FFCP PHASE1:Mm9::chr5:65883638..65883674,-: Difference between revisions
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|id=chr5:65883638..65883674,- | |id=chr5:65883638..65883674,- | ||
|ontology_enrichment_celltype=CL:0000988!2.05e-07!32;CL:0002032!2.05e-07!32;CL:0000037!2.05e-07!32;CL:0000566!2.05e-07!32;CL:0000837!2.05e-07!32 | |ontology_enrichment_celltype=CL:0000988!2.05e-07!32;CL:0002032!2.05e-07!32;CL:0000037!2.05e-07!32;CL:0000566!2.05e-07!32;CL:0000837!2.05e-07!32 | ||
|ontology_enrichment_celltype_v019_2=CL:0000049,1.00e-18,19;CL:0000988,2.00e-15,32;CL:0002032,2.00e-15,32;CL:0000037,2.00e-15,32;CL:0000837,2.00e-15,32;CL:0002320,6.87e-12,46;CL:0000134,6.87e-12,46;CL:0000034,2.57e-11,97;CL:0000763,6.76e-11,16;CL:0000219,8.70e-10,54;CL:0000557,1.17e-08,7;CL:0000723,4.28e-08,91;CL:0000048,4.28e-08,91 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,9.42e-13,3;DOID:4045,9.42e-13,3 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.87e-12,46;UBERON:0002371,6.76e-11,16;UBERON:0002204,1.64e-10,32;UBERON:0001474,1.05e-07,22;UBERON:0004765,1.05e-07,22;UBERON:0001434,1.05e-07,22 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0.33575854382378,0,1.54947988129892,0.422366166455,0,0,0,0.513602189793617,0.699363219351979,0,0.202475267389826,0,2.05050407482854,1.64537320326887,2.12194825899015,0,0.794327609607082,0.783599367416806,0.159992422793407,0,0,0,0.215471232685889,0.190023419456374,0,0.221730510655305,0.635030673459631,0,0,0,0.332469290716985,0,2.92972141515835,1.5626706890476,2.61761871986899,1.76469446409304,6.14740936462601,1.45653105909346,0.125896817975577,0,0,0,0.218025156380447,0.219686182734472,0,0.139986421625363,0,9.56360854529097,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0.135005938331691,0,0.571301968807607,0.220868540951614,0,0,0,0,0,0,0.131886287730194,0.457438218012048,0,0,0,0.15279824777681,0.294628585473668,0,0,0.075726193333184,0.302286240427142,1.15945795480671,0,0,0,0,0,0,0,0.259786004602869,0.35333957451034,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0,0,0,0.117588707135705,0.125666591329675,0,0.144599356919912,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0.41889341362691,0,1.91704199209472,1.79970819298022,2.54140454146129,0,0,0,0.173824320192276,0.255715457330331,0,0.162241263067758,0.203678727700633,0.248813941220186,0,0,0.130120442962704,0,0,0,0.204109497453984,0,0,0.258703370739016,0,0,0.175951124163949,0,0,0.348252166522167,0,0,1.40442637462647,1.54408744268829,1.70498099637356,0,0.234526059981096,0,0,0,0,0,0,0.350296027101508,0.16455984991348,0.32833492815819,0.162137619091711,0.292399974850665,0,0.134206418760372,0.420579897128254,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0.482443521363367,0,0,0,0,0.469380496577004,0.167506257441816,0,0,0,0.221464689648775,0.318909537314974,0.163863314715738,0.172684981865896,0,1.50791283939272,0,0,0,0.160550589987792,0.234423373184406,0,0,0,0,0,0.238968797952552,0.445597348164788,0.283076530788832,0,0.292255857911312,0.395287777946524,0,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0.363533729477506,0,0,2.10837217149998,0,0,0,0,0.214337035031592,0.177340233642274,0,0.164549020602121,0,0,0,0,0,0.322928853391811,0,0.119372344003136,0,0,0.18542530201051,0.170870880797853,0,0,0,0.410082683163076,0.228778173206523,1.18984900995699,3.35883485576779,2.76399947608848,0,0,0,0.108005340821801,0.209088296014469,0,0.134864346384821,0,0.26175594198403,0,0,0,0,0,0,0,0,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0,0.171853182343688,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0,0.249810577937946,0.467863216890817,0,0,0,0 