FFCP PHASE1:Mm9::chr7:31230527..31230610,-: Difference between revisions
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|id=chr7:31230527..31230610,- | |id=chr7:31230527..31230610,- | ||
|ontology_enrichment_celltype=CL:0000117!2.26e-13!23;CL:0000337!2.26e-13!23;CL:0002319!2.15e-12!43;CL:0000221!2.23e-12!44;CL:0000133!2.23e-12!44;CL:0000540!3.41e-11!33;CL:0000047!3.41e-11!33;CL:0000031!3.41e-11!33;CL:0000404!3.41e-11!33;CL:0000055!4.11e-10!50;CL:0000393!2.50e-09!39;CL:0000211!2.50e-09!39 | |ontology_enrichment_celltype=CL:0000117!2.26e-13!23;CL:0000337!2.26e-13!23;CL:0002319!2.15e-12!43;CL:0000221!2.23e-12!44;CL:0000133!2.23e-12!44;CL:0000540!3.41e-11!33;CL:0000047!3.41e-11!33;CL:0000031!3.41e-11!33;CL:0000404!3.41e-11!33;CL:0000055!4.11e-10!50;CL:0000393!2.50e-09!39;CL:0000211!2.50e-09!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.84e-13,23;CL:0000337,1.84e-13,23;CL:0002319,1.79e-12,43;CL:0000221,1.85e-12,44;CL:0000133,1.85e-12,44;CL:0000540,2.89e-11,33;CL:0000047,2.89e-11,33;CL:0000031,2.89e-11,33;CL:0000404,2.89e-11,33;CL:0000393,2.19e-09,39;CL:0000211,2.19e-09,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.47e-31!73;UBERON:0005743!1.47e-31!73;UBERON:0000073!5.92e-31!75;UBERON:0001016!5.92e-31!75;UBERON:0002346!1.47e-28!71;UBERON:0003075!1.47e-28!71;UBERON:0007284!1.47e-28!71;UBERON:0001049!4.93e-28!52;UBERON:0005068!4.93e-28!52;UBERON:0006241!4.93e-28!52;UBERON:0007135!4.93e-28!52;UBERON:0000955!2.65e-27!50;UBERON:0006238!2.65e-27!50;UBERON:0000033!5.67e-27!63;UBERON:0004121!8.24e-27!102;UBERON:0000924!8.24e-27!102;UBERON:0006601!8.24e-27!102;UBERON:0002616!1.09e-26!49;UBERON:0003056!2.40e-23!49;UBERON:0003080!4.90e-22!40;UBERON:0002780!1.99e-21!39;UBERON:0001890!1.99e-21!39;UBERON:0006240!1.99e-21!39;UBERON:0002020!7.72e-20!34;UBERON:0002791!3.04e-17!29;UBERON:0003528!3.04e-17!29;UBERON:0001893!3.04e-17!29;UBERON:0000956!2.59e-12!21;UBERON:0001869!2.59e-12!21;UBERON:0000203!2.59e-12!21;UBERON:0002619!1.81e-10!17;UBERON:0007811!4.52e-10!86;UBERON:0000153!1.20e-08!94;UBERON:0002021!1.78e-07!10;UBERON:0000411!1.78e-07!10;UBERON:0001950!1.78e-07!10 | |ontology_enrichment_uberon=UBERON:0001017!1.47e-31!73;UBERON:0005743!1.47e-31!73;UBERON:0000073!5.92e-31!75;UBERON:0001016!5.92e-31!75;UBERON:0002346!1.47e-28!71;UBERON:0003075!1.47e-28!71;UBERON:0007284!1.47e-28!71;UBERON:0001049!4.93e-28!52;UBERON:0005068!4.93e-28!52;UBERON:0006241!4.93e-28!52;UBERON:0007135!4.93e-28!52;UBERON:0000955!2.65e-27!50;UBERON:0006238!2.65e-27!50;UBERON:0000033!5.67e-27!63;UBERON:0004121!8.24e-27!102;UBERON:0000924!8.24e-27!102;UBERON:0006601!8.24e-27!102;UBERON:0002616!1.09e-26!49;UBERON:0003056!2.40e-23!49;UBERON:0003080!4.90e-22!40;UBERON:0002780!1.99e-21!39;UBERON:0001890!1.99e-21!39;UBERON:0006240!1.99e-21!39;UBERON:0002020!7.72e-20!34;UBERON:0002791!3.04e-17!29;UBERON:0003528!3.04e-17!29;UBERON:0001893!3.04e-17!29;UBERON:0000956!2.59e-12!21;UBERON:0001869!2.59e-12!21;UBERON:0000203!2.59e-12!21;UBERON:0002619!1.81e-10!17;UBERON:0007811!4.52e-10!86;UBERON:0000153!1.20e-08!94;UBERON:0002021!1.78e-07!10;UBERON:0000411!1.78e-07!10;UBERON:0001950!1.78e