FFCP PHASE1:Mm9::chrX:66015014..66015048,+: Difference between revisions
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|id=chrX:66015014..66015048,+ | |id=chrX:66015014..66015048,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003133!1.36e-10!24;UBERON:0000991!1.58e-10!18;UBERON:0005564!1.58e-10!18;UBERON:0004176!5.15e-10!17;UBERON:0009196!5.15e-10!17;UBERON:0009117!5.15e-10!17;UBERON:0005156!4.01e-09!26;UBERON:0000990!4.01e-09!26;UBERON:0003135!1.21e-08!15;UBERON:0000473!1.58e-08!14;UBERON:0003914!3.50e-08!47;UBERON:0003101!9.36e-08!16;UBERON:0000079!9.36e-08!16 | |ontology_enrichment_uberon=UBERON:0003133!1.36e-10!24;UBERON:0000991!1.58e-10!18;UBERON:0005564!1.58e-10!18;UBERON:0004176!5.15e-10!17;UBERON:0009196!5.15e-10!17;UBERON:0009117!5.15e-10!17;UBERON:0005156!4.01e-09!26;UBERON:0000990!4.01e-09!26;UBERON:0003135!1.21e-08!15;UBERON:0000473!1.58e-08!14;UBERON:0003914!3.50e-08!47;UBERON:0003101!9.36e-08!16;UBERON:0000079!9.36e-08!16 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003133,2.30e-20,24;UBERON:0004176,3.84e-20,17;UBERON:0009196,3.84e-20,17;UBERON:0009117,3.84e-20,17;UBERON:0000991,6.28e-19,18;UBERON:0005564,6.28e-19,18;UBERON:0005156,1.26e-18,26;UBERON:0000990,1.26e-18,26;UBERON:0000473,7.89e-16,14;UBERON:0003135,1.07e-14,15;UBERON:0003101,1.05e-13,16;UBERON:0000079,1.05e-13,16;UBERON:0005631,1.15e-12,3;UBERON:0000478,1.15e-12,3;UBERON:0000158,1.15e-12,3;UBERON:0002323,4.89e-10,37;UBERON:0004458,4.89e-10,37;UBERON:0003886,1.01e-09,38;UBERON:0002553,2.02e-09,39;UBERON:0001987,5.38e-09,2;UBERON:0003124,5.38e-09,2;UBERON:0004340,5.38e-09,2;UBERON:0003134,6.69e-08,8;UBERON:0000474,5.04e-07,9;UBERON:0002107,6.32e-07,22;UBERON:0007499,6.32e-07,22;UBERON:0006925,6.32e-07,22;UBERON:0009497,6.32e-07,22;UBERON:0000015,6.32e-07,22;UBERON:0002423,6.32e-07,22;UBERON:0006235,6.32e-07,22;UBERON:0008835,6.32e-07,22;UBERON:0003894,6.32e-07,22;UBERON:0004161,6.32e-07,22;UBERON:0008836,6.32e-07,22 | |||
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|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0,0.333109761815663,0.202475267389826,0,0,0.548457734422955,0,5.3577272795174,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0.288851619751275,0.498703936075477,0.408338712524738,0,0,0.523523743973798,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0.289864488701678,5.16254326188832,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0.304465478312141,0,0.60289056221049,0.117588707135705,0,72.9225154816403,0.144599356919912,0,0,0,0,0,0,0,0.255457055208591,0.239630249011841,0,0.635351135365324,0.149790639404823,0,0,0,0,0,0,0.509196819251581,0.124406970610093,0.252722758433675,0.420883711772948,0.260240885925407,0,0,0,0.136072998302656,0,0,0,0,0.567318240503458,0,0,0,0,0.61734640922383,0.59710280045548,0,0.257347907114715,0,0,0.469052119962192,0.540186184383045,0.473489471170421,0.393528463494808,0,0.697601834251224,0.536546802799238,0.583826711835847,0.987359099480883,0.820837320395476,0.648550476366846,0.438599962275997,0.878200461164203,0.268412837520744,0,0,3.96502539580558,0,0,0.232236671860439,0.257734922644187,0,0.22237804384487,0.951128130562796,0.474529061544512,0.329397909448022,0.502670417600539,0.795825888164603,0.19496408711912,0,0.648414149624083,0,0.379335801906163,0.114248512609729,0,0.203651327845314,0,0,0.0632365371242573,0.147610147979602,0.470996183524124,0,2.07516838961004,1.33476084572875,0.786235980452812,0.899448449539415,0.608580364