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FFCP PHASE1:Mm9::chr1:189475390..189475413,+: Difference between revisions

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|id=chr1:189475390..189475413,+
|id=chr1:189475390..189475413,+
|ontology_enrichment_celltype=CL:0000117!1.03e-16!23;CL:0000337!1.03e-16!23;CL:0000540!9.70e-10!33;CL:0000047!9.70e-10!33;CL:0000031!9.70e-10!33;CL:0000404!9.70e-10!33;CL:0000393!1.01e-07!39;CL:0000211!1.01e-07!39
|ontology_enrichment_celltype=CL:0000117!1.03e-16!23;CL:0000337!1.03e-16!23;CL:0000540!9.70e-10!33;CL:0000047!9.70e-10!33;CL:0000031!9.70e-10!33;CL:0000404!9.70e-10!33;CL:0000393!1.01e-07!39;CL:0000211!1.01e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,1.09e-17,23;CL:0000337,1.09e-17,23;CL:0000540,3.03e-11,33;CL:0000047,3.03e-11,33;CL:0000031,3.03e-11,33;CL:0000404,3.03e-11,33;CL:0000393,5.53e-09,39;CL:0000211,5.53e-09,39;CL:0002610,6.16e-08,3;CL:0002319,7.80e-08,43;CL:0000221,1.40e-07,44;CL:0000133,1.40e-07,44;CL:0002613,8.88e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!1.78e-22!63;UBERON:0002346!8.24e-19!71;UBERON:0003075!8.24e-19!71;UBERON:0007284!8.24e-19!71;UBERON:0001049!1.37e-18!52;UBERON:0005068!1.37e-18!52;UBERON:0006241!1.37e-18!52;UBERON:0007135!1.37e-18!52;UBERON:0002020!4.28e-18!34;UBERON:0000955!2.51e-17!50;UBERON:0006238!2.51e-17!50;UBERON:0001017!1.10e-16!73;UBERON:0005743!1.10e-16!73;UBERON:0004121!1.32e-16!102;UBERON:0000924!1.32e-16!102;UBERON:0006601!1.32e-16!102;UBERON:0002616!1.56e-16!49;UBERON:0000073!9.18e-16!75;UBERON:0001016!9.18e-16!75;UBERON:0003056!5.28e-15!49;UBERON:0002791!3.20e-14!29;UBERON:0003528!3.20e-14!29;UBERON:0001893!3.20e-14!29;UBERON:0007811!9.43e-13!86;UBERON:0003080!5.70e-12!40;UBERON:0002780!2.70e-11!39;UBERON:0001890!2.70e-11!39;UBERON:0006240!2.70e-11!39;UBERON:0004111!1.37e-10!122;UBERON:0000153!3.11e-10!94;UBERON:0000025!3.34e-10!114;UBERON:0000956!1.62e-08!21;UBERON:0001869!1.62e-08!21;UBERON:0000203!1.62e-08!21;UBERON:0003076!8.02e-08!12;UBERON:0003057!8.02e-08!12;UBERON:0002420!1.92e-07!8;UBERON:0007245!1.92e-07!8;UBERON:0010009!1.92e-07!8;UBERON:0010011!1.92e-07!8;UBERON:0000454!1.92e-07!8;UBERON:0002619!4.46e-07!17
|ontology_enrichment_uberon=UBERON:0000033!1.78e-22!63;UBERON:0002346!8.24e-19!71;UBERON:0003075!8.24e-19!71;UBERON:0007284!8.24e-19!71;UBERON:0001049!1.37e-18!52;UBERON:0005068!1.37e-18!52;UBERON:0006241!1.37e-18!52;UBERON:0007135!1.37e-18!52;UBERON:0002020!4.28e-18!34;UBERON:0000955!2.51e-17!50;UBERON:0006238!2.51e-17!50;UBERON:0001017!1.10e-16!73;UBERON:0005743!1.10e-16!73;UBERON:0004121!1.32e-16!102;UBERON:0000924!1.32e-16!102;UBERON:0006601!1.32e-16!102;UBERON:0002616!1.56e-16!49;UBERON:0000073!9.18e-16!75;UBERON:0001016!9.18e-16!75;UBERON:0003056!5.28e-15!49;UBERON:0002791!3.20e-14!29;UBERON:0003528!3.20e-14!29;UBERON:0001893!3.20e-14!29;UBERON:0007811!9.43e-13!86;UBERON:0003080!5.70e-12!40;UBERON:0002780!2.70e-11!39;UBERON:0001890!2.70e-11!39;UBERON:0006240!2.70e-11!39;UBERON:0004111!1.37e-10!122;UBERON:0000153!3.11e-10!94;UBERON:0000025!3.34e-10!114;UBERON:0000956!1.62e-08!21;UBERON:0001869!1.62e-08!21;UBERON:0000203!1.62e-08!21;UBERON:0003076!8.02e-08!12;UBERON:0003057!8.02e-08!12;UBERON:0002420!1.92e-07!8;UBERON:0007245!1.92e-07!8;UBERON:0010009!1.92e-07!8;UBERON:0010011!1.92e-07!8;UBERON:0000454!1.92e-07!8;UBERON:0002619!4.46e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.72e-35,54;UBERON:0001017,1.66e-31,73;UBERON:0001049,2.97e-31,52;UBERON:0005068,2.97e-31,52;UBERON