,1.15184314421485,0.608929898229199,0,0,0,0,0.322928853391811,0.0603129249281559,0.119372344003136,0,0,4.26478194624172,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.216010681643603,0.418176592028937,0,0.269728692769641,0.247960367176008,0,0.129614973291793,0,0,0.149516546043979,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.413832917768,19.3336599333014,22.3429250241365,18.0445841460872,17.1270629942661,17.3740596399631,23.6257875081132,18.0128481289688,19.938265995305,19.1571315348173,1.03787347584177,4.38927360741134,5.12200817262403,2.18796045361465,2.30574478890781,1.47074806760011,2.66696073361938,2.88449080134452,6.09746498224449,3.53776096469316,3.29523089857312,4.71565853465191,3.09016974650612,4.28968521112624,4.93945033018274,1.90517476513229,3.94006708212509,4.43691207066522,4.12085900803307,3.97437084362873,4.4573002810104,3.01708870470874,4.05341522910446,4.65108533223451,4.32903149910521,4.14611578669215,5.12198324043763,2.63069711437843,3.25929873230068,2.80571135828869,3.2031454893527,4.13718825977367,1.63692417267876,3.71848418846318,3.66522560864169,4.99621155875892,3.04111090979031,2.36358159453128,0.765153328275374,0.441182838239031,0.927471342481686
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,0,0,0,0,0,0,2.89147186513637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.388859798148567,0,0,0,0,0,0,0,0,8.29497489524351,6.34789175126439,5.70448263155561,0,0,0,0.988866362566974,0,0,0,7.05089363697648,4.3201900266141,7.15104868594699,3.42781181284564,4.41737081903227,8.81933754347669,7.57179221044067,5.51531271966013,3.30347642998166,4.08599481872601,4.91540906419979,9.89147157976454,8.87430142943374,9.37644067002168,2.51264699101243,7.31591393041184,5.95913166329559,7.66034322231536,13.6676813567139,10.2519695203915,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0.693941307064543,0.608930956624282,0,0.60289056221049,0.23517741427141,0.125666591329675,0,0,0,1.29413479957927,1.32504911076236,3.87900202508178,1.86391761218122,0.878342391034642,1.04723353406728,0,0,0,0,7.18995069143149,9.60751265919116,12.1884721549478,20.3374454624963,15.8543583544805,4.36354893575076,9.5722345209977,0.305518091550949,2.48813941220186,0,1.05220927943237,1.17108398666433,1.37941262660084,1.62055916824814,2.56198190320716,4.42237244483631,5.50888997224854,6.65282244374075,2.06962696591213,0.431135985865684,0.378212160335639,0.351902248327898,0.657587197282725,0.556094498451196,1.0447564995665,0.411564272815887,1.99034266818493,0,0,0,0.207125772535502,0.469052119962192,0,0.473489471170421,0.393528463494808,0,0.232533944750408,0,0,0,0,0,0,0,0,19.767255165028,13.377599609307,0,0,0.426576501070468,0.464473343720877,0,0,0.22237804384487,0.380451252225118,0,0,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0,0.189667900953082,0.228497025219458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0.189491411770485,0.488894929326078,0.169745085775188,0.469380496577004,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,3.37156238974363,5.15731421005694,0,0.504941854408746,0,0.390438744296638,0,0.238968797952552,0,0,0,0.292255857911312,0,9.63963949265421,0,0.35613120733451,0.81443479676788,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,3.74483566329167,1.62054984628179,0.517434735131018,1.92903331528433,1.59606210278046,1.42695054081656,1.15184314421485,0.608929898229199,0,0,0,0,0.322928853391811,0.0603129249281559,0.119372344003136,0,0,4.26478194624172,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.216010681643603,0.418176592028937,0,0.269728692769641,0.247960367176008,0,0.129614973291793,0,0,0.149516546043979,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.413832917768,19.3336599333014,22.3429250241365,18.0445841460872,17.1270629942661,17.3740596399631,23.6257875081132,18.0128481289688,19.938265995305,19.1571315348173,1.03787347584177,4.38927360741134,5.12200817262403,2.18796045361465,2.30574478890781,1.47074806760011,2.66696073361938,2.88449080134452,6.09746498224449,3.53776096469316,3.29523089857312,4.71565853465191,3.09016974650612,4.28968521112624,4.93945033018274,1.90517476513229,3.94006708212509,4.43691207066522,4.12085900803307,3.97437084362873,4.4573002810104,3.01708870470874,4.05341522910446,4.65108533223451,4.32903149910521,4.14611578669215,5.12198324043763,2.63069711437843,3.25929873230068,2.80571135828869,3.2031454893527,4.13718825977367,1.63692417267876,3.71848418846318,3.66522560864169,4.99621155875892,3.04111090979031,2.36358159453128,0.765153328275374,0.441182838239031,0.927471342481686
|short_description=p5@Magi2
|short_description=p5@Magi2
}}
}}

