FFCP PHASE1:Mm9::chr2:102291983..102292000,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr2:102291983..102292000,- | |id=chr2:102291983..102292000,- | ||
|ontology_enrichment_celltype=CL:0000221!9.99e-16!44;CL:0000133!9.99e-16!44;CL:0002319!2.77e-15!43;CL:0000117!1.95e-12!23;CL:0000337!1.95e-12!23;CL:0000055!1.01e-11!50;CL:0000540!1.34e-11!33;CL:0000047!1.34e-11!33;CL:0000031!1.34e-11!33;CL:0000404!1.34e-11!33;CL:0000393!5.69e-09!39;CL:0000211!5.69e-09!39 | |ontology_enrichment_celltype=CL:0000221!9.99e-16!44;CL:0000133!9.99e-16!44;CL:0002319!2.77e-15!43;CL:0000117!1.95e-12!23;CL:0000337!1.95e-12!23;CL:0000055!1.01e-11!50;CL:0000540!1.34e-11!33;CL:0000047!1.34e-11!33;CL:0000031!1.34e-11!33;CL:0000404!1.34e-11!33;CL:0000393!5.69e-09!39;CL:0000211!5.69e-09!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,3.24e-18,44;CL:0000133,3.24e-18,44;CL:0002319,1.18e-17,43;CL:0000117,1.63e-15,23;CL:0000337,1.63e-15,23;CL:0000540,5.43e-13,33;CL:0000047,5.43e-13,33;CL:0000031,5.43e-13,33;CL:0000404,5.43e-13,33;CL:0000393,2.54e-09,39;CL:0000211,2.54e-09,39;CL:0002321,3.22e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.14e-26!75;UBERON:0001016!2.14e-26!75;UBERON:0001017!2.77e-26!73;UBERON:0005743!2.77e-26!73;UBERON:0001049!1.61e-20!52;UBERON:0005068!1.61e-20!52;UBERON:0006241!1.61e-20!52;UBERON:0007135!1.61e-20!52;UBERON:0004121!3.75e-20!102;UBERON:0000924!3.75e-20!102;UBERON:0006601!3.75e-20!102;UBERON:0002020!1.19e-19!34;UBERON:0000955!6.37e-19!50;UBERON:0006238!6.37e-19!50;UBERON:0002616!2.89e-18!49;UBERON:0000033!5.22e-18!63;UBERON:0002791!8.20e-17!29;UBERON:0003528!8.20e-17!29;UBERON:0001893!8.20e-17!29;UBERON:0003080!2.10e-16!40;UBERON:0002780!3.75e-16!39;UBERON:0001890!3.75e-16!39;UBERON:0006240!3.75e-16!39;UBERON:0002346!2.10e-15!71;UBERON:0003075!2.10e-15!71;UBERON:0007284!2.10e-15!71;UBERON:0003056!6.95e-15!49;UBERON:0000956!3.01e-13!21;UBERON:0001869!3.01e-13!21;UBERON:0000203!3.01e-13!21;UBERON:0000153!6.52e-13!94;UBERON:0007811!3.65e-11!86;UBERON:0002619!4.43e-11!17;UBERON:0002021!1.53e-07!10;UBERON:0000411!1.53e-07!10;UBERON:0001950!1.53e-07!10;UBERON:0000475!8.55e-07!200 | |ontology_enrichment_uberon=UBERON:0000073!2.14e-26!75;UBERON:0001016!2.14e-26!75;UBERON:0001017!2.77e-26!73;UBERON:0005743!2.77e-26!73;UBERON:0001049!1.61e-20!52;UBERON:0005068!1.61e-20!52;UBERON:0006241!1.61e-20!52;UBERON:0007135!1.61e-20!52;UBERON:0004121!3.75e-20!102;UBERON:0000924!3.75e-20!102;UBERON:0006601!3.75e-20!102;UBERON:0002020!1.19e-19!34;UBERON:0000955!6.37e-19!50;UBERON:0006238!6.37e-19!50;UBERON:0002616!2.89e-18!49;UBERON:0000033!5.22e-18!63;UBERON:0002791!8.20e-17!29;UBERON:0003528!8.20e-17!29;UBERON:0001893!8.20e-17!29;UBERON:0003080!2.10e-16!40;UBERON:0002780!3.75e-16!39;UBERON:0001890!3.75e-16!39;UBERON:0006240!3.75e-16!39;UBERON:0002346!2.10e-15!71;UBERON:0003075!2.10e-15!71;UBERON:0007284!2.10e-15!71;UBERON:0003056!6.95e-15!49;UBERON:0000956!3.01e-13!21;UBERON:0001869!3.01e-13!21;UBERON:0000203!3.01e-13!21;UBERON:0000153!6.52e-13!94;UBERON:0007811!3.65e-11!86;UBERON:0002619!4.43e-11!17;UBERON:0002021!1.53e-07!10;UBERON:0000411!1.53e-07!10;UBERON:0001950!1.53e-07!10;UBERON:0000475!8.55e-07!200 