Personal tools

FFCP PHASE1:Mm9::chr3:107499123..107499134,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 8: Line 8:
|id=chr3:107499123..107499134,-
|id=chr3:107499123..107499134,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!3.41e-09!63;UBERON:0000955!5.83e-09!50;UBERON:0006238!5.83e-09!50;UBERON:0002616!7.46e-09!49;UBERON:0001049!1.79e-08!52;UBERON:0005068!1.79e-08!52;UBERON:0006241!1.79e-08!52;UBERON:0007135!1.79e-08!52;UBERON:0002346!3.59e-07!71;UBERON:0003075!3.59e-07!71;UBERON:0007284!3.59e-07!71;UBERON:0004111!3.76e-07!122
|ontology_enrichment_uberon=UBERON:0000033!3.41e-09!63;UBERON:0000955!5.83e-09!50;UBERON:0006238!5.83e-09!50;UBERON:0002616!7.46e-09!49;UBERON:0001049!1.79e-08!52;UBERON:0005068!1.79e-08!52;UBERON:0006241!1.79e-08!52;UBERON:0007135!1.79e-08!52;UBERON:0002346!3.59e-07!71;UBERON:0003075!3.59e-07!71;UBERON:0007284!3.59e-07!71;UBERON:0004111!3.76e-07!122
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.45e-15,54;UBERON:0001049,2.82e-13,52;UBERON:0005068,2.82e-13,52;UBERON:0006241,2.82e-13,52;UBERON:0007135,2.82e-13,52;UBERON:0002021,2.02e-11,10;UBERON:0000411,2.02e-11,10;UBERON:0001950,2.02e-11,10;UBERON:0002616,3.46e-11,46;UBERON:0002346,4.90e-11,64;UBERON:0003075,4.90e-11,64;UBERON:0007284,4.90e-11,64;UBERON:0000955,8.60e-11,47;UBERON:0006238,8.60e-11,47;UBERON:0002020,4.38e-10,34;UBERON:0001017,1.03e-09,73;UBERON:0010314,2.38e-09,92;UBERON:0001016,3.27e-09,75;UBERON:0003528,4.68e-09,29;UBERON:0002791,4.68e-09,29;UBERON:0001893,4.68e-09,29;UBERON:0010371,1.35e-08,73;UBERON:0003080,2.04e-08,40;UBERON:0002619,2.16e-08,17;UBERON:0004111,6.22e-08,122;UBERON:0002780,1.32e-07,39;UBERON:0001890,1.32e-07,39;UBERON:0006240,1.32e-07,39;UBERON:0000956,1.77e-07,21;UBERON:0001869,1.77e-07,21;UBERON:0000203,1.77e-07,21;UBERON:0003056,1.81e-07,49;UBERON:0000025,2.45e-07,114;UBERON:0004121,2.47e-07,95;UBERON:0000924,2.47e-07,95;UBERON:0006601,2.47e-07,95
|phase1_expression=0.320297694209588,1.04692622291808,1.81999695755814,1.81478526784098,0.500895729946347,0.33575854382378,0.934450562382103,0.129123323441576,0.281577444303333,0.70219357896598,0,0.0797721589953364,0,0.174840804837995,0,0,0.699561878128147,0.157731082679119,0,0,0.595303031057488,0.0992909512008853,0.783599367416806,0.95995453676044,1.83527424853736,1.14846392823004,0.430761996159075,1.07735616342945,1.71021077510736,0.504060259519861,0.443461021310609,0.635030673459631,0,0,0.866554859253824,0.166234645358492,0.612508068787107,0,0,1.0470474879476,0,0,0,1.00717454380462,1.62203089951223,0.917733760808408,0.782391344348039,0.218025156380447,0.219686182734472,1.36100929351998,0.699932108126813,0,0,0,0,0.771778308107841,1.14613375975503,1.54701627683233,0.606949382578793,0,0,0,0,0,0,1.4209602298922,0,0,0.103689612308478,0.540023753326763,0,1.14260393761521,1.98781686856452,0,0.191690942036473,0,4.40463523997555,2.68143409978894,3.5329502648936,0.263772575460388,0.457438218012048,0,3.07101298901519,4.50210088025344,2.90316670775939,0.294628585473668,1.28134512719193,0.186399445825301,0.37863096666592,0.151143120213571,0.869593466105033,1.72084775396277,0.679971333707751,0.539703191637817,0.649776417447669,0.448026887097336,0.561777680527007,0.511290967734173,0.779358013808606,0.35333957451034,0.422530259330042,3.84979432242953,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.5709193985953,0.258937883647172,1.03909497345377,0.346970653532272,0.304465478312141,0.230615497256059,0.150722640552623,0.705532242814229,0.879666139307728,0.247194967734374,4.916378135277,0,0.485300549842228,0.662524555381181,0.484875253135222,0,6.73395833126558,6.0739544975902,1.02182822083437,0.239630249011841,0,0.127070227073065,5.84183493678809,3.20250421973039,0.376963056338593,2.25971616249959,4.09144731728529,6.44142938134636,4.38051410282946,0.712875546952214,0.622034853050465,0.505445516867349,1.26265113531884,0,0.459804208866946,0.180062129805349,0.452114453507145,0.748401490664606,0.768682321709099,0.281105173679186,2.84573707812917,0,0.378212160335639,0.175951124163949,0,0.278047249225598,0,0.61734640922383,0.199034266818493,0,0,0.284163499395593,0.414251545071004,0.234526059981096,0.540186184383045,0.473489471170421,0.590292695242212