165509,0.241177159752417,0.25462585178142,0.863088412352432,0.648540907100142,2.19649130550465,1.43768206527355,1.11642284300551,0.312037673114561,0,1.4351793081753,0,0,0.37898282354097,0,0,0,0,0.238043640886014,0,0,0,0,0.327726629431476,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.141940085208269,5.34196811001766,4.88660878060728,0,0,0,0,0.377210159511796,0.295301892880773,0,0,0,0.356497378384721,0.316036757935816,0,1.03135543248187,0,0,0.129358683782755,0.214337035031592,0,0,0,0,32.384695712792,93.6297753218085,0,0,0.322928853391811,0.120625849856312,0,0,0.874442509889552,0.18542530201051,0.170870880797853,0,0.185194527369712,0.188368457004691,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0,0.436725127492355,0.404593039154462,0.743881101528023,1.30877970992015,0,0,14.0923234671048,1.34564891439581,2.97825282822776,1.55560950675238,0.904118764344118,0.844780627453891,0.352071715937262,4.1665403150064,23.3836338069335,31.8891039490328,16.4177103566983,0.632022241256357,0,0,0,0,0.596044064343795,0.120195449519969,0.147689527174577,0,0,0.100826185136841,0,0,0,0,0,0.0897138566094757,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.682934423016537,0.972426868273176,0,0.367687016900028,0.222246727801615,0,0.320919209591815,1.01078884705519,0,0,0.280924522409647,0.128050304809739,0.287177344778066,0.952587382566147,0.115884325944855,0.192909220463705,0,0.441596760403192,0,0,0.476872379894642,0.436039249896986,0.188218760830661,0.169229215783353,0.182927972872773,0.526139422875686,0.407412341537585,0,0.474540072496697,0.29551344712669,0,0.309873682371932,0.385813221962283,0,0.233931608445408,0,0,0,0 | ||
|short_description=p1@Fmr1nb | |short_description=p1@Fmr1nb | ||
}} | }} |
Revision as of 16:23, 14 November 2012
Short description: | p1@Fmr1nb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Fmr1nb_5end |
Coexpression cluster: | MCL_coexpression_mm9:144 |
Association with transcript: | 0bp_to_ENSMUST00000069731, NM_001166619, NM_001166620, NM_174993, uc012hjh.1, uc012hji.1, uc012hjj.1_5end |
EntrezGene: | Fmr1nb |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
reproductive organ | 2.30e-20 | 24 |
external genitalia | 3.84e-20 | 17 |
indifferent external genitalia | 3.84e-20 | 17 |
indifferent gonad | 3.84e-20 | 17 |
gonad | 6.28e-19 | 18 |
gonad primordium | 6.28e-19 | 18 |
reproductive structure | 1.26e-18 | 26 |
reproductive system | 1.26e-18 | 26 |
testis | 7.89e-16 | 14 |
male reproductive organ | 1.07e-14 | 15 |
male organism | 1.05e-13 | 16 |
male reproductive system | 1.05e-13 | 16 |
extraembryonic membrane | 1.15e-12 | 3 |
extraembryonic structure | 1.15e-12 | 3 |
membranous layer | 1.15e-12 | 3 |
body cavity | 4.89e-10 | 37 |
body cavity or lining | 4.89e-10 | 37 |
body cavity precursor | 1.01e-09 | 38 |
anatomical cavity | 2.02e-09 | 39 |
placenta | 5.38e-09 | 2 |
chorion | 5.38e-09 | 2 |
allantois | 5.38e-09 | 2 |
female reproductive organ | 6.69e-08 | 8 |
female reproductive system | 5.04e-07 | 9 |
liver | 6.32e-07 | 22 |
epithelial sac | 6.32e-07 | 22 |
digestive gland | 6.32e-07 | 22 |
epithelium of foregut-midgut junction | 6.32e-07 | 22 |
anatomical boundary | 6.32e-07 | 22 |
hepatobiliary system | 6.32e-07 | 22 |
foregut-midgut junction | 6.32e-07 | 22 |
hepatic diverticulum | 6.32e-07 | 22 |
liver primordium | 6.32e-07 | 22 |
septum transversum | 6.32e-07 | 22 |
liver bud | 6.32e-07 | 22 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.