FFCP PHASE1:Mm9::chr17:51971960..51971979,-: Difference between revisions
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|id=chr17:51971960..51971979,- | |id=chr17:51971960..51971979,- | ||
|ontology_enrichment_celltype=CL:0000838!5.05e-09!12;CL:0000084!2.11e-08!11;CL:0000827!2.11e-08!11;CL:0000542!2.12e-08!13;CL:0000051!2.12e-08!13;CL:0000791!3.10e-07!9;CL:0000789!3.10e-07!9;CL:0002420!3.10e-07!9;CL:0002419!3.10e-07!9;CL:0000790!3.10e-07!9 | |ontology_enrichment_celltype=CL:0000838!5.05e-09!12;CL:0000084!2.11e-08!11;CL:0000827!2.11e-08!11;CL:0000542!2.12e-08!13;CL:0000051!2.12e-08!13;CL:0000791!3.10e-07!9;CL:0000789!3.10e-07!9;CL:0002420!3.10e-07!9;CL:0002419!3.10e-07!9;CL:0000790!3.10e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.16e-11,12;CL:0000084,1.41e-10,11;CL:0000827,1.41e-10,11;CL:0000542,3.94e-10,13;CL:0000051,3.94e-10,13;CL:0000791,4.83e-09,9;CL:0000789,4.83e-09,9;CL:0002420,4.83e-09,9;CL:0002419,4.83e-09,9;CL:0000790,4.83e-09,9;CL:0000624,3.25e-08,8;CL:0002031,1.27e-07,25;CL:0000988,5.52e-07,32;CL:0002032,5.52e-07,32;CL:0000037,5.52e-07,32;CL:0000837,5.52e-07,32 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.16e-11!29;UBERON:0002370!7.01e-11!23;UBERON:0000974!7.01e-11!23;UBERON:0004807!7.01e-11!23;UBERON:0005058!7.01e-11!23;UBERON:0003351!7.01e-11!23;UBERON:0009113!7.01e-11!23;UBERON:0003295!7.01e-11!23;UBERON:0009722!7.01e-11!23;UBERON:0005562!7.01e-11!23;UBERON:0007690!7.01e-11!23;UBERON:0003408!1.07e-10!24;UBERON:0006562!6.73e-10!24;UBERON:0001557!6.73e-10!24;UBERON:0001042!6.73e-10!24;UBERON:0008814!6.73e-10!24;UBERON:0009145!6.73e-10!24;UBERON:0002390!5.34e-08!45;UBERON:0003061!5.34e-08!45;UBERON:0002193!7.96e-08!48;UBERON:0000072!1.76e-07!27;UBERON:0000065!4.45e-07!41;UBERON:0001004!4.54e-07!42 | |ontology_enrichment_uberon=UBERON:0004177!1.16e-11!29;UBERON:0002370!7.01e-11!23;UBERON:0000974!7.01e-11!23;UBERON:0004807!7.01e-11!23;UBERON:0005058!7.01e-11!23;UBERON:0003351!7.01e-11!23;UBERON:0009113!7.01e-11!23;UBERON:0003295!7.01e-11!23;UBERON:0009722!7.01e-11!23;UBERON:0005562!7.01e-11!23;UBERON:0007690!7.01e-11!23;UBERON:0003408!1.07e-10!24;UBERON:0006562!6.73e-10!24;UBERON:0001557!6.73e-10!24;UBERON:0001042!6.73e-10!24;UBERON:0008814!6.73e-10!24;UBERON:0009145!6.73e-10!24;UBERON:0002390!5.34e-08!45;UBERON:0003061!5.34e-08!45;UBERON:0002193!7.96e-08!48;UBERON:0000072!1.76e-07!27;UBERON:0000065!4.45e-07!41;UBERON:0001004!4.54e-07!42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.07e-15,23;UBERON:0000974,5.07e-15,23;UBERON:0004807,5.07e-15,23;UBERON:0005058,5.07e-15,23;UBERON:0003351,5.07e-15,23;UBERON:0009113,5.07e-15,23;UBERON:0003295,5.07e-15,23;UBERON:0009722,5.07e-15,23;UBERON:0005562,5.07e-15,23;UBERON:0007690,5.07e-15,23;UBERON:0004177,4.36e-14,29;UBERON:0005057,4.36e-14,29;UBERON:0006562,5.07e-14,24;UBERON:0003408,5.07e-14,24;UBERON:0001557,5.07e-14,24;UBERON:0001042,5.07e-14,24;UBERON:0008814,5.07e-14,24;UBERON:0009145,5.07e-14,24;UBERON:0000072,1.70e-11,27;UBERON:0000065,1.11e-10,41;UBERON:0002390,3.10e-10,45;UBERON:0003061,3.10e-10,45;UBERON:0001004,3.53e-10,42;UBERON:0000077,4.95e-10,35;UBERON:0002193,6.19e-10,48;UBERON:0002405,6.19e-10,48 | |||
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| ||
|short_description=p1@Satb1 | |short_description=p1@Satb1 | ||
}} | }} |
Revision as of 15:00, 14 November 2012
Short description: | p1@Satb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Satb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:4 |
Association with transcript: | 0bp_to_NM_009122, uc008czf.2_5end |
EntrezGene: | Satb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 2.16e-11 | 12 |
T cell | 1.41e-10 | 11 |
pro-T cell | 1.41e-10 | 11 |
lymphocyte | 3.94e-10 | 13 |
common lymphoid progenitor | 3.94e-10 | 13 |
mature alpha-beta T cell | 4.83e-09 | 9 |
alpha-beta T cell | 4.83e-09 | 9 |
immature T cell | 4.83e-09 | 9 |
mature T cell | 4.83e-09 | 9 |
immature alpha-beta T cell | 4.83e-09 | 9 |
CD4-positive, alpha-beta T cell | 3.25e-08 | 8 |
hematopoietic lineage restricted progenitor cell | 1.27e-07 | 25 |
hematopoietic cell | 5.52e-07 | 32 |
hematopoietic oligopotent progenitor cell | 5.52e-07 | 32 |
hematopoietic stem cell | 5.52e-07 | 32 |
hematopoietic multipotent progenitor cell | 5.52e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
thymus | 5.07e-15 | 23 |
neck | 5.07e-15 | 23 |
respiratory system epithelium | 5.07e-15 | 23 |
hemolymphoid system gland | 5.07e-15 | 23 |
pharyngeal epithelium | 5.07e-15 | 23 |
thymic region | 5.07e-15 | 23 |
pharyngeal gland | 5.07e-15 | 23 |
entire pharyngeal arch endoderm | 5.07e-15 | 23 |
thymus primordium | 5.07e-15 | 23 |
early pharyngeal endoderm | 5.07e-15 | 23 |
hemopoietic organ | 4.36e-14 | 29 |
immune organ | 4.36e-14 | 29 |
pharynx | 5.07e-14 | 24 |
gland of gut | 5.07e-14 | 24 |
upper respiratory tract | 5.07e-14 | 24 |
chordate pharynx | 5.07e-14 | 24 |
pharyngeal arch system | 5.07e-14 | 24 |
pharyngeal region of foregut | 5.07e-14 | 24 |
segment of respiratory tract | 1.70e-11 | 27 |
respiratory tract | 1.11e-10 | 41 |
hematopoietic system | 3.10e-10 | 45 |
blood island | 3.10e-10 | 45 |
respiratory system | 3.53e-10 | 42 |
mixed endoderm/mesoderm-derived structure | 4.95e-10 | 35 |
hemolymphoid system | 6.19e-10 | 48 |
immune system | 6.19e-10 | 48 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.