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.16e-29,75;UBERON:0001017,4.76e-29,73;UBERON:0004121,4.65e-25,95;UBERON:0000924,4.65e-25,95;UBERON:0006601,4.65e-25,95;UBERON:0000073,4.81e-24,54;UBERON:0002020,6.99e-24,34;UBERON:0001049,3.26e-23,52;UBERON:0005068,3.26e-23,52;UBERON:0006241,3.26e-23,52;UBERON:0007135,3.26e-23,52;UBERON:0002346,1.75e-20,64;UBERON:0003075,1.75e-20,64;UBERON:0007284,1.75e-20,64;UBERON:0003528,3.01e-20,29;UBERON:0002791,3.01e-20,29;UBERON:0001893,3.01e-20,29;UBERON:0000955,5.19e-20,47;UBERON:0006238,5.19e-20,47;UBERON:0010371,3.21e-19,73;UBERON:0002616,3.31e-19,46;UBERON:0003080,2.15e-18,40;UBERON:0002780,4.57e-18,39;UBERON:0001890,4.57e-18,39;UBERON:0006240,4.57e-18,39;UBERON:0000956,1.49e-16,21;UBERON:0001869,1.49e-16,21;UBERON:0000203,1.49e-16,21;UBERON:0003056,2.28e-16,49;UBERON:0002619,9.00e-14,17;UBERON:0010314,1.52e-10,92;UBERON:0002021,3.08e-09,10;UBERON:0000411,3.08e-09,10;UBERON:0001950,3.08e-09,10 | |||
|phase1_expression=3.52327463630547,0,0,0,0,0,0,0.258246646883153,0.563154888606667,0.936258105287974,0.856089841127525,0.398860794976682,0,0,0,0,0,0,0,0,0.850432901510698,0.0992909512008853,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.608261587317087,0.183546752161682,1.56478268869608,2.18025156380447,3.51497892375155,3.11087838518853,1.1198913730029,7.18762821824858,0,0,0,0.257259436035947,0.573066879877513,0,4.45096213891115,3.70293685490423,3.80298842103708,2.37191172448392,2.66788438833342,0,0,0,4.49400165777607,6.14749288514487,2.48855069540346,3.37514845829227,3.15487442027073,2.85650984403804,5.30084498283872,2.69479758272899,2.20444583341944,3.67687514644008,2.20231761998777,2.17068474744819,1.22885226604995,6.19865552331911,6.31264740856627,3.64639359389732,1.67509799400829,2.25105044012672,3.20876320331301,4.12480019663135,2.13557521198654,4.10078780815661,1.06016670666458,1.058001841495,0,0,0,0,0,0,0.140444420131752,0,0,0,2.25349471642689,1.28326477414318,0,0,1.5154372870785,0.760079596425296,0.505524445014783,0.11418387971906,0,0,0.693941307064543,0.304465478312141,0.230615497256059,0.301445281105245,0.23517741427141,0.376999773989026,0.247194967734374,0,0,1.13236794963186,1.10420759230197,0,0,0.585561594023094,2.51336048176146,0,0.239630249011841,0,0,1.64769703345305,0.915001205637253,5.27748278874031,5.73620256634512,4.34716277461562,2.70124457927428,2.27137768294861,2.03678727700633,0.373220911830279,1.76905930903572,0,0.910843100738926,1.37941262660084,1.26043490863744,1.05493372485001,1.7009124787832,0.768682321709099,1.21812241927647,0,1.94011193639558,1.32374256117473,2.63926686245923,5.47989331068937,1.66828349535359,1.39300866608867,2.05782136407943,1.79130840136644,0,0,0,0,0.469052119962192,0.720248245844059,0.946978942340841,0.393528463494808,0,0.232533944750408,0.536546802799238,0.116765342367169,0.329119699826961,0,0.162137619091711,0.146199987425332,0,0.134206418760372,2.94405927989778,4.93942139420565,0,0,1.91959425481711,1.62565670302307,1.9330119198314,1.00841762311671,0.889512175379481,0.190225626112559,0,0.494096864172033,0.502670417600539,0.795825888164603,0.38992817423824,0,0,0,1.70701110857774,1.25673363870702,1.1270773567308,0.610953983535943,0.775809948670503,0.98190147846446,0.822074982615345,0.147610147979602,0.156998727841375,0.493588655687202,0,1.00107063429656,0.393117990226406,0.449724224769707,0.608580364165509,0.241177159752417,0,0,0,0.274561413188081,0,0,0,0,0.179397413521912,0,0,1.32643988