,0.308534225774757,0.465067889500816,0.268273401399619,1.5179494507732,1.81015834904829,0.656669856316381,1.54030738137126,0.877199924551994,0.878200461164203,1.07365135008297,2.94405927989778,0.617427674275707,3.63460661282178,0.528901133327089,0.213288250535234,0.464473343720877,0.38660238396628,0.201683524623343,0.444756087689741,0,0.949058123089023,0.658795818896044,1.00534083520108,0.994782360205754,1.16978452271472,0.898819408654221,1.51296634912286,1.39398891278057,0,0.114248512609729,0,0.407302655690628,0.775809948670503,0.98190147846446,1.51767689098217,1.47610147979602,1.72698600625512,2.71473760627961,0.592905254174298,0,0.196558995113203,0.224862112384854,0,0,0,0.287696137450811,0,0,0,0,0.312037673114561,0,0.179397413521912,0,0.184753190166605,0,0.162964976442026,0,0.704070744865506,0.502518772325447,0.238043640886014,0,0.630540576424764,0.221464689648775,0.478364305972461,0.491589944147214,0.172684981865896,1.15719246865209,0,0.54390568381871,0,0.827810238914197,5.9403718295483,6.21221938938677,0.819674726883377,0.252470927204373,0.315508219416257,0,0,0.238968797952552,0.668396022247182,0.283076530788832,0,0.292255857911312,0.790575555893047,0.642642632843614,0.851640511249612,0,0.488660878060728,1.15479086080775,0,0.242780636154981,0,0,0,0.307435147943927,0.775284879504663,1.09060118843252,0,0,1.05418608574999,0,0.680879211507576,0.540183282093931,0,0.643011105094777,0.532020700926821,0.535106452806212,0.164549020602121,0.913394847343798,0,0.21183207086382,0.220528398054962,0.32977250588296,0.968786560175433,0.361877549568935,0.477489376012546,0.164140899745061,1.1659233465194,6.67531087237835,0,0,0.555583582109135,0,0,0,0.339956859987711,0.559805809294632,0.276399947608848,0.954670618015114,0.158167996790568,0.203319467126849,0.324016022465404,0.418176592028937,0.436725127492355,0.404593039154462,1.48776220305605,2.09404753587224,1.68499465279331,1.86401793926078,0.56369293868419,0,0,0.777804753376191,0.258319646955462,0.168956125490778,0.821500670520278,0.5208175393758,0.104859344425711,0.724752362478018,0.576060012515731,0.316011120628178,0,0.205421914329655,0.25984164595559,0.358053391334963,0.39736270956253,0.120195449519969,0.147689527174577,0,0.304827226619999,0.201652370273681,0,0,0.116876902181569,0.680191150845634,0.221985953374065,0,0,1.54551675225752,0,0.183151624267265,0.214368379079066,1.50471631210609,4.51801474093653,1.84130094602871,1.14579102687879,1.89038500578056,2.05524755931193,2.2661816921691,2.70009000092722,1.80128481289688,2.26571204492102,2.07104124700728,0,0,0.170733605754134,0.243106717068294,0.209613162627982,0.183843508450014,0.44449345560323,0.412070114477788,0.64183841918363,0,0.760437899670719,0.754505365544305,0.280924522409647,0.320125762024346,0.229741875822453,0,0.347652977834566,0.192909220463705,0,0.441596760403192,0.342869252385415,0.354951612318675,0.476872379894642,0.290692833264657,0.470546902076653,0.507687647350059,0.182927972872773,0.263069711437843,0.135804113845862,0,0.237270036248348,0.197008964751127,0.409231043169689,0.619747364743864,0,0.249810577937946,1.16965804222704,1.07435527024149,2.29545998482612,0.882365676478062,0.463735671240843
|phase1_expression=0.320297694209588,1.04692622291808,1.81999695755814,1.81478526784098,0.500895729946347,0.33575854382378,0.934450562382103,0.129123323441576,0.281577444303333,0.70219357896598,0,0.0797721589953364,0,0.174840804837995,0,0,0.699561878128147,0.157731082679119,0,0,0.595303031057488,0.0992909512008853,0.783599367416806,0.95995453676044,1.83527424853736,1.14846392823004,0.430761996159075,1.07735616342945,1.71021077510736,0.504060259519861,0.443461021310609,0.635030673459631,0,0,0.866554859253824,0.166234645358492,0.612508068787107,0,0,1.0470474879476,0,0,0,1.00717454380462,1.62203089951223,0.917733760808408,0.782391344348039,0.218025156380447,0.219686182734472,1.36100929351998,0.699932108126813,0,0,0,0,0.771778308107841,1.14613375975503,1.54701627683233,0.606949382578793,0,0,0,0,0,0,1.4209602298922,0,0,0.103689612308478,0.540023753326763,0,1.14260393761521,1.98781686856452,0,0.191690942036473,0,4.40463523997555,2.68143409978894,3.5329502648936,0.263772575460388,0.457438218012048,0,3.07101298901519