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|phase1_expression=0.320297694209588,0,0,0,0,0.33575854382378,0,1.54947988129892,0.422366166455,0,0,0,0.513602189793617,0.699363219351979,0,0.202475267389826,0,2.05050407482854,1.64537320326887,2.12194825899015,0,0.794327609607082,0.783599367416806,0.159992422793407,0,0,0,0.215471232685889,0.190023419456374,0,0.221730510655305,0.635030673459631,0,0,0,0.332469290716985,0,2.92972141515835,1.5626706890476,2.61761871986899,1.76469446409304,6.14740936462601,1.45653105909346,0.125896817975577,0,0,0,0.218025156380447,0.219686182734472,0,0.139986421625363,0,9.56360854529097,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0.135005938331691,0,0.571301968807607,0.220868540951614,0,0,0,0,0,0,0.131886287730194,0.457438218012048,0,0,0,0.15279824777681,0.294628585473668,0,0,0.075726193333184,0.302286240427142,1.15945795480671,0,0,0,0,0,0,0,0.259786004602869,0.35333957451034,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0,0,0,0.117588707135705,0.125666591329675,0,0.144599356919912,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0,0.41889341362691,0,1.91704199209472,1.79970819298022,2.54140454146129,0,0,0,0.173824320192276,0.255715457330331,0,0.162241263067758,0.203678727700633,0.248813941220186,0,0,0.130120442962704,0,0,0,0.204109497453984,0,0,0.258703370739016,0,0,0.175951124163949,0,0,0.348252166522167,0,0,1.40442637462647,1.54408744268829,1.70498099637356,0,0.234526059981096,0,0,0,0,0,0,0.350296027101508,0.16455984991348,0.32833492815819,0.162137619091711,0.292399974850665,0,0.134206418760372,0.420579897128254,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0.482443521363367,0,0,0,0,0.469380496577004,0.167506257441816,0,0,0,0.221464689648775,0.318909537314974,0.163863314715738,0.172684981865896,0,1.50791283939272,0,0,0,0.160550589987792,0.234423373184406,0,0,0,0,0,0.238968797952552,0.445597348164788,0.283076530788832,0,0.292255857911312,0.395287777946524,0,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0.363533729477506,0,0,2.10837217149998,0,0,0,0,0.214337035031592,0.177340233642274,0,0.164549020602121,0,0,0,0,0,0.322928853391811,0,0.119372344003136,0,0,0.18542530201051,0.170870880797853,0,0,0,0.410082683163076,0.228778173206523,1.18984900995699,3.35883485576779,2.76399947608848,0,0,0,0.108005340821801,0.209088296014469,0,0.134864346384821,0,0.26175594198403,0,0,0,0,0,0,0,0,0.117357238645754,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0,0.171853182343688,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0,0.249810577937946,0.467863216890817,0,0,0,0 | ||
|short_description=p@chr5:65883638..65883674,- | |short_description=p@chr5:65883638..65883674,- | ||
}} | }} |
Revision as of 20:55, 14 November 2012
Short description: | p@chr5:65883638..65883674, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:65883638..65883674, - |
Coexpression cluster: | MCL_coexpression_mm9:440 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 1.00e-18 | 19 |
hematopoietic cell | 2.00e-15 | 32 |
hematopoietic oligopotent progenitor cell | 2.00e-15 | 32 |
hematopoietic stem cell | 2.00e-15 | 32 |
hematopoietic multipotent progenitor cell | 2.00e-15 | 32 |
connective tissue cell | 6.87e-12 | 46 |
mesenchymal cell | 6.87e-12 | 46 |
stem cell | 2.57e-11 | 97 |
myeloid cell | 6.76e-11 | 16 |
motile cell | 8.70e-10 | 54 |
granulocyte monocyte progenitor cell | 1.17e-08 | 7 |
somatic stem cell | 4.28e-08 | 91 |
multi fate stem cell | 4.28e-08 | 91 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 6.87e-12 | 46 |
bone marrow | 6.76e-11 | 16 |
musculoskeletal system | 1.64e-10 | 32 |
bone element | 1.05e-07 | 22 |
skeletal element | 1.05e-07 | 22 |
skeletal system | 1.05e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 9.42e-13 | 3 |
muscle cancer | 9.42e-13 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.