239339,0.814824882210129,1.01847051465113,0,0.335012514883631,2.14239276797412,0.975668239288994,1.89162172927429,0.44292937929755,2.07291199254733,1.14704320301017,1.20879487306127,1.3018415272336,0,0,0,0,1.28440471990234,1.05490517932983,0.163934945376675,0.252470927204373,2.2085575359138,0.390438744296638,0,1.19484398976276,0.891194696329576,0.566153061577665,0.809621403349789,2.04579100537918,1.58115111178609,4.81981974632711,0.141940085208269,2.49291845134157,1.46598263418218,1.48473110675282,0,2.18502572539483,2.41858845571801,2.64047111658257,2.06711325016541,2.15204603560749,0.775284879504663,1.45413491791002,1.42598951353889,1.8962205476149,1.05418608574999,2.06271086496374,0,0.720244376125241,1.55230420539305,1.50035924522115,1.06404140185364,0.713475270408282,0.987294123612726,1.2178597964584,0.23467170806371,0.42366414172764,0,0,0.645857706783622,1.14594557363496,1.55184047204077,0.984845398470368,0.874442509889552,1.8542530201051,0,0.206386867963223,0.185194527369712,0,0,0.228778173206523,0.169978429993855,0.279902904647316,0.276399947608848,0,1.73984796469624,1.82987520414164,1.18805874903981,0.627264888043406,0.436725127492355,1.07891477107857,1.23980183588004,0.26175594198403,0,0,0,1.34564891439581,1.48912641411388,0.777804753376191,0.645799117388655,0.675824501963113,0.352071715937262,1.3020438484395,0.314578033277133,0.241584120826006,0.288030006257865,0,1.82452693761148,0.821687657318618,0.909445760844565,0.537080087002444,0.198681354781265,0.841368146639782,0.443068581523732,0.201932899896295,0.0762068066549998,0.201652370273681,0.0974578807397524,0,0.233753804363138,1.58711268530648,0,0,0.167884616364078,0.772758376128762,0.93841237725591,0.36630324853453,1.07184189539533,0,6.21227026878773,5.9842280745933,4.58316410751517,6.35856774671644,7.53590771747707,3.0215755895588,5.40018000185445,3.60256962579376,4.07828168085784,2.5888015587591,0.726511433089237,2.79317411380722,2.39027048055788,2.18796045361465,1.67690530102386,0.735374033800057,0.666740183404846,0.618105171716683,1.28367683836726,1.01078884705519,0.25347929989024,1.13175804831646,0.936415074698824,1.15245274328765,0.689225627467359,1.42888107384922,1.0429589335037,0.578727661391115,0.824171801606613,0.441596760403192,1.02860775715625,0.70990322463735,0.476872379894642,0.436039249896986,0.846984423737976,0.761531471025089,1.46342378298218,0.526139422875686,0.679020569229309,3.36685362994643,1.18635018124174,0.886540341380071,0.409231043169689,0.619747364743864,1.15743966588685,2.24829520144151,2.10538447600868,1.28922632428979,0.956441660344217,0.441182838239031,0.927471342481686 | |phase1_expression=3.52327463630547,0,0,0,0,0,0,0.258246646883153,0.563154888606667,0.936258105287974,0.856089841127525,0.398860794976682,0,0,0,0,0,0,0,0,0.850432901510698,0.0992909512008853,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.608261587317087,0.183546752161682,1.56478268869608,2.18025156380447,3.51497892375155,3.11087838518853,1.1198913730029,7.18762821824858,0,0,0,0.257259436035947,0.573066879877513,0,4.45096213891115,3.70293685490423,3.80298842103708,2.37191172448392,2.66788438833342,0,0,0,4.49400165777607,6.14749288514487,2.48855069540346,3.37514845829227,3.15487442027073,2.85650984403804,5.30084498283872,2.69479758272899,2.20444583341944,3.67687514644008,2.20231761