,4.50210088025344,2.90316670775939,0.294628585473668,1.28134512719193,0.186399445825301,0.37863096666592,0.151143120213571,0.869593466105033,1.72084775396277,0.679971333707751,0.539703191637817,0.649776417447669,0.448026887097336,0.561777680527007,0.511290967734173,0.779358013808606,0.35333957451034,0.422530259330042,3.84979432242953,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.5709193985953,0.258937883647172,1.03909497345377,0.346970653532272,0.304465478312141,0.230615497256059,0.150722640552623,0.705532242814229,0.879666139307728,0.247194967734374,4.916378135277,0,0.485300549842228,0.662524555381181,0.484875253135222,0,6.73395833126558,6.0739544975902,1.02182822083437,0.239630249011841,0,0.127070227073065,5.84183493678809,3.20250421973039,0.376963056338593,2.25971616249959,4.09144731728529,6.44142938134636,4.38051410282946,0.712875546952214,0.622034853050465,0.505445516867349,1.26265113531884,0,0.459804208866946,0.180062129805349,0.452114453507145,0.748401490664606,0.768682321709099,0.281105173679186,2.84573707812917,0,0.378212160335639,0.175951124163949,0,0.278047249225598,0,0.61734640922383,0.199034266818493,0,0,0.284163499395593,0.414251545071004,0.234526059981096,0.540186184383045,0.473489471170421,0.590292695242212,0.308534225774757,0.465067889500816,0.268273401399619,1.5179494507732,1.81015834904829,0.656669856316381,1.54030738137126,0.877199924551994,0.878200461164203,1.07365135008297,2.94405927989778,0.617427674275707,3.63460661282178,0.528901133327089,0.213288250535234,0.464473343720877,0.38660238396628,0.201683524623343,0.444756087689741,0,0.949058123089023,0.658795818896044,1.00534083520108,0.994782360205754,1.16978452271472,0.898819408654221,1.51296634912286,1.39398891278057,0,0.114248512609729,0,0.407302655690628,0.775809948670503,0.98190147846446,1.51767689098217,1.47610147979602,1.72698600625512,2.71473760627961,0.592905254174298,0,0.196558995113203,0.224862112384854,0,0,0,0.287696137450811,0,0,0,0,0.312037673114561,0,0.179397413521912,0,0.184753190166605,0,0.162964976442026,0,0.704070744865506,0.502518772325447,0.238043640886014,0,0.630540576424764,0.221464689648775,0.478364305972461,0.491589944147214,0.172684981865896,1.15719246865209,0,0.54390568381871,0,0.827810238914197,5.9403718295483,6.21221938938677,0.819674726883377,0.252470927204373,0.315508219416257,0,0,0.238968797952552,0.668396022247182,0.283076530788832,0,0.292255857911312,0.790575555893047,0.642642632843614,0.851640511249612,0,0.488660878060728,1.15479086080775,0,0.242780636154981,0,0,0,0.307435147943927,0.775284879504663,1.09060118843252,0,0,1.05418608574999,0,0.680879211507576,0.540183282093931,0,0.643011105094777,0.532020700926821,0.535106452806212,0.164549020602121,0.913394847343798,0,0.21183207086382,0.220528398054962,0.32977250588296,0.968786560175433,0.361877549568935,0.477489376012546,0.164140899745061,1.1659233465194,6.67531087237835,0,0,0.555583582109135,0,0,0,0.339956859987711,0.559805809294632,0.276399947608848,0.954670618015114,0.158167996790568,0.203319467126849,0.324016022465404,0.418176592028937,0.436725127492355,0.404593039154462,1.48776220305605,2.09404753587224,1.68499465279331,1.86401793926078,0.56369293868419,0,0,0.777804753376191,0.258319646955462,0.168956125490778,0.821500670520278,0.5208175393758,0.104859344425711,0.724752362478018,0.576060012515731,0.316011120628178,0,0.205421914329655,0.25984164595559,0.358053391334963,0.39736270956253,0.120195449519969,0.147689527174577,0,0.304827226619999,0.201652370273681,0,0,0.116876902181569,0.680191150845634,0.221985953374065,0,0,1.54551675225752,0,0.183151624267265,0.214368379079066,1.50471631210609,4.51801474093653,1.84130094602871,1.14579102687879,1.89038500578056,2.05524755931193,2.2661816921691,2.70009000092722,1.80128481289688,2.26571204492102,2.07104124700728,0,0,0.170733605754134,0.243106717068294,0.209613162627982,0.183843508450014,0.44449345560323,0.412070114477788,0.64183841918363,0,0.760437899670719,0.754505365544305,0.280924522409647,0.320125762024346,0.229741875822453,0,0.347652977834566,0.192909220463705,0,0.441596760403192,0.342869252385415,0.354951612318675,0.476872379894642,0.290692833264657,0.470546902076653,0.507687647350059,0.182927972872773,0.263069711437843,0.135804113845862,0,0.237270036248348,0.197008964751127,0.409231043169689,0.619747364743864,0,0.249810577937946,1.16965804222704,1.07435527024149,2.29545998482612,0.882365676478062,0.463735671240843
