Personal tools

FFCP PHASE1:Mm9::chr8:73328900..73328909,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 8: Line 8:
|id=chr8:73328900..73328909,-
|id=chr8:73328900..73328909,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002610,9.21e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007811!2.57e-10!86;UBERON:0000955!6.45e-10!50;UBERON:0006238!6.45e-10!50;UBERON:0000153!1.62e-09!94;UBERON:0002616!2.06e-09!49;UBERON:0000033!6.62e-08!63;UBERON:0002021!9.15e-08!10;UBERON:0000411!9.15e-08!10;UBERON:0001950!9.15e-08!10;UBERON:0001049!2.75e-07!52;UBERON:0005068!2.75e-07!52;UBERON:0006241!2.75e-07!52;UBERON:0007135!2.75e-07!52;UBERON:0000073!3.74e-07!75;UBERON:0001016!3.74e-07!75;UBERON:0001017!3.95e-07!73;UBERON:0005743!3.95e-07!73;UBERON:0003080!6.53e-07!40
|ontology_enrichment_uberon=UBERON:0007811!2.57e-10!86;UBERON:0000955!6.45e-10!50;UBERON:0006238!6.45e-10!50;UBERON:0000153!1.62e-09!94;UBERON:0002616!2.06e-09!49;UBERON:0000033!6.62e-08!63;UBERON:0002021!9.15e-08!10;UBERON:0000411!9.15e-08!10;UBERON:0001950!9.15e-08!10;UBERON:0001049!2.75e-07!52;UBERON:0005068!2.75e-07!52;UBERON:0006241!2.75e-07!52;UBERON:0007135!2.75e-07!52;UBERON:0000073!3.74e-07!75;UBERON:0001016!3.74e-07!75;UBERON:0001017!3.95e-07!73;UBERON:0005743!3.95e-07!73;UBERON:0003080!6.53e-07!40
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.47e-18,10;UBERON:0000411,1.47e-18,10;UBERON:0001950,1.47e-18,10;UBERON:0002619,1.36e-12,17;UBERON:0000073,2.54e-12,54;UBERON:0000956,5.27e-12,21;UBERON:0001869,5.27e-12,21;UBERON:0000203,5.27e-12,21;UBERON:0000955,7.09e-12,47;UBERON:0006238,7.09e-12,47;UBERON:0003528,2.31e-11,29;UBERON:0002791,2.31e-11,29;UBERON:0001893,2.31e-11,29;UBERON:0002616,9.41e-11,46;UBERON:0001049,2.57e-10,52;UBERON:0005068,2.57e-10,52;UBERON:0006241,2.57e-10,52;UBERON:0007135,2.57e-10,52;UBERON:0001017,5.58e-10,73;UBERON:0001016,1.42e-09,75;UBERON:0002020,3.11e-09,34;UBERON:0002780,7.61e-09,39;UBERON:0001890,7.61e-09,39;UBERON:0006240,7.61e-09,39;UBERON:0003080,1.53e-08,40;UBERON:0002346,1.41e-07,64;UBERON:0003075,1.41e-07,64;UBERON:0007284,1.41e-07,64;UBERON:0004684,9.21e-07,3;UBERON:0002275,9.21e-07,3
|phase1_expression=0.160148847104794,0,0,0.30246421130683,0.500895729946347,0,0,0.645616617207881,0,0,0.34243593645101,0.478632953972018,0,0.0874204024189974,0.333109761815663,0,0.699561878128147,0.946386496074713,1.7824876368746,1.27316895539409,1.10556277196391,0.992909512008853,0.783599367416806,0,0.45881856213434,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,5.85944283031671,0,0.523523743973798,1.17646297606203,4.09827290975067,2.91306211818692,0,0,0.183546752161682,0,0.218025156380447,0.219686182734472,0.777719596297134,0.419959264876088,0,0.671130424230945,0,0,0,0.286533439938757,0,0,0,0,0,0,0,1.97773272513395,1.4209602298922,0.599200221036809,0,0,0.135005938331691,0.210324961351382,0,0.220868540951614,0,0.0958454710182364,0,1.10115880999389,1.14918604276669,2.61131106535614,0,0.457438218012048,0.52091337055676,0.558365998002762,0.56276261003168,1.68078072554491,0,0.854230084794618,0,0.151452386666368,0.377857800533928,0,0.860423876981386,0,0,1.29955283489534,0.448026887097336,0.561777680527007,0.681721290312231,0.519572009205738,0.35333957451034,0.14084341977668,1.28326477414318,0,0,0.216491041011214,0,0,0.22836775943812,1.03575153458869,0.445326417194474,0.173485326766136,0,0.230615497256059,0,0,0.125666591329675,0.741584903203122,0,0,0.323533699894818,0.441683036920787,0.484875253135222,0,1.46390398505774,1.25668024088073,0.255457055208591,0.239630249011841,1.19980546198682,0.127070227073065,0.449371918214468,2.74500361691176,0.125654352112864,6.60532416730651,4.85859368927628,1.0