Personal tools

FFCP PHASE1:Mm9::chr4:63157069..63157099,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 7: Line 7:
|id=chr4:63157069..63157099,-
|id=chr4:63157069..63157099,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000153!4.77e-14!94;UBERON:0007811!3.48e-13!86;UBERON:0001017!1.07e-08!73;UBERON:0005743!1.07e-08!73;UBERON:0000033!1.10e-08!63;UBERON:0004121!3.96e-08!102;UBERON:0000924!3.96e-08!102;UBERON:0006601!3.96e-08!102;UBERON:0002346!4.64e-08!71;UBERON:0003075!4.64e-08!71;UBERON:0007284!4.64e-08!71;UBERON:0000073!8.84e-08!75;UBERON:0001016!8.84e-08!75;UBERON:0000955!1.66e-07!50;UBERON:0006238!1.66e-07!50;UBERON:0003056!3.48e-07!49;UBERON:0002616!3.94e-07!49
|ontology_enrichment_uberon=UBERON:0000153!4.77e-14!94;UBERON:0007811!3.48e-13!86;UBERON:0001017!1.07e-08!73;UBERON:0005743!1.07e-08!73;UBERON:0000033!1.10e-08!63;UBERON:0004121!3.96e-08!102;UBERON:0000924!3.96e-08!102;UBERON:0006601!3.96e-08!102;UBERON:0002346!4.64e-08!71;UBERON:0003075!4.64e-08!71;UBERON:0007284!4.64e-08!71;UBERON:0000073!8.84e-08!75;UBERON:0001016!8.84e-08!75;UBERON:0000955!1.66e-07!50;UBERON:0006238!1.66e-07!50;UBERON:0003056!3.48e-07!49;UBERON:0002616!3.94e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.04e-08,73;UBERON:0002346,2.33e-08,64;UBERON:0003075,2.33e-08,64;UBERON:0007284,2.33e-08,64;UBERON:0004121,3.37e-08,95;UBERON:0000924,3.37e-08,95;UBERON:0006601,3.37e-08,95;UBERON:0001016,8.58e-08,75;UBERON:0010371,1.16e-07,73;UBERON:0003056,3.36e-07,49;UBERON:0000153,8.52e-07,43
|phase1_expression=4.16387002472464,2.79180326111489,3.18499467572675,0.60492842261366,1.50268718983904,8.56184286750638,4.20502753071946,5.81054955487093,2.956563165185,3.04283884218592,3.08192342805909,6.1424562426409,1.88320802924326,3.93391810885488,1.66554880907831,1.01237633694913,0,6.30924330716475,7.95263714913285,11.4585205985468,7.82398269389842,5.56029326724958,3.39559725880616,3.99981056983517,4.81759490241057,0.57423196411502,2.15380998079537,4.52489588640367,1.71021077510736,4.78857246543868,5.32153225572731,0,0,0,7.51014211353314,6.81562045969819,6.53341940039581,0,0,0,0,0.683045484958446,0,3.52511090331616,4.56196190487815,4.9557623083654,3.12956537739216,2.8343270329458,2.41654801007919,2.72201858703997,1.39986421625363,2.87505128729943,5.36904339384756,1.45072428402269,2.68875039313971,1.02903774414379,1.43266719969378,0,4.24864567805155,3.70293685490423,1.90149421051854,3.38844532069132,3.55717918444456,0.449949858640699,1.97773272513395,1.4209602298922,6.5912024314049,6.53171119046643,3.62913643079672,2.8351247049655,2.94454945891935,3.99911378165325,4.63823935998388,5.02212276781312,4.88811902193005,0,14.3150645299205,11.2364857514965,8.75557239560588,5.40733779693795,4.7573574673253,6.25096044668112,9.49222196604695,6.19038871034848,8.25110537994775,4.71405736757868,4.27115042397309,2.79599168737951,1.4387976733305,1.88928900266964,1.44932244350839,0,2.03991400112325,1.07940638327563,1.29955283489534,0,2.94933282276679,2.38602451609281,1.55871602761721,1.41335829804136,6.4787973097273,11.5493829672886,10.1922095882658,7.11066703153331,1.5154372870785,1.26679932737549,1.51657333504435,4.33898742932428,3.88406825470758,13.3597925158342,4.3371331691534,3.04465478312141,3.45923245884088,3.76806601381556,7.17291113527799,5.90632979249475,0.988779870937496,4.04878199375753,4.42305275974937,2.42650274921114,2.65009822152472,4.84875253135222,1.86391761218122,6.14839673724249,9.42510180660548,8.17462576667492,2.87556298814209,1.19980546198682,1.65191295194984,14.9790639404823,11.4375150704657,3.14135880282161,8.69121600961382,9.71718737855256,13.714010940931,8.27430441645564,6.11036183101898,3.85661608891288,7.32895999457657,6.73413938836717,7.026503919986,5.0578462975364,9.00310649026746,5.42537344208574,9.79725587779121,8.83984669965463,7.77724313845749,10.6068382002996,9.26942369611222,11.535470890237,7.9178005873777,7.45265490253754,6.11703948296315,5.92028683087683,3.2925141825271,6.17006227137329,2.1066395619397,0,0.284163499395593,4.14251545071004,3.75241695969754,2.70093092191522,5.91861838963026,3.93528463494808,1.54267112887378,3.25547522650571,3.48755421819505,2.80236