FFCP PHASE1:Mm9::chr12:90228593..90228596,+: Difference between revisions
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|id=chr12:90228593..90228596,+ | |id=chr12:90228593..90228596,+ | ||
|ontology_enrichment_celltype=CL:0000540!2.33e-08!33;CL:0000047!2.33e-08!33;CL:0000031!2.33e-08!33;CL:0000404!2.33e-08!33;CL:0000117!6.46e-08!23;CL:0000337!6.46e-08!23 | |ontology_enrichment_celltype=CL:0000540!2.33e-08!33;CL:0000047!2.33e-08!33;CL:0000031!2.33e-08!33;CL:0000404!2.33e-08!33;CL:0000117!6.46e-08!23;CL:0000337!6.46e-08!23 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.17e-18!63;UBERON:0003056!8.84e-18!49;UBERON:0002346!7.19e-17!71;UBERON:0003075!7.19e-17!71;UBERON:0007284!7.19e-17!71;UBERON:0002020!1.94e-15!34;UBERON:0001017!1.66e-14!73;UBERON:0005743!1.66e-14!73;UBERON:0001049!2.14e-14!52;UBERON:0005068!2.14e-14!52;UBERON:0006241!2.14e-14!52;UBERON:0007135!2.14e-14!52;UBERON:0000073!2.37e-14!75;UBERON:0001016!2.37e-14!75;UBERON:0004121!2.73e-14!102;UBERON:0000924!2.73e-14!102;UBERON:0006601!2.73e-14!102;UBERON:0000955!5.96e-14!50;UBERON:0006238!5.96e-14!50;UBERON:0002791!2.93e-13!29;UBERON:0003528!2.93e-13!29;UBERON:0001893!2.93e-13!29;UBERON:0002616!3.35e-13!49;UBERON:0003080!3.16e-12!40;UBERON:0002780!1.34e-11!39;UBERON:0001890!1.34e-11!39;UBERON:0006240!1.34e-11!39;UBERON:0007811!1.14e-09!86;UBERON:0000956!2.92e-09!21;UBERON:0001869!2.92e-09!21;UBERON:0000203!2.92e-09!21;UBERON:0002619!3.82e-08!17;UBERON:0000153!1.03e-07!94;UBERON:0000970!4.99e-07!9;UBERON:0000019!4.99e-07!9;UBERON:0000047!4.99e-07!9;UBERON:0004088!4.99e-07!9;UBERON:0002104!4.99e-07!9;UBERON:0001456!4.99e-07!9;UBERON:0003072!4.99e-07!9;UBERON:0003071!4.99e-07!9;UBERON:0004128!4.99e-07!9;UBERON:0002021!8.40e-07!10;UBERON:0000411!8.40e-07!10;UBERON:0001950!8.40e-07!10 | |ontology_enrichment_uberon=UBERON:0000033!1.17e-18!63;UBERON:0003056!8.84e-18!49;UBERON:0002346!7.19e-17!71;UBERON:0003075!7.19e-17!71;UBERON:0007284!7.19e-17!71;UBERON:0002020!1.94e-15!34;UBERON:0001017!1.66e-14!73;UBERON:0005743!1.66e-14!73;UBERON:0001049!2.14e-14!52;UBERON:0005068!2.14e-14!52;UBERON:0006241!2.14e-14!52;UBERON:0007135!2.14e-14!52;UBERON:0000073!2.37e-14!75;UBERON:0001016!2.37e-14!75;UBERON:0004121!2.73e-14!102;UBERON:0000924!2.73e-14!102;UBERON:0006601!2.73e-14!102;UBERON:0000955!5.96e-14!50;UBERON:0006238!5.96e-14!50;UBERON:0002791!2.93e-13!29;UBERON:0003528!2.93e-13!29;UBERON:0001893!2.93e-13!29;UBERON:0002616!3.35e-13!49;UBERON:0003080!3.16e-12!40;UBERON:0002780!1.34e-11!39;UBERON:0001890!1.34e-11!39;UBERON:0006240!1.34e-11!39;UBERON:0007811!1.14e-09!86;UBERON:0000956!2.92e-09!21;UBERON:0001869!2.92e-09!21;UBERON:0000203!2.92e-09!21;UBERON:0002619!3.82e-08!17;UBERON:0000153!1.03e-07!94;UBERON:0000970!4.99e-07!9;UBERON:0000019!4.99e-07!9;UBERON:0000047!4.99e-07!9;UBERON:0004088!4.99e-07!9;UBERON:0002104!4.99e-07!9;UBERON:0001456!4.