389402227978,0.973447578406546,0.101839363850316,0.870848794270651,1.51633655060205,0.631325567659422,0.130120442962704,0,0.180062129805349,0.150704817835715,0.340182495756639,0.12811372028485,0.0937017245597288,0.258703370739016,0.215567992932842,0.189106080167819,0.175951124163949,0,0,0,0.61734640922383,0,0.702213187313235,0.257347907114715,0.284163499395593,0.207125772535502,0,0,0,0,0,0,0.268273401399619,0,0,0,0.243206428637567,0.292399974850665,0.658650345873152,0.134206418760372,4.41608891984667,0.308713837137853,0.330418782983798,0.528901133327089,0,0,0.128867461322093,0.403367049246685,0.22237804384487,0.380451252225118,0,0,0.502670417600539,0,0,0,0.432276099749388,0.398282546508734,0,0.114248512609729,0,0,0.193952487167626,0,0.126473074248515,0,0.156998727841375,0.123397163921801,0.592905254174298,0,0.393117990226406,0,0.608580364165509,0.241177159752417,0.25462585178142,0,0.486405680325106,0,0,0,0.312037673114561,0.252578877947112,0.538192240565737,0,0.369506380333209,0,0,0.339490171550376,0.234690248288502,0.335012514883631,0,0.195133647857799,0,0,0,0.327726629431476,0.172684981865896,0,1.50791283939272,1.08781136763742,0,0,0.80275294993896,1.87538698547525,0.163934945376675,0,0.315508219416257,0,0.646270193198397,0,0.668396022247182,0.283076530788832,0.809621403349789,0.584511715822624,0,1.60660658210904,0.425820255624806,0,0.325773918707152,0,0,0.242780636154981,0,0.188605079755898,0.885905678642318,0.307435147943927,0,0,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0,0.129358683782755,0.428674070063185,0.354680467284547,0.178368817602071,0.329098041204242,0.608929898229199,0,0,0.220528398054962,0.16488625294148,0.645857706783622,0.120625849856312,0,0,0,1.66882771809459,0.683483523191411,0,0.370389054739423,0.376736914009382,0,0.457556346413045,0.339956859987711,0.279902904647316,0.138199973804424,0,0.158167996790568,0,0.216010681643603,0,0.218362563746178,0,0.0826534557253359,0.26175594198403,0.259229946583586,0,0,0.299033092087958,0.165458490457098,0.194451188344048,0.387479470433193,0,0,0.2604087696879,0.104859344425711,0.241584120826006,0,0.948033361884535,0.202725215290164,0.410843828659309,0.25984164595559,0.895133478337407,0.79472541912506,0.600977247599844,0.738447635872886,0.706765149637033,1.143102099825,0.705783295957884,1.07203668813728,0.962118416403295,1.05189211963412,0.226730383615211,0,0,0,0,0.375364950902364,0.183151624267265,0,0,0.564751842617067,1.38097570952153,4.01026859407578,1.89038500578056,4.11049511862385,6.7985450765073,4.72515750162264,4.95353323546643,7.70342095273148,9.83744592328458,0.103787347584177,0,0.170733605754134,0.243106717068294,0,0,0,0.206035057238894,0,0.505394423527595,0.50695859978048,0.188626341386076,0.187283014939765,0.320125762024346,0.114870937911227,0,0.463537303779422,0.578727661391115,0,0.294397840268795,0.342869252385415,0.354951612318675,0,0,0.0941093804153306,0.25384382367503,0,0,0.271608227691724,0,0,0.0985044823755635,0.409231043169689,0.154936841185966,0.385813221962283,0.249810577937946,0.467863216890817,0.429742108096597,0.191288332068843,0.220591419119515,0.463735671240843