Revision as of 05:27, 15 November 2012

Short description:p5@Magi2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Magi2_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -98bp_to_ENSMUST00000115267_5end
EntrezGene:Magi2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Magi2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C38.29
Mouse Granule cells, donor2.CNhs12357.11731-123E36.35
Mouse Granule cells, donor3.CNhs12108.11636-122C75.70
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.05
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.32
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D97.15
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.42
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D28.82
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F27.57
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.09
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D49.89
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.87
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D89.38
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.96
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.66
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F613.67
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E110.25
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.29
bone (os femoris), neonate N16.CNhs11225.1525-43A61.33
bone (os femoris), neonate N20.CNhs11195.1350-25C33.88
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A47.19
corpus striatum, adult.CNhs10487.19-21D89.61
corpus striatum, neonate N00.CNhs11226.630-43F112.19
cortex, adult.CNhs10473.12-14D520.34
cortex, neonate N30.CNhs11107.1392-42F215.85
diencephalon, adult.CNhs10482.20-12F24.36
diencephalon, neonate N30.CNhs11201.1388-42B29.57
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.49
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C61.17
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D42.56
eyeball, neonate N00.CNhs11207.633-15C64.42
eyeball, neonate N01.CNhs11140.1532-43E75.51
eyeball, neonate N02.CNhs11205.1551-44G86.65
eyeball, neonate N16.CNhs11188.777-19A22.07
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I61.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E819.77
hippocampus, neonate N00.CNhs11228.627-43G113.38
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C23.37
medulla oblongata, neonate N30.CNhs11200.1396-42A35.16
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I99.64
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.74
pituitary gland, embryo E12.CNhs11018.346-16E61.62
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B91.60
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C94.26
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A125.41
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A219.33
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A322.34
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D718.04
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A417.13
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A517.37
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A623.63
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A718.01
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A819.94
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A919.16
whole body, embryo E11.CNhs11014.324-5I81.04
whole body, embryo E12.CNhs10587.857-27C94.39
whole body, embryo E13.CNhs10512.372-23H25.12
whole body, embryo E14.5.CNhs10578.420-27D22.19
whole body, embryo E14.CNhs10519.395-14B12.31
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.10
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.54
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.72
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.94
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.94
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.97
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.02
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.05
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.65
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.33
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.15
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.12
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.26
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.14
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.72
whole body, embryo E17.5.CNhs10513.490-9F93.67
whole body, embryo E17.CNhs10517.475-3I55.00
whole body, embryo E18.CNhs10516.493-3B33.04
whole body, neonate N00.CNhs10525.657-19C22.36
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)7.91e-1923
neuroblast (sensu Vertebrata)7.91e-1923
neuron1.24e-1033
neuronal stem cell1.24e-1033
neuroblast1.24e-1033
electrically signaling cell1.24e-1033
electrically responsive cell7.42e-0839
electrically active cell7.42e-0839

Uber anatomy
Ontology termp-valuen
neurectoderm2.16e-3264
neural plate2.16e-3264
presumptive neural plate2.16e-3264
regional part of nervous system1.92e-3154
pre-chordal neural plate8.21e-3149
neural tube4.29e-3052
neural rod4.29e-3052
future spinal cord4.29e-3052
neural keel4.29e-3052
gray matter3.32e-2834
anterior neural tube2.63e-2640
brain4.24e-2647
future brain4.24e-2647
ecto-epithelium5.03e-2673
central nervous system2.07e-2573
regional part of forebrain2.09e-2539
forebrain2.09e-2539
future forebrain2.09e-2539
regional part of brain3.97e-2546
nervous system3.12e-2475
brain grey matter5.29e-2429
regional part of telencephalon5.29e-2429
telencephalon5.29e-2429
ectoderm-derived structure2.43e-2395
ectoderm2.43e-2395
presumptive ectoderm2.43e-2395
cerebral cortex3.61e-1721
cerebral hemisphere3.61e-1721
pallium3.61e-1721
structure with developmental contribution from neural crest7.59e-1792
regional part of cerebral cortex8.16e-1417
occipital lobe5.54e-1210
visual cortex5.54e-1210
neocortex5.54e-1210
basal ganglion6.21e-088
nuclear complex of neuraxis6.21e-088
aggregate regional part of brain6.21e-088
collection of basal ganglia6.21e-088
cerebral subcortex6.21e-088







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:19413529..19413580,%2B&oldid=2364122"