821681207,6.58239399653922,4.76085645829376,10.0525323836861,10.3801991071986,12.7339066868809,10.3338942445486,5.04695876553905,4.21908910755066,2.64335026387038,6.08236303326152,5.75878276445132,6.73486348395272,7.34544529535932,7.46229041106367,8.45036566610507,4.75564065281398,5.21981967698963,3.12928013975621,7.03738584640755,6.36660710531683,5.45899443933536,9.88701349519644,5.40345124686736,5.37681437786791,8.15571974098251,5.9409226557059,14.6520056375005,8.96065842519383,7.95205197387266,7.5746685481544,7.96780367765642,7.23289725100051,5.96595165797224,5.30607804863742,2.07516838961004,1.33476084572875,2.75182593158484,1.12431056192427,1.42002084971952,1.4470629585145,1.78238096246994,4.02774592431135,3.08056930872567,1.64736847912849,2.87536413054709,1.86070473834252,1.24815069245824,1.51547326768267,0.358794827043824,0.482443521363367,2.58654466233247,3.97931964718018,4.4000543639347,3.90413697282933,4.69380496577004,4.18765643604539,3.80869825417622,4.48807390072937,3.4679731703362,2.21464689648775,3.82691444777969,1.80249646187312,4.14443956478149,2.4590339958857,1.50791283939272,0,4.91764273019036,2.75936746304733,19.5871719785106,11.6039569726281,4.91804836130026,2.01976741763498,12.9358369960665,8.98009111882268,14.4333676480975,10.2756583119597,8.46634961513098,9.6246020468203,13.7635638569464,14.3205370376543,15.0209355619679,11.2462460747632,9.36804562374573,5.69809931735217,6.51547837414304,11.2179683621324,22.5666735177937,3.15614827001476,3.93020624054176,6.03536255218874,8.26845300066164,9.53048958626175,4.13485269069154,8.72480950746013,9.62542921638748,12.3254335594968,9.48767477174989,24.7525303795648,26.8947288545492,6.12207719706455,6.98536892426874,4.50107773566344,11.7044554203901,7.84822797449111,9.87294123612726,11.2652031172402,1.17335854031855,1.0591603543191,1.32317038832977,5.93590510589328,4.35953952078945,3.73940134554566,5.13301079213487,5.0883678920969,8.16146342563582,10.7546675166096,4.10090113914846,1.857481811669,2.22233432843654,0.753473828018764,1.77702496037333,1.37266903923914,4.9293744698218,4.75834937900437,5.94259887359022,1.90934123603023,7.75023184273782,8.13277868507395,5.40026704109006,3.13632444021703,3.49380101993884,4.18079473792944,5.62043498932284,1.57053565190418,8.81381818384192,4.34937519160848,17.4744810992099,8.37292657846281,5.79104716599842,12.055973677331,6.97463046779748,8.44780627453891,8.9191501370773,9.24451132392046,12.2685432978082,5.79801889982414,8.92893019399383,18.6446561170625,5.27085559754427,6.05994647272481,5.84643703400078,11.6367352183863,10.3314304486258,10.3368086587173,12.7012993370136,11.2072759442444,12.878950324695,15.1239277705261,18.516997340553,18.4726735949433,16.7133970119644,3.17422537061296,2.21985953374065,3.85769583420746,2.01461539636894,1.54551675225752,2.43987218086537,7.8755198434924,4.07299920250225,3.51100472824754,10.7302850097243,8.74617949363636,9.16632821503035,12.0297227640581,10.9613203163303,11.3309084608455,10.1253375034771,12.158672487054,9.9691329976525,14.497288729051,3.94391920819871,11.5717213286299,7.0000778359195,9.72426868273176,2.93458427679175,3.8607136774503,3.77819437262746,4.53277125925567,5.77654577265267,6.57012750585873,5.32306529769503,4.71565853465191,4.21386783614471,5.12201219238954,4.99688579913835,5.71552429539688,4.63537303779422,3.27945674788299,3.29668720642645,2.94397840268795,2.40008476669791,4.08194354166476,5.00715998889374,4.0696996657052,3.95259397744389,4.39995961036718,3.29270351170991,4.73525480588117,4.07412341537585,3.36685362994643,4.86403574309114,4.43270170690036,3.27384834535751,2.94379998253335,4.24394544158511,3.99696924700713,4.91256377735358,4.72716318906256,4.20834330551455,2.20591419119516,3.2461496986859