|short_description=p2@Ahcyl1
|short_description=p2@Ahcyl1
}}
}}

Revision as of 18:39, 14 November 2012

Short description:p2@Ahcyl1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Ahcyl1_5end
Coexpression cluster:MCL_coexpression_mm9:3383
Association with transcript: -242bp_to_ENSMUST00000153623_5end
EntrezGene:Ahcyl1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Ahcyl1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.81
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.84
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I21.08
Ileum epithelium, pool1.CNhs13199.10252-104B91.71
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.62
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.92
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.68
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.53
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.07
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.90
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.88
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H14.92
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B26.73
cerebellum, neonate N30.CNhs11135.1395-42I26.07
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A45.84
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D52.26
cortex, neonate N30.CNhs11107.1392-42F24.09
diencephalon, adult.CNhs10482.20-12F26.44
diencephalon, neonate N30.CNhs11201.1388-42B24.38
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.75
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A22.85
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E31.52
heart, neonate N03.CNhs11221.1349-25I21.81
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G11.54
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D21.07
hippocampus, adult.CNhs10478.13-16E82.94
hippocampus, neonate N00.CNhs11228.627-43G10.62
intestinal mucosa, adult.CNhs10506.860-29I33.63
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.51
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.98
kidney, neonate N10.CNhs11206.758-6D51.52
kidney, neonate N20.CNhs11113.832-19I11.48
kidney, neonate N25.CNhs11122.1353-25F31.73
kidney, neonate N30.CNhs11203.1385-42H12.71
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H21.16
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C25.94
medulla oblongata, neonate N30.CNhs11200.1396-42A36.21
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C96.68
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A91.49
stomach, neonate N25.CNhs11104.1355-25E42.09
stomach, neonate N30.CNhs11134.1386-42I11.68
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.30
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.55
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.89
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C62.30
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system5.45e-1554
neural tube2.82e-1352
neural rod2.82e-1352
future spinal cord2.82e-1352
neural keel2.82e-1352
occipital lobe2.02e-1110
visual cortex2.02e-1110
neocortex2.02e-1110
regional part of brain3.46e-1146
neurectoderm4.90e-1164
neural plate4.90e-1164
presumptive neural plate4.90e-1164
brain8.60e-1147
future brain8.60e-1147
gray matter4.38e-1034
central nervous system1.03e-0973
structure with developmental contribution from neural crest2.38e-0992
nervous system3.27e-0975
brain grey matter4.68e-0929
regional part of telencephalon4.68e-0929
telencephalon4.68e-0929
ecto-epithelium1.35e-0873
anterior neural tube2.04e-0840
regional part of cerebral cortex2.16e-0817
anatomical conduit6.22e-08122
regional part of forebrain1.32e-0739
forebrain1.32e-0739
future forebrain1.32e-0739
cerebral cortex1.77e-0721
cerebral hemisphere1.77e-0721
pallium1.77e-0721
pre-chordal neural plate1.81e-0749
tube2.45e-07114
ectoderm-derived structure2.47e-0795
ectoderm2.47e-0795
presumptive ectoderm2.47e-0795







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:107499123..107499134,-&oldid=2335557"