99e-07!9;UBERON:0003072!4.99e-07!9;UBERON:0003071!4.99e-07!9;UBERON:0004128!4.99e-07!9;UBERON:0002021!8.40e-07!10;UBERON:0000411!8.40e-07!10;UBERON:0001950!8.40e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,7.62e-24,10;UBERON:0000411,7.62e-24,10;UBERON:0001950,7.62e-24,10;UBERON:0003056,7.13e-18,49;UBERON:0002020,4.10e-16,34;UBERON:0003528,1.18e-15,29;UBERON:0002791,1.18e-15,29;UBERON:0001893,1.18e-15,29;UBERON:0002346,1.96e-15,64;UBERON:0003075,1.96e-15,64;UBERON:0007284,1.96e-15,64;UBERON:0002619,9.21e-14,17;UBERON:0002780,1.10e-13,39;UBERON:0001890,1.10e-13,39;UBERON:0006240,1.10e-13,39;UBERON:0003080,2.65e-13,40;UBERON:0010371,2.92e-13,73;UBERON:0004121,7.97e-13,95;UBERON:0000924,7.97e-13,95;UBERON:0006601,7.97e-13,95;UBERON:0001049,6.00e-12,52;UBERON:0005068,6.00e-12,52;UBERON:0006241,6.00e-12,52;UBERON:0007135,6.00e-12,52;UBERON:0000073,1.94e-11,54;UBERON:0002616,2.33e-11,46;UBERON:0001017,3.78e-11,73;UBERON:0000955,4.40e-11,47;UBERON:0006238,4.40e-11,47;UBERON:0000956,5.22e-11,21;UBERON:0001869,5.22e-11,21;UBERON:0000203,5.22e-11,21;UBERON:0001016,8.53e-11,75;UBERON:0010314,4.66e-10,92 | |||
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| ||
|short_description=p@chr12:90228593..90228596,+ | |short_description=p@chr12:90228593..90228596,+ | ||
}} | }} |
Revision as of 23:40, 14 November 2012
Short description: | p@chr12:90228593..90228596, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:90228593..90228596, + |
Coexpression cluster: | MCL_coexpression_mm9:238 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 7.62e-24 | 10 |
visual cortex | 7.62e-24 | 10 |
neocortex | 7.62e-24 | 10 |
pre-chordal neural plate | 7.13e-18 | 49 |
gray matter | 4.10e-16 | 34 |
brain grey matter | 1.18e-15 | 29 |
regional part of telencephalon | 1.18e-15 | 29 |
telencephalon | 1.18e-15 | 29 |
neurectoderm | 1.96e-15 | 64 |
neural plate | 1.96e-15 | 64 |
presumptive neural plate | 1.96e-15 | 64 |
regional part of cerebral cortex | 9.21e-14 | 17 |
regional part of forebrain | 1.10e-13 | 39 |
forebrain | 1.10e-13 | 39 |
future forebrain | 1.10e-13 | 39 |
anterior neural tube | 2.65e-13 | 40 |
ecto-epithelium | 2.92e-13 | 73 |
ectoderm-derived structure | 7.97e-13 | 95 |
ectoderm | 7.97e-13 | 95 |
presumptive ectoderm | 7.97e-13 | 95 |
neural tube | 6.00e-12 | 52 |
neural rod | 6.00e-12 | 52 |
future spinal cord | 6.00e-12 | 52 |
neural keel | 6.00e-12 | 52 |
regional part of nervous system | 1.94e-11 | 54 |
regional part of brain | 2.33e-11 | 46 |
central nervous system | 3.78e-11 | 73 |
brain | 4.40e-11 | 47 |
future brain | 4.40e-11 | 47 |
cerebral cortex | 5.22e-11 | 21 |
cerebral hemisphere | 5.22e-11 | 21 |
pallium | 5.22e-11 | 21 |
nervous system | 8.53e-11 | 75 |
structure with developmental contribution from neural crest | 4.66e-10 | 92 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.