|phase1_expression=4.16387002472464,2.79180326111489,3.18499467572675,0.60492842261366,1.50268718983904,8.56184286750638,4.20502753071946,5.81054955487093,2.956563165185,3.04283884218592,3.08192342805909,6.1424562426409,1.88320802924326,3.93391810885488,1.66554880907831,1.01237633694913,0,6.30924330716475,7.95263714913285,11.4585205985468,7.82398269389842,5.56029326724958,3.39559725880616,3.99981056983517,4.81759490241057,0.57423196411502,2.15380998079537,4.52489588640367,1.71021077510736,4.78857246543868,5.32153225572731,0,0,0,7.51014211353314,6.81562045969819,6.53341940039581,0,0,0,0,0.683045484958446,0,3.52511090331616,4.56196190487815,4.9557623083654,3.12956537739216,2.8343270329458,2.41654801007919,2.72201858703997,1.39986421625363,2.87505128729943,5.36904339384756,1.45072428402269,2.68875039313971,1.02903774414379,1.43266719969378,0,4.24864567805155,3.70293685490423,1.90149421051854,3.38844532069132,3.55717918444456,0.449949858640699,1.97773272513395,1.4209602298922,6.5912024314049,6.53171119046643,3.62913643079672,2.8351247049655,2.94454945891935,3.99911378165325,4.63823935998388,5.02212276781312,4.88811902193005,0,14.3150645299205,11.2364857514965,8.75557239560588,5.40733779693795,4.7573574673253,6.25096044668112,9.49222196604695,6.19038871034848,8.25110537994775,4.71405736757868,4.27115042397309,2.79599168737951,1.4387976733305,1.88928900266964,1.44932244350839,0,2.03991400112325,1.07940638327563,1.29955283489534,0,2.94933282276679,2.38602451609281,1.55871602761721,1.41335829804136,6.4787973097273,11.5493829672886,10.1922095882658,7.11066703153331,1.5154372870785,1.26679932737549,1.51657333504435,4.33898742932428,3.88406825470758,13.3597925158342,4.3371331691534,3.04465478312141,3.45923245884088,3.76806601381556,7.17291113527799,5.90632979249475,0.988779870937496,4.04878199375753,4.42305275974937,2.42650274921114,2.65009822152472,4.84875253135222,1.86391761218122,6.14839673724249,9.42510180660548,8.17462576667492,2.87556298814209,1.19980546198682,1.65191295194984,14.9790639404823,11.4375150704657,3.14135880282161,8.69121600961382,9.71718737855256,13.714010940931,8.27430441645564,6.11036183101898,3.85661608891288,7.32895999457657,6.73413938836717,7.026503919986,5.0578462975364,9.00310649026746,5.42537344208574,9.79725587779121,8.83984669965463,7.77724313845749,10.6068382002996,9.26942369611222,11.535470890237,7.9178005873777,7.45265490253754,6.11703948296315,5.92028683087683,3.2925141825271,6.17006227137329,2.1066395619397,0,0.284163499395593,4.14251545071004,3.75241695969754,2.70093092191522,5.91861838963026,3.93528463494808,1.54267112887378,3.25547522650571,3.48755421819505,2.80236821681207,6.58239399653922,4.76085645829376,10.0525323836861,10.3801991071986,12.7339066868809,10.3338942445486,5.04695876553905,4.21908910755066,2.64335026387038,6.08236303326152,5.75878276445132,6.73486348395272,7.34544529535932,7.46229041106367,8.45036566610507,4.75564065281398,5.21981967698963,3.12928013975621,7.03738584640755,6.36660710531683,5.45899443933536,9.88701349519644,5.40345124686736,5.37681437786791,8.15571974098251,5.9409226557059,14.6520056375005,8.96065842519383,7.95205197387266,7.5746685481544,7.96780367765642,7.23289725100051,5.96595165797224,5.30607804863742,2.07516838961004,1.33476084572875,2.75182593158484,1.12431056192427,1.42002084971952,1.4470629585145,1.78238096246994,4.02774592431135,3.08056930872567,1.64736847912849,2.87536413054709,1.86070473834252,1.24815069245824,1.51547326768267,0.358794827043824,0.482443521363367,2.58654466233247,3.97931964718018,4.4000543639347,3.90413697282933,4.69380496577004,4.18765643604539,3.80869825417622,4.48807390072937,3.4679731703362,2.21464689648775,3.82691444777969,1.80249646187312,4.14443956478149,2.4590339958857,1.50791283939272,0,4.91764273019036,2.75936746304733,19.5871719785106,11.6039569726281,4.91804836130026,2.01976741763498,12.9358369960665,8.98009111882268,14.4333676480975,10.2756583119597,8.46634961513098,9.6246020468203,13.7635638569464,14.3205370376543,15.0209355619679,11.2462460747632,9.36804562374573,5.69809931735217,6.51547837414304,11.2179683621324,22.5666735177937,3.15614827001476,3.93020624054176,6.03536255218874,8.26845300066164,9.53048958626175,4.13485269069154,8.72480950746013,9.62542921638748,12.3254335594968,9.48767477174989,24.7525303795648,26.8947288545492,6.12207719706455,6.98536892426874,4.50107773566344,11.7044554203901,7.84822797449111,9.87294123612726,11.2652031172402,1.17335854031855,1.0591603543191,1.32317038832977,5.93590510589328,4.35953952078945,3.73940134554566,5.13301079213487,5.0883