:0006241,2.97e-31,52;UBERON:0007135,2.97e-31,52;UBERON:0001016,1.90e-30,75;UBERON:0002346,9.85e-28,64;UBERON:0003075,9.85e-28,64;UBERON:0007284,9.85e-28,64;UBERON:0004121,2.95e-27,95;UBERON:0000924,2.95e-27,95;UBERON:0006601,2.95e-27,95;UBERON:0000955,3.38e-25,47;UBERON:0006238,3.38e-25,47;UBERON:0002020,9.34e-25,34;UBERON:0002616,1.35e-23,46;UBERON:0010371,2.22e-23,73;UBERON:0010314,9.57e-23,92;UBERON:0003528,6.16e-19,29;UBERON:0002791,6.16e-19,29;UBERON:0001893,6.16e-19,29;UBERON:0003080,4.11e-18,40;UBERON:0003056,5.67e-17,49;UBERON:0002780,9.56e-17,39;UBERON:0001890,9.56e-17,39;UBERON:0006240,9.56e-17,39;UBERON:0003076,8.91e-15,12;UBERON:0003057,8.91e-15,12;UBERON:0000025,1.74e-14,114;UBERON:0004111,3.09e-14,122;UBERON:0002021,3.09e-12,10;UBERON:0000411,3.09e-12,10;UBERON:0001950,3.09e-12,10;UBERON:0002420,3.49e-12,8;UBERON:0007245,3.49e-12,8;UBERON:0010009,3.49e-12,8;UBERON:0010011,3.49e-12,8;UBERON:0000454,3.49e-12,8;UBERON:0000369,2.40e-10,5;UBERON:0002435,2.40e-10,5;UBERON:0000204,2.40e-10,5;UBERON:0010082,2.40e-10,5;UBERON:0002619,3.75e-10,17;UBERON:0000956,1.49e-09,21;UBERON:0001869,1.49e-09,21;UBERON:0000203,1.49e-09,21;UBERON:0002240,1.95e-09,6;UBERON:0005174,1.95e-09,6;UBERON:0001137,1.95e-09,6;UBERON:0000483,3.48e-08,174;UBERON:0000119,5.33e-08,176;UBERON:0004684,6.16e-08,3;UBERON:0002275,6.16e-08,3;UBERON:0011216,1.60e-07,194;UBERON:0001948,2.36e-07,5;UBERON:0002315,2.36e-07,5;UBERON:0004733,5.77e-07,6;UBERON:0004732,5.77e-07,6;UBERON:0002028,5.77e-07,6;UBERON:0007277,5.77e-07,6
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,1.01158230429799,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0.270011876663381,0.210324961351382,3.42781181284564,2.42955395046775,1.10241719293459,0.862609239164127,0.919218786610021,5.50579404996943,3.70293280447044,3.84016333140609,3.03338461779446,2.37867873366265,1.04182674111352,3.07101298901519,0.56276261003168,2.13917546887534,0.589257170947335,2.70506193518296,2.60959224155421,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0.148442139064825,0,0.304465478312141,0,0,0,0.251333182659351,0,0.144599356919912,0,0.161766849947409,0.441683036920787,0.484875253135222,0,8.49064311333487,10.0534419270458,0,0,0,0,2.09706895166752,3.66000482254901,1.25654352112864,1.56441888173049,0.767146371990992,4.36354893575076,2.59586020908412,0.101839363850316,0,0,0.420883711772948,0.130120442962704,0.229902104433473,0,0.30140963567143,0.408218994907967,1.0249097622788,0.937017245597288,1.81092359517311,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0.469052119962192,0.180062061461015,0.710234206755631,0.787056926989615,0.154267112887378,0.232533944750408,0,0.467061369468678,0.987359099480883,1.97000956894914,1.05389452409612,2.48539978623065,0.878200461164203,1.47627060636409,1.05144974282064,0.823236899034275,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0.0701358198903186,0,0,0.627994911365499,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0.234690248288502,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,6.74312477948726,4.68846746368813,0,0.252470927204373,0,0,0,0,0,0,0,0,0,2.89189184779626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,5.93360966433631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436725127492355,0.134864346384821,0,0.26175594198403,0,4.97071450469541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,2.25900737046827,1.38097570952153,3.43737308063638,1.54667864109319,0,0,1.35004500046361,1.80128481289688,4.53142408