|phase1_expression=0.160148847104794,0,0,0.30246421130683,0.500895729946347,0,0,0.645616617207881,0,0,0.34243593645101,0.478632953972018,0,0.0874204024189974,0.333109761815663,0,0.699561878128147,0.946386496074713,1.7824876368746,1.27316895539409,1.10556277196391,0.992909512008853,0.783599367416806,0,0.45881856213434,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,5.85944283031671,0,0.523523743973798,1.17646297606203,4.09827290975067,2.91306211818692,0,0,0.183546752161682,0,0.218025156380447,0.219686182734472,0.777719596297134,0.419959264876088,0,0.671130424230945,0,0,0,0.286533439938757,0,0,0,0,0,0,0,1.97773272513395,1.4209602298922,0.599200221036809,0,0,0.135005938331691,0.210324961351382,0,0.220868540951614,0,0.0958454710182364,0,1.10115880999389,1.14918604276669,2.61131106535614,0,0.457438218012048,0.52091337055676,0.558365998002762,0.56276261003168,1.68078072554491,0,0.854230084794618,0,0.151452386666368,0.377857800533928,0,0.860423876981386,0,0,1.29955283489534,0.448026887097336,0.561777680527007,0.681721290312231,0.519572009205738,0.35333957451034,0.14084341977668,1.28326477414318,0,0,0.216491041011214,0,0,0.22836775943812,1.03575153458869,0.445326417194474,0.173485326766136,0,0.230615497256059,0,0,0.125666591329675,0.741584903203122,0,0,0.323533699894818,0.441683036920787,0.484875253135222,0,1.46390398505774,1.25668024088073,0.255457055208591,0.239630249011841,1.19980546198682,0.127070227073065,0.449371918214468,2.74500361691176,0.125654352112864,6.60532416730651,4.85859368927628,1.0389402227978,0.973447578406546,0.101839363850316,0.870848794270651,1.51633655060205,0.631325567659422,0.130120442962704,0,0.180062129805349,0.150704817835715,0.340182495756639,0.12811372028485,0.0937017245597288,0.258703370739016,0.215567992932842,0.189106080167819,0.175951124163949,0,0,0,0.61734640922383,0,0.702213187313235,0.257347907114715,0.284163499395593,0.207125772535502,0,0,0,0,0,0,0.268273401399619,0,0,0,0.243206428637567,0.292399974850665,0.658650345873152,0.134206418760372,4.41608891984667,0.308713837137853,0.330418782983798,0.528901133327089,0,0,0.128867461322093,0.403367049246685,0.22237804384487,0.380451252225118,0,0,0.502670417600539,0,0,0,0.432276099749388,0.398282546508734,0,0.114248512609729,0,0,0.193952487167626,0,0.126473074248515,0,0.156998727841375,0.123397163921801,0.592905254174298,0,0.393117990226406,0,0.608580364165509,0.241177159752417,0.25462585178142,0,0.486405680325106,0,0,0,0.312037673114561,0.252578877947112,0.538192240565737,0,0.369506380333209,0,0,0.339490171550376,0.234690248288502,0.335012514883631,0,0.195133647857799,0,0,0,0.327726629431476,0.172684981865896,0,1.50791283939272,1.08781136763742,0,0,0.80275294993896,1.87538698547525,0.163934945376675,0,0.315508219416257,0,0.646270193198397,0,0.668396022247182,0.283076530788832,0.809621403349789,0.584511715822624,0,1.60660658210904,0.425820255624806,0,0.325773918707152,0,0,0.242780636154981,0,0.188605079755898,0.885905678642318,0.307435147943927,0,0,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0,0.129358683782755,0.428674070063185,0.354680467284547,0.178368817602071,0.329098041204242,0.608929898229199,0,0,0.220528398054962,0.16488625294148,0.645857706783622,0.120625849856312,0,0,0,1.66882771809459,0.683483523191411,0,0.370389054739423,0.376736914009382,0,0.457556346413045,0.339956859987711,0.279902904647316,0.138199973804424,0,0.158167996790568,0,0.216010681643603,0,0.218362563746178,0,0.0826534557253359,0.26175594198403,0.259229946583586,0,0,0.299033092087958,0.165458490457098,0.194451188344048,0.387479470433193,0,0,0.2604087696879,0.104859344425711,0.241584120826006,0,0.948033361884535,0.202725215290164,0.410843828659309,0.25984164595559,0.895133478337407,0.79472541912506,0.600977247599844,0.738447635872886,0.706765149637033,1.143102099825,0.705783295957884,1.07203668813728,0.962118416403295,1.05189211963412,0.226730383615211,0,0,0,0,0.375364950902364,0.183151624267265,0,0,0.564751842617067,1.38097570952153,4.01026859407578,1.89038500578056,4.11049511862385,6.7985450765073,4.72515750162264,4.95353323546643,7.70342095273148,9.83744592328458,0.103787347584177,0,0.170733605754134,0.243106717068294,0,0,0,0.206035057238894,0,0.505394423527595,0.50695859978048,0.188626341386076,0.187283014939765,0.320125762024346,0.114870937911227,0,0.463537303779422,0.578727661391115,0,0.294397840268795,0.342869252385415,0.354951612318675,0,0,0.0941093804153306,0.25384382367503,0,0,0.271608227691724,0,0,0.0985044823755635,0.409231043169689,0.154936841185966,0.385813221962283,0.249810577937946,0.467863216890817,0.429742108096597,0.191288332068843,0.220591419119515,0.463735671240843