678920969,8.16146342563582,10.7546675166096,4.10090113914846,1.857481811669,2.22233432843654,0.753473828018764,1.77702496037333,1.37266903923914,4.9293744698218,4.75834937900437,5.94259887359022,1.90934123603023,7.75023184273782,8.13277868507395,5.40026704109006,3.13632444021703,3.49380101993884,4.18079473792944,5.62043498932284,1.57053565190418,8.81381818384192,4.34937519160848,17.4744810992099,8.37292657846281,5.79104716599842,12.055973677331,6.97463046779748,8.44780627453891,8.9191501370773,9.24451132392046,12.2685432978082,5.79801889982414,8.92893019399383,18.6446561170625,5.27085559754427,6.05994647272481,5.84643703400078,11.6367352183863,10.3314304486258,10.3368086587173,12.7012993370136,11.2072759442444,12.878950324695,15.1239277705261,18.516997340553,18.4726735949433,16.7133970119644,3.17422537061296,2.21985953374065,3.85769583420746,2.01461539636894,1.54551675225752,2.43987218086537,7.8755198434924,4.07299920250225,3.51100472824754,10.7302850097243,8.74617949363636,9.16632821503035,12.0297227640581,10.9613203163303,11.3309084608455,10.1253375034771,12.158672487054,9.9691329976525,14.497288729051,3.94391920819871,11.5717213286299,7.0000778359195,9.72426868273176,2.93458427679175,3.8607136774503,3.77819437262746,4.53277125925567,5.77654577265267,6.57012750585873,5.32306529769503,4.71565853465191,4.21386783614471,5.12201219238954,4.99688579913835,5.71552429539688,4.63537303779422,3.27945674788299,3.29668720642645,2.94397840268795,2.40008476669791,4.08194354166476,5.00715998889374,4.0696996657052,3.95259397744389,4.39995961036718,3.29270351170991,4.73525480588117,4.07412341537585,3.36685362994643,4.86403574309114,4.43270170690036,3.27384834535751,2.94379998253335,4.24394544158511,3.99696924700713,4.91256377735358,4.72716318906256,4.20834330551455,2.20591419119516,3.2461496986859
|short_description=p2@Whrn
|short_description=p2@Whrn
}}
}}

Revision as of 12:31, 14 November 2012

Short description:p2@Whrn
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Whrn_5end
Coexpression cluster:NA
Association with transcript: -44bp_to_ENSMUST00000063672_5end
EntrezGene:Whrn
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Whrn

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.79
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.18
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I78.56
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I84.21
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E95.81
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.96
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.04
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.08
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F16.14
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.88
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.93
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A26.31
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A47.95
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A611.46
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.82
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H25.56
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.40
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D14.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D24.82
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I12.15
GP2+ M cell, pool3.CNhs13240.11847-124I24.52
Ileum epithelium, pool1.CNhs13199.10252-104B91.71
Ileum epithelium, pool2.CNhs13232.10253-104C14.79
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C85.32
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F57.51
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F66.82
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F76.53
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.53
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D94.56
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.96
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.83
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.42
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.72
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A25.37