998777,2.17068474744819,1.22885226604995,6.19865552331911,6.31264740856627,3.64639359389732,1.67509799400829,2.25105044012672,3.20876320331301,4.12480019663135,2.13557521198654,4.10078780815661,1.06016670666458,1.058001841495,0,0,0,0,0,0,0.140444420131752,0,0,0,2.25349471642689,1.28326477414318,0,0,1.5154372870785,0.760079596425296,0.505524445014783,0.11418387971906,0,0,0.693941307064543,0.304465478312141,0.230615497256059,0.301445281105245,0.23517741427141,0.376999773989026,0.247194967734374,0,0,1.13236794963186,1.10420759230197,0,0,0.585561594023094,2.51336048176146,0,0.239630249011841,0,0,1.64769703345305,0.915001205637253,5.27748278874031,5.73620256634512,4.34716277461562,2.70124457927428,2.27137768294861,2.03678727700633,0.373220911830279,1.76905930903572,0,0.910843100738926,1.37941262660084,1.26043490863744,1.05493372485001,1.7009124787832,0.768682321709099,1.21812241927647,0,1.94011193639558,1.32374256117473,2.63926686245923,5.47989331068937,1.66828349535359,1.39300866608867,2.05782136407943,1.79130840136644,0,0,0,0,0.469052119962192,0.720248245844059,0.946978942340841,0.393528463494808,0,0.232533944750408,0.536546802799238,0.116765342367169,0.329119699826961,0,0.162137619091711,0.146199987425332,0,0.134206418760372,2.94405927989778,4.93942139420565,0,0,1.91959425481711,1.62565670302307,1.9330119198314,1.00841762311671,0.889512175379481,0.190225626112559,0,0.494096864172033,0.502670417600539,0.795825888164603,0.38992817423824,0,0,0,1.70701110857774,1.25673363870702,1.1270773567308,0.610953983535943,0.775809948670503,0.98190147846446,0.822074982615345,0.147610147979602,0.156998727841375,0.493588655687202,0,1.00107063429656,0.393117990226406,0.449724224769707,0.608580364165509,0.241177159752417,0,0,0,0.274561413188081,0,0,0,0,0.179397413521912,0,0,1.32643988239339,0.814824882210129,1.01847051465113,0,0.335012514883631,2.14239276797412,0.975668239288994,1.89162172927429,0.44292937929755,2.07291199254733,1.14704320301017,1.20879487306127,1.3018415272336,0,0,0,0,1.28440471990234,1.05490517932983,0.163934945376675,0.252470927204373,2.2085575359138,0.390438744296638,0,1.19484398976276,0.891194696329576,0.566153061577665,0.809621403349789,2.04579100537918,1.58115111178609,4.81981974632711,0.141940085208269,2.49291845134157,1.46598263418218,1.48473110675282,0,2.18502572539483,2.41858845571801,2.64047111658257,2.06711325016541,2.15204603560749,0.775284879504663,1.45413491791002,1.42598951353889,1.8962205476149,1.05418608574999,2.06271086496374,0,0.720244376125241,1.55230420539305,1.50035924522115,1.06404140185364,0.713475270408282,0.987294123612726,1.2178597964584,0.23467170806371,0.42366414172764,0,0,0.645857706783622,1.14594557363496,1.55184047204077,0.984845398470368,0.874442509889552,1.8542530201051,0,0.206386867963223,0.185194527369712,0,0,0.228778173206523,0.169978429993855,0.279902904647316,0.276399947608848,0,1.73984796469624,1.82987520414164,1.18805874903981,0.627264888043406,0.436725127492355,1.07891477107857,1.23980183588004,0.26175594198403,0,0,0,1.34564891439581,1.48912641411388,0.777804753376191,0.645799117388655,0.675824501963113,0.352071715937262,1.3020438484395,0.314578033277133,0.241584120826006,0.288030006257865,0,1.82452693761148,0.821687657318618,0.909445760844565,0.537080087002444,0.198681354781265,0.841368146639782,0.443068