|short_description=p@chr8:73328900..73328909,-
|short_description=p@chr8:73328900..73328909,-
}}
}}

Revision as of 15:53, 14 November 2012

Short description:p@chr8:73328900..73328909, -
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr8:73328900..73328909, -
Coexpression cluster:MCL_coexpression_mm9:3046
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr8:73328900..73328909-

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.65
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.48
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.95
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.78
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.11
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.99
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G85.86
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H24.10
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.91
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.67
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.15
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.68
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I21.26
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D56.61
cortex, neonate N30.CNhs11107.1392-42F24.86
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B20.97
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.87
epididymis, adult.CNhs10490.58-23B21.52
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E84.42
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A31.88
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.67
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C40.71
thymus, neonate N07.CNhs11211.713-19D31.14
thymus, neonate N10.CNhs11194.748-24E40.71
thymus, neonate N20.CNhs11186.820-7A21.07
thymus, neonate N25.CNhs11125.1362-25G70.96
thymus, neonate N30.CNhs11132.1393-42G21.05
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.89
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.80
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.95
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.70
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A99.84
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.11
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
raphe nuclei neuron9.21e-073

Uber anatomy
Ontology termp-valuen
occipital lobe1.47e-1810
visual cortex1.47e-1810
neocortex1.47e-1810
regional part of cerebral cortex1.36e-1217
regional part of nervous system2.54e-1254
cerebral cortex5.27e-1221
cerebral hemisphere5.27e-1221
pallium5.27e-1221
brain7.09e-1247
future brain7.09e-1247
brain grey matter2.31e-1129
regional part of telencephalon2.31e-1129
telencephalon2.31e-1129
regional part of brain9.41e-1146
neural tube2.57e-1052
neural rod2.57e-1052
future spinal cord2.57e-1052
neural keel2.57e-1052
central nervous system5.58e-1073
nervous system1.42e-0975
gray matter3.11e-0934
regional part of forebrain7.61e-0939
forebrain7.61e-0939
future forebrain7.61e-0939
anterior neural tube1.53e-0840
neurectoderm1.41e-0764
neural plate1.41e-0764
presumptive neural plate1.41e-0764
raphe nuclei9.21e-073
reticular formation9.21e-073







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr8:73328900..73328909,-&oldid=2328316"