FFCP PHASE1:Mm9::chr15:75911305..75911323,-: Difference between revisions
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|id=chr15:75911305..75911323,- | |id=chr15:75911305..75911323,- | ||
|ontology_enrichment_celltype=CL:0002319!2.95e-16!43;CL:0000221!8.96e-16!44;CL:0000133!8.96e-16!44;CL:0000117!6.08e-14!23;CL:0000337!6.08e-14!23;CL:0000540!1.55e-13!33;CL:0000047!1.55e-13!33;CL:0000031!1.55e-13!33;CL:0000404!1.55e-13!33;CL:0000055!7.02e-12!50;CL:0000393!1.40e-09!39;CL:0000211!1.40e-09!39 | |ontology_enrichment_celltype=CL:0002319!2.95e-16!43;CL:0000221!8.96e-16!44;CL:0000133!8.96e-16!44;CL:0000117!6.08e-14!23;CL:0000337!6.08e-14!23;CL:0000540!1.55e-13!33;CL:0000047!1.55e-13!33;CL:0000031!1.55e-13!33;CL:0000404!1.55e-13!33;CL:0000055!7.02e-12!50;CL:0000393!1.40e-09!39;CL:0000211!1.40e-09!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.95e-16,43;CL:0000221,8.96e-16,44;CL:0000133,8.96e-16,44;CL:0000117,6.08e-14,23;CL:0000337,6.08e-14,23;CL:0000540,1.55e-13,33;CL:0000047,1.55e-13,33;CL:0000031,1.55e-13,33;CL:0000404,1.55e-13,33;CL:0000393,1.40e-09,39;CL:0000211,1.40e-09,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.08e-30!73;UBERON:0005743!3.08e-30!73;UBERON:0000073!2.97e-28!75;UBERON:0001016!2.97e-28!75;UBERON:0001049!1.51e-23!52;UBERON:0005068!1.51e-23!52;UBERON:0006241!1.51e-23!52;UBERON:0007135!1.51e-23!52;UBERON:0002346!1.57e-22!71;UBERON:0003075!1.57e-22!71;UBERON:0007284!1.57e-22!71;UBERON:0000955!3.73e-22!50;UBERON:0006238!3.73e-22!50;UBERON:0002616!1.01e-21!49;UBERON:0004121!1.04e-21!102;UBERON:0000924!1.04e-21!102;UBERON:0006601!1.04e-21!102;UBERON:0000033!1.91e-20!63;UBERON:0003080!3.25e-19!40;UBERON:0003056!3.58e-19!49;UBERON:0002780!4.68e-19!39;UBERON:0001890!4.68e-19!39;UBERON:0006240!4.68e-19!39;UBERON:0000153!1.05e-17!94;UBERON:0002020!1.08e-17!34;UBERON:0007811!1.70e-17!86;UBERON:0002791!1.24e-14!29;UBERON:0003528!1.24e-14!29;UBERON:0001893!1.24e-14!29;UBERON:0000956!2.92e-10!21;UBERON:0001869!2.92e-10!21;UBERON:0000203!2.92e-10!21;UBERON:0002619!8.44e-09!17;UBERON:0000025!4.54e-08!114;UBERON:0000479!6.46e-08!349;UBERON:0004111!3.30e-07!122 | |ontology_enrichment_uberon=UBERON:0001017!3.08e-30!73;UBERON:0005743!3.08e-30!73;UBERON:0000073!2.97e-28!75;UBERON:0001016!2.97e-28!75;UBERON:0001049!1.51e-23!52;UBERON:0005068!1.51e-23!52;UBERON:0006241!1.51e-23!52;UBERON:0007135!1.51e-23!52;UBERON:0002346!1.57e-22!71;UBERON:0003075!1.57e-22!71;UBERON:0007284!1.57e-22!71;UBERON:0000955!3.73e-22!50;UBERON:0006238!3.73e-22!50;UBERON:0002616!1.01e-21!49;UBERON:0004121!1.04e-21!102;UBERON:0000924!1.04e-21!102;UBERON:0006601!1.04e-21!102;UBERON:0000033!1.91e-20!63;UBERON:0003080!3.25e-19!40;UBERON:0003056!3.58e-19!49;UBERON:0002780!4.68e-19!39;UBERON:0001890!4.68e-19!39;UBERON:0006240!4.68e-19!39;UBERON:0000153!1.05e-17!94;UBERON:0002020!1.08e-17!34;UBERON:0007811!1.70e-17!86;UBERON:0002791!1.24e-14!29;UBERON:0003528!1.24e-14!29;UBERON:0001893!1.24e-14!29;UBERON:0000956!2.92e-10!21;UBERON:0001869!2.92e-10!21;UBERON:0000203!2.92e-10!21;UBERON:0002619!8.44e-09!17;UBERON:0000025!4.54e-08!114;UBERON:0000479!6.46e-08!349;UBERON:0004111!3.30e-07!122 