984205,2.07104124700728,0,0,0.170733605754134,0.243106717068294,0.419226325255965,0,0,0.824140228955577,0.320919209591815,0.758091635291392,0.50695859978048,0.188626341386076,0.561849044819294,0.384150914429216,0.229741875822453,0,0.231768651889711,0.578727661391115,0,0.294397840268795,0,0,0.238436189947321,0.436039249896986,0.0941093804153306,0.423073039458382,0,0.526139422875686,0.271608227691724,0.561142271657738,0.237270036248348,0.197008964751127,0,0.309873682371932,0.385813221962283,0,0.701794825336225,0,0.382576664137687,0.220591419119515,0.463735671240843
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,1.01158230429799,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0.270011876663381,0.210324961351382,3.42781181284564,2.42955395046775,1.10241719293459,0.862609239164127,0.919218786610021,5.50579404996943,3.70293280447044,3.84016333140609,3.03338461779446,2.37867873366265,1.04182674111352,3.07101298901519,0.56276261003168,2.13917546887534,0.589257170947335,2.70506193518296,2.60959224155421,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0.148442139064825,0,0.304465478312141,0,0,0,0.251333182659351,0,0.144599356919912,0,0.161766849947409,0.441683036920787,0.484875253135222,0,8.49064311333487,10.0534419270458,0,0,0,0,2.09706895166752,3.66000482254901,1.25654352112864,1.56441888173049,0.767146371990992,4.36354893575076,2.59586020908412,0.101839363850316,0,0,0.420883711772948,0.130120442962704,0.229902104433473,0,0.30140963567143,0.408218994907967,1.0249097622788,0.937017245597288,1.81092359517311,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0.469052119962192,0.180062061461015,0.710234206755631,0.787056926989615,0.154267112887378,0.232533944750408,0,0.467061369468678,0.987359099480883,1.97000956894914,1.05389452409612,2.48539978623065,0.878200461164203,1.47627060636409,1.05144974282064,0.823236899034275,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0.0701358198903186,0,0,0.627994911365499,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0.234690248288502,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,6.74312477948726,4.68846746368813,0,0.252470927204373,0,0,0,0,0,0,0,0,0,2.89189184779626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,5.93360966433631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436725127492355,0.134864346384821,0,0.26175594198403,0,4.97071450469541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,2.25900737046827,1.38097570952153,3.43737308063638,1.54667864109319,0,0,1.35004500046361,1.80128481289688,4.53142408984205,2.07104124700728,0,0,0.170733605754134,0.243106717068294,0.419226325255965,0,0,0.824140228955577,0.320919209591815,0.758091635291392,0.50695859978048,0.188626341386076,0.561849044819294,0.384150914429216,0.229741875822453,0,0.231768651889711,0.578727661391115,0,0.294397840268795,0,0,0.238436189947321,0.436039249896986,0.0941093804153306,0.423073039458382,0,0.526139422875686,0.271608227691724,0.561142271657738,0.237270036248348,0.197008964751127,0,0.309873682371932,0.385813221962283,0,0.701794825336225,0,0.382576664137687,0.220591419119515,0.463735671240843
|short_description=p@chr1:189475390..189475413,+
|short_description=p@chr1:189475390..189475413,+
}}
}}

Revision as of 02:52, 15 November 2012

Short description:p@chr1:189475390..189475413, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr1:189475390..189475413, +
Coexpression cluster:MCL_coexpression_mm9:121