581523732,0.201932899896295,0.0762068066549998,0.201652370273681,0.0974578807397524,0,0.233753804363138,1.58711268530648,0,0,0.167884616364078,0.772758376128762,0.93841237725591,0.36630324853453,1.07184189539533,0,6.21227026878773,5.9842280745933,4.58316410751517,6.35856774671644,7.53590771747707,3.0215755895588,5.40018000185445,3.60256962579376,4.07828168085784,2.5888015587591,0.726511433089237,2.79317411380722,2.39027048055788,2.18796045361465,1.67690530102386,0.735374033800057,0.666740183404846,0.618105171716683,1.28367683836726,1.01078884705519,0.25347929989024,1.13175804831646,0.936415074698824,1.15245274328765,0.689225627467359,1.42888107384922,1.0429589335037,0.578727661391115,0.824171801606613,0.441596760403192,1.02860775715625,0.70990322463735,0.476872379894642,0.436039249896986,0.846984423737976,0.761531471025089,1.46342378298218,0.526139422875686,0.679020569229309,3.36685362994643,1.18635018124174,0.886540341380071,0.409231043169689,0.619747364743864,1.15743966588685,2.24829520144151,2.10538447600868,1.28922632428979,0.956441660344217,0.441182838239031,0.927471342481686 | ||
|short_description=p3@Fjx1 | |short_description=p3@Fjx1 | ||
}} | }} |
Revision as of 22:19, 14 November 2012
Short description: | p3@Fjx1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Fjx1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1085 |
Association with transcript: | -34bp_to_ENSMUST00000099678, NM_010218, uc008lhw.1_5end |
EntrezGene: | Fjx1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 3.24e-18 | 44 |
neurectodermal cell | 3.24e-18 | 44 |
neural cell | 1.18e-17 | 43 |
CNS neuron (sensu Vertebrata) | 1.63e-15 | 23 |
neuroblast (sensu Vertebrata) | 1.63e-15 | 23 |
neuron | 5.43e-13 | 33 |
neuronal stem cell | 5.43e-13 | 33 |
neuroblast | 5.43e-13 | 33 |
electrically signaling cell | 5.43e-13 | 33 |
electrically responsive cell | 2.54e-09 | 39 |
electrically active cell | 2.54e-09 | 39 |
embryonic cell | 3.22e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
nervous system | 3.16e-29 | 75 |
central nervous system | 4.76e-29 | 73 |
ectoderm-derived structure | 4.65e-25 | 95 |
ectoderm | 4.65e-25 | 95 |
presumptive ectoderm | 4.65e-25 | 95 |
regional part of nervous system | 4.81e-24 | 54 |
gray matter | 6.99e-24 | 34 |
neural tube | 3.26e-23 | 52 |
neural rod | 3.26e-23 | 52 |
future spinal cord | 3.26e-23 | 52 |
neural keel | 3.26e-23 | 52 |
neurectoderm | 1.75e-20 | 64 |
neural plate | 1.75e-20 | 64 |
presumptive neural plate | 1.75e-20 | 64 |
brain grey matter | 3.01e-20 | 29 |
regional part of telencephalon | 3.01e-20 | 29 |
telencephalon | 3.01e-20 | 29 |
brain | 5.19e-20 | 47 |
future brain | 5.19e-20 | 47 |
ecto-epithelium | 3.21e-19 | 73 |
regional part of brain | 3.31e-19 | 46 |
anterior neural tube | 2.15e-18 | 40 |
regional part of forebrain | 4.57e-18 | 39 |
forebrain | 4.57e-18 | 39 |
future forebrain | 4.57e-18 | 39 |
cerebral cortex | 1.49e-16 | 21 |
cerebral hemisphere | 1.49e-16 | 21 |
pallium | 1.49e-16 | 21 |
pre-chordal neural plate | 2.28e-16 | 49 |
regional part of cerebral cortex | 9.00e-14 | 17 |
structure with developmental contribution from neural crest | 1.52e-10 | 92 |
occipital lobe | 3.08e-09 | 10 |
visual cortex | 3.08e-09 | 10 |
neocortex | 3.08e-09 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.