FFCP PHASE1:Mm9::chr15:79604838..79604904,-: Difference between revisions
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|id=chr15:79604838..79604904,- | |id=chr15:79604838..79604904,- | ||
|ontology_enrichment_celltype=CL:0000221!1.96e-12!44;CL:0000133!1.96e-12!44;CL:0002319!7.34e-12!43;CL:0000055!3.87e-11!50;CL:0000540!6.41e-08!33;CL:0000047!6.41e-08!33;CL:0000031!6.41e-08!33;CL:0000404!6.41e-08!33;CL:0000393!7.20e-08!39;CL:0000211!7.20e-08!39;CL:0000117!2.56e-07!23;CL:0000337!2.56e-07!23 | |ontology_enrichment_celltype=CL:0000221!1.96e-12!44;CL:0000133!1.96e-12!44;CL:0002319!7.34e-12!43;CL:0000055!3.87e-11!50;CL:0000540!6.41e-08!33;CL:0000047!6.41e-08!33;CL:0000031!6.41e-08!33;CL:0000404!6.41e-08!33;CL:0000393!7.20e-08!39;CL:0000211!7.20e-08!39;CL:0000117!2.56e-07!23;CL:0000337!2.56e-07!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.96e-12,44;CL:0000133,1.96e-12,44;CL:0002319,7.34e-12,43;CL:0000540,6.41e-08,33;CL:0000047,6.41e-08,33;CL:0000031,6.41e-08,33;CL:0000404,6.41e-08,33;CL:0000393,7.20e-08,39;CL:0000211,7.20e-08,39;CL:0000117,2.56e-07,23;CL:0000337,2.56e-07,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.21e-21!73;UBERON:0005743!1.21e-21!73;UBERON:0000073!3.08e-21!75;UBERON:0001016!3.08e-21!75;UBERON:0000033!8.99e-19!63;UBERON:0003056!1.23e-18!49;UBERON:0001049!4.88e-17!52;UBERON:0005068!4.88e-17!52;UBERON:0006241!4.88e-17!52;UBERON:0007135!4.88e-17!52;UBERON:0004121!7.00e-17!102;UBERON:0000924!7.00e-17!102;UBERON:0006601!7.00e-17!102;UBERON:0002780!8.69e-17!39;UBERON:0001890!8.69e-17!39;UBERON:0006240!8.69e-17!39;UBERON:0000955!1.32e-16!50;UBERON:0006238!1.32e-16!50;UBERON:0003080!1.91e-16!40;UBERON:0002346!2.86e-16!71;UBERON:0003075!2.86e-16!71;UBERON:0007284!2.86e-16!71;UBERON:0002616!5.22e-16!49;UBERON:0002791!1.82e-14!29;UBERON:0003528!1.82e-14!29;UBERON:0001893!1.82e-14!29;UBERON:0002020!2.35e-14!34;UBERON:0000153!1.76e-12!94;UBERON:0007811!1.52e-11!86;UBERON:0000956!1.78e-11!21;UBERON:0001869!1.78e-11!21;UBERON:0000203!1.78e-11!21;UBERON:0002619!4.14e-09!17 | |ontology_enrichment_uberon=UBERON:0001017!1.21e-21!73;UBERON:0005743!1.21e-21!73;UBERON:0000073!3.08e-21!75;UBERON:0001016!3.08e-21!75;UBERON:0000033!8.99e-19!63;UBERON:0003056!1.23e-18!49;UBERON:0001049!4.88e-17!52;UBERON:0005068!4.88e-17!52;UBERON:0006241!4.88e-17!52;UBERON:0007135!4.88e-17!52;UBERON:0004121!7.00e-17!102;UBERON:0000924!7.00e-17!102;UBERON:0006601!7.00e-17!102;UBERON:0002780!8.69e-17!39;UBERON:0001890!8.69e-17!39;UBERON:0006240!8.69e-17!39;UBERON:0000955!1.32e-16!50;UBERON:0006238!1.32e-16!50;UBERON:0003080!1.91e-16!40;UBERON:0002346!2.86e-16!71;UBERON:0003075!2.86e-16!71;UBERON:0007284!2.86e-16!71;UBERON:0002616!5.22e-16!49;UBERON:0002791!1.82e-14!29;UBERON:0003528!1.82e-14!29;UBERON:0001893!1.82e-14!29;UBERON:0002020!2.35e-14!34;UBERON:0000153!1.76e-12!94;UBERON:0007811!1.52e-11!86;UBERON:0000956!1.78e-11!21;UBERON:0001869!1.78e-11!21;UBERON:0000203!1.78e-11!21;UBERON:0002619!4.14e-09!