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p@chr1:189475390..189475413+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.43
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.10
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.86
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.70
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.03
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.38
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.07
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.14
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.61
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B28.49
cerebellum, neonate N30.CNhs11135.1395-42I210.05
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.10
corpus striatum, adult.CNhs10487.19-21D83.66
corpus striatum, neonate N00.CNhs11226.630-43F11.26
cortex, adult.CNhs10473.12-14D51.56
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F24.36
diencephalon, neonate N30.CNhs11201.1388-42B22.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.41
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G11.97
heart, neonate N16.CNhs11209.782-15G11.05
heart, neonate N20.CNhs11127.821-26I62.49
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D21.48
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G10.82
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C26.74
medulla oblongata, neonate N30.CNhs11200.1396-42A34.69
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C95.93
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C14.97
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.55
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system6.72e-3554
central nervous system1.66e-3173
neural tube2.97e-3152
neural rod2.97e-3152
future spinal cord2.97e-3152
neural keel2.97e-3152
nervous system1.90e-3075
neurectoderm9.85e-2864
neural plate9.85e-2864
presumptive neural plate9.85e-2864
ectoderm-derived structure2.95e-2795
ectoderm2.95e-2795
presumptive ectoderm2.95e-2795
brain3.38e-2547
future brain3.38e-2547
gray matter9.34e-2534
regional part of brain1.35e-2346
ecto-epithelium2.22e-2373
structure with developmental contribution from neural crest9.57e-2392
brain grey matter6.16e-1929
regional part of telencephalon6.16e-1929
telencephalon6.16e-1929
anterior neural tube4.11e-1840
pre-chordal neural plate5.67e-1749
regional part of forebrain9.56e-1739
forebrain9.56e-1739
future forebrain9.56e-1739
posterior neural tube8.91e-1512
chordal neural plate8.91e-1512
tube1.74e-14114
anatomical conduit3.09e-14122
occipital lobe3.09e-1210
visual cortex3.09e-1210
neocortex3.09e-1210
basal ganglion3.49e-128
nuclear complex of neuraxis3.49e-128
aggregate regional part of brain3.49e-128
collection of basal ganglia3.49e-128
cerebral subcortex3.49e-128
corpus striatum2.40e-105
striatum2.40e-105
ventral part of telencephalon2.40e-105
future corpus striatum2.40e-105
regional part of cerebral cortex3.75e-1017
cerebral cortex1.49e-0921
cerebral hemisphere1.49e-0921
pallium1.49e-0921
spinal cord1.95e-096
dorsal region element1.95e-096
dorsum1.95e-096
epithelium3.48e-08174
cell layer5.33e-08176
raphe nuclei6.16e-083
reticular formation6.16e-083
organ system subdivision1.60e-07194
regional part of spinal cord2.36e-075
gray matter of spinal cord2.36e-075
segmental subdivision of hindbrain5.77e-076
segmental subdivision of nervous system5.77e-076
hindbrain5.77e-076
presumptive hindbrain5.77e-076







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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