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.08e-30,73;UBERON:0001016,2.97e-28,75;UBERON:0000073,5.30e-25,54;UBERON:0002346,2.93e-24,64;UBERON:0003075,2.93e-24,64;UBERON:0007284,2.93e-24,64;UBERON:0001049,1.51e-23,52;UBERON:0005068,1.51e-23,52;UBERON:0006241,1.51e-23,52;UBERON:0007135,1.51e-23,52;UBERON:0004121,1.23e-22,95;UBERON:0000924,1.23e-22,95;UBERON:0006601,1.23e-22,95;UBERON:0000955,3.92e-21,47;UBERON:0006238,3.92e-21,47;UBERON:0002616,1.04e-20,46;UBERON:0003080,3.25e-19,40;UBERON:0003056,3.58e-19,49;UBERON:0010314,4.27e-19,92;UBERON:0002780,4.68e-19,39;UBERON:0001890,4.68e-19,39;UBERON:0006240,4.68e-19,39;UBERON:0002020,1.08e-17,34;UBERON:0010371,1.69e-17,73;UBERON:0003528,1.24e-14,29;UBERON:0002791,1.24e-14,29;UBERON:0001893,1.24e-14,29;UBERON:0000956,2.92e-10,21;UBERON:0001869,2.92e-10,21;UBERON:0000203,2.92e-10,21;UBERON:0002619,8.44e-09,17;UBERON:0000025,4.54e-08,114;UBERON:0000479,6.46e-08,349;UBERON:0004111,3.30e-07,122 | |||
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| ||
|short_description=p2@Puf60 | |short_description=p2@Puf60 | ||
}} | }} |
Revision as of 21:15, 14 November 2012
Short description: | p2@Puf60 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Puf60_5end |
Coexpression cluster: | MCL_coexpression_mm9:964 |
Association with transcript: | -5bp_to_NM_001164600, uc011zup.1_5end |
EntrezGene: | Puf60 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.95e-16 | 43 |
ectodermal cell | 8.96e-16 | 44 |
neurectodermal cell | 8.96e-16 | 44 |
CNS neuron (sensu Vertebrata) | 6.08e-14 | 23 |
neuroblast (sensu Vertebrata) | 6.08e-14 | 23 |
neuron | 1.55e-13 | 33 |
neuronal stem cell | 1.55e-13 | 33 |
neuroblast | 1.55e-13 | 33 |
electrically signaling cell | 1.55e-13 | 33 |
electrically responsive cell | 1.40e-09 | 39 |
electrically active cell | 1.40e-09 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.08e-30 | 73 |
nervous system | 2.97e-28 | 75 |
regional part of nervous system | 5.30e-25 | 54 |
neurectoderm | 2.93e-24 | 64 |
neural plate | 2.93e-24 | 64 |
presumptive neural plate | 2.93e-24 | 64 |
neural tube | 1.51e-23 | 52 |
neural rod | 1.51e-23 | 52 |
future spinal cord | 1.51e-23 | 52 |
neural keel | 1.51e-23 | 52 |
ectoderm-derived structure | 1.23e-22 | 95 |
ectoderm | 1.23e-22 | 95 |
presumptive ectoderm | 1.23e-22 | 95 |
brain | 3.92e-21 | 47 |
future brain | 3.92e-21 | 47 |
regional part of brain | 1.04e-20 | 46 |
anterior neural tube | 3.25e-19 | 40 |
pre-chordal neural plate | 3.58e-19 | 49 |
structure with developmental contribution from neural crest | 4.27e-19 | 92 |
regional part of forebrain | 4.68e-19 | 39 |
forebrain | 4.68e-19 | 39 |
future forebrain | 4.68e-19 | 39 |
gray matter | 1.08e-17 | 34 |
ecto-epithelium | 1.69e-17 | 73 |
brain grey matter | 1.24e-14 | 29 |
regional part of telencephalon | 1.24e-14 | 29 |
telencephalon | 1.24e-14 | 29 |
cerebral cortex | 2.92e-10 | 21 |
cerebral hemisphere | 2.92e-10 | 21 |
pallium | 2.92e-10 | 21 |
regional part of cerebral cortex | 8.44e-09 | 17 |
tube | 4.54e-08 | 114 |
tissue | 6.46e-08 | 349 |
anatomical conduit | 3.30e-07 | 122 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.