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.74e-32,73;UBERON:0001016,3.56e-31,75;UBERON:0000073,8.70e-30,54;UBERON:0002346,1.54e-29,64;UBERON:0003075,1.54e-29,64;UBERON:0007284,1.54e-29,64;UBERON:0001049,3.12e-28,52;UBERON:0005068,3.12e-28,52;UBERON:0006241,3.12e-28,52;UBERON:0007135,3.12e-28,52;UBERON:0004121,1.17e-26,95;UBERON:0000924,1.17e-26,95;UBERON:0006601,1.17e-26,95;UBERON:0000955,3.37e-25,47;UBERON:0006238,3.37e-25,47;UBERON:0002616,1.36e-24,46;UBERON:0010371,6.59e-24,73;UBERON:0003056,1.65e-23,49;UBERON:0003080,3.44e-22,40;UBERON:0002780,1.41e-21,39;UBERON:0001890,1.41e-21,39;UBERON:0006240,1.41e-21,39;UBERON:0010314,3.83e-20,92;UBERON:0002020,5.63e-20,34;UBERON:0003528,2.32e-17,29;UBERON:0002791,2.32e-17,29;UBERON:0001893,2.32e-17,29;UBERON:0000956,2.15e-12,21;UBERON:0001869,2.15e-12,21;UBERON:0000203,2.15e-12,21;UBERON:0002619,1.56e-10,17;UBERON:0002021,1.60e-07,10;UBERON:0000411,1.60e-07,10;UBERON:0001950,1.60e-07,10 | |||
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| ||
|short_description=p1@Aplp1 | |short_description=p1@Aplp1 | ||
}} | }} |
Revision as of 12:38, 14 November 2012
Short description: | p1@Aplp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Aplp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000006828, ENSMUST00000098581, NM_007467, uc009gek.1, uc012fhn.1_5end |
EntrezGene: | Aplp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.84e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.84e-13 | 23 |
neural cell | 1.79e-12 | 43 |
ectodermal cell | 1.85e-12 | 44 |
neurectodermal cell | 1.85e-12 | 44 |
neuron | 2.89e-11 | 33 |
neuronal stem cell | 2.89e-11 | 33 |
neuroblast | 2.89e-11 | 33 |
electrically signaling cell | 2.89e-11 | 33 |
electrically responsive cell | 2.19e-09 | 39 |
electrically active cell | 2.19e-09 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 8.74e-32 | 73 |
nervous system | 3.56e-31 | 75 |
regional part of nervous system | 8.70e-30 | 54 |
neurectoderm | 1.54e-29 | 64 |
neural plate | 1.54e-29 | 64 |
presumptive neural plate | 1.54e-29 | 64 |
neural tube | 3.12e-28 | 52 |
neural rod | 3.12e-28 | 52 |
future spinal cord | 3.12e-28 | 52 |
neural keel | 3.12e-28 | 52 |
ectoderm-derived structure | 1.17e-26 | 95 |
ectoderm | 1.17e-26 | 95 |
presumptive ectoderm | 1.17e-26 | 95 |
brain | 3.37e-25 | 47 |
future brain | 3.37e-25 | 47 |
regional part of brain | 1.36e-24 | 46 |
ecto-epithelium | 6.59e-24 | 73 |
pre-chordal neural plate | 1.65e-23 | 49 |
anterior neural tube | 3.44e-22 | 40 |
regional part of forebrain | 1.41e-21 | 39 |
forebrain | 1.41e-21 | 39 |
future forebrain | 1.41e-21 | 39 |
structure with developmental contribution from neural crest | 3.83e-20 | 92 |
gray matter | 5.63e-20 | 34 |
brain grey matter | 2.32e-17 | 29 |
regional part of telencephalon | 2.32e-17 | 29 |
telencephalon | 2.32e-17 | 29 |
cerebral cortex | 2.15e-12 | 21 |
cerebral hemisphere | 2.15e-12 | 21 |
pallium | 2.15e-12 | 21 |
regional part of cerebral cortex | 1.56e-10 | 17 |
occipital lobe | 1.60e-07 | 10 |
visual cortex | 1.60e-07 | 10 |
neocortex | 1.60e-07 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.