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.21e-21,73;UBERON:0001016,3.08e-21,75;UBERON:0002346,4.80e-20,64;UBERON:0003075,4.80e-20,64;UBERON:0007284,4.80e-20,64;UBERON:0004121,8.57e-20,95;UBERON:0000924,8.57e-20,95;UBERON:0006601,8.57e-20,95;UBERON:0003056,1.23e-18,49;UBERON:0010371,3.29e-18,73;UBERON:0000955,1.20e-17,47;UBERON:0006238,1.20e-17,47;UBERON:0001049,4.88e-17,52;UBERON:0005068,4.88e-17,52;UBERON:0006241,4.88e-17,52;UBERON:0007135,4.88e-17,52;UBERON:0002616,4.91e-17,46;UBERON:0002780,8.69e-17,39;UBERON:0001890,8.69e-17,39;UBERON:0006240,8.69e-17,39;UBERON:0003080,1.91e-16,40;UBERON:0000073,2.67e-16,54;UBERON:0003528,1.82e-14,29;UBERON:0002791,1.82e-14,29;UBERON:0001893,1.82e-14,29;UBERON:0002020,2.35e-14,34;UBERON:0010314,6.80e-14,92;UBERON:0000956,1.78e-11,21;UBERON:0001869,1.78e-11,21;UBERON:0000203,1.78e-11,21;UBERON:0002619,4.14e-09,17 | |||
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| ||
|short_description=p1@Dnalc4 | |short_description=p1@Dnalc4 | ||
}} | }} |
Revision as of 00:55, 15 November 2012
Short description: | p1@Dnalc4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Dnalc4_5end |
Coexpression cluster: | MCL_coexpression_mm9:1511 |
Association with transcript: | 0bp_to_ENSMUST00000023055, NM_017470, uc007wuj.2_5end |
EntrezGene: | Dnalc4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.96e-12 | 44 |
neurectodermal cell | 1.96e-12 | 44 |
neural cell | 7.34e-12 | 43 |
neuron | 6.41e-08 | 33 |
neuronal stem cell | 6.41e-08 | 33 |
neuroblast | 6.41e-08 | 33 |
electrically signaling cell | 6.41e-08 | 33 |
electrically responsive cell | 7.20e-08 | 39 |
electrically active cell | 7.20e-08 | 39 |
CNS neuron (sensu Vertebrata) | 2.56e-07 | 23 |
neuroblast (sensu Vertebrata) | 2.56e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.21e-21 | 73 |
nervous system | 3.08e-21 | 75 |
neurectoderm | 4.80e-20 | 64 |
neural plate | 4.80e-20 | 64 |
presumptive neural plate | 4.80e-20 | 64 |
ectoderm-derived structure | 8.57e-20 | 95 |
ectoderm | 8.57e-20 | 95 |
presumptive ectoderm | 8.57e-20 | 95 |
pre-chordal neural plate | 1.23e-18 | 49 |
ecto-epithelium | 3.29e-18 | 73 |
brain | 1.20e-17 | 47 |
future brain | 1.20e-17 | 47 |
neural tube | 4.88e-17 | 52 |
neural rod | 4.88e-17 | 52 |
future spinal cord | 4.88e-17 | 52 |
neural keel | 4.88e-17 | 52 |
regional part of brain | 4.91e-17 | 46 |
regional part of forebrain | 8.69e-17 | 39 |
forebrain | 8.69e-17 | 39 |
future forebrain | 8.69e-17 | 39 |
anterior neural tube | 1.91e-16 | 40 |
regional part of nervous system | 2.67e-16 | 54 |
brain grey matter | 1.82e-14 | 29 |
regional part of telencephalon | 1.82e-14 | 29 |
telencephalon | 1.82e-14 | 29 |
gray matter | 2.35e-14 | 34 |
structure with developmental contribution from neural crest | 6.80e-14 | 92 |
cerebral cortex | 1.78e-11 | 21 |
cerebral hemisphere | 1.78e-11 | 21 |
pallium | 1.78e-11 | 21 |
regional part of cerebral cortex | 4.14e-09 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.