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.69
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C34.25
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.39
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C86.59
Mouse Microglia, donor2.CNhs12634.11736-123E86.53
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.63
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.84
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.64
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.02
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.89
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D314.32
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F311.24
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D78.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.41
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.76
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.25
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E49.49
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.19
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I68.25
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.71
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.80
Mouse Schwann, donor1.CNhs12507.11728-123D91.44
Mouse Schwann, donor2.CNhs12573.11746-123F91.89
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.95
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.48
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H111.55
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.27
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.34
accessory axillary lymph node, adult.CNhs10475.1063-29H93.88
adrenal gland, adult.CNhs10508.49-24D713.36
adrenal gland, embryo E14.CNhs11038.406-44C54.34
adrenal gland, embryo E16.CNhs11004.1254-43D63.04
adrenal gland, embryo E17.CNhs11043.1263-45I13.46
adrenal gland, embryo E18.CNhs11026.1262-18F53.77
adrenal gland, neonate N00.CNhs11191.1311-23C17.17
adrenal gland, neonate N25.CNhs11223.1377-27I35.91
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H14.05
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F52.43
bone (os femoris), neonate N16.CNhs11225.1525-43A62.65
bone (os femoris), neonate N20.CNhs11195.1350-25C34.85
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B26.15
cerebellum, neonate N30.CNhs11135.1395-42I29.43
colon, adult.CNhs10468.36-18H78.17
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.88
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.65
corpora quadrigemina, adult.CNhs10501.16-22A414.98
corpus striatum, adult.CNhs10487.19-21D811.44
corpus striatum, neonate N00.CNhs11226.630-43F13.14
cortex, adult.CNhs10473.12-14D58.69
cortex, neonate N30.CNhs11107.1392-42F29.72
diencephalon, adult.CNhs10482.20-12F213.71
diencephalon, neonate N30.CNhs11201.1388-42B28.27
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.11
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.86
epididymis, adult.CNhs10490.58-23B27.33
eyeball, adult.CNhs10484.31-12G46.73
eyeball, embryo E12.CNhs11016.345-16C67.03
eyeball, embryo E14.CNhs10521.399-16E25.06
eyeball, embryo E15.CNhs10593.426-16C99.00
eyeball, embryo E17.CNhs11023.1261-18D45.43
eyeball, neonate N00.CNhs11207.633-15C69.80
eyeball, neonate N01.CNhs11140.1532-43E78.84
eyeball, neonate N02.CNhs11205.1551-44G87.78
eyeball, neonate N16.CNhs11188.777-19A210.61
forelimb, embryo E11.CNhs10596.335-25E29.27
forelimb, embryo E12.CNhs10600.359-14H211.54
forelimb, embryo E13.CNhs10589.384-1E27.92
forelimb, embryo E14.CNhs10577.413-26A87.45
forelimb, embryo E15.CNhs11007.437-20E76.12
forelimb, embryo E17.CNhs10598.1517-43C45.92
forelimb, embryo E18.CNhs11008.1520-43B53.29
gonad, embryo E13.CNhs11044.1564-45I66.17
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E94.14
heart, embryo E12.CNhs11015.353-12F53.75
heart, embryo E13.CNhs11013.376-3I92.70
heart, embryo E14.CNhs10597.403-26D45.92
heart, embryo E15.CNhs11017.431-16C83.94
heart, embryo E16.CNhs11021.457-17C61.54
heart, embryo E17.CNhs11025.479-18E53.26
heart, embryo E18.CNhs11030.1283-20G33.49
heart, neonate N00.CNhs11213.639-21E32.80
heart, neonate N03.CNhs11221.1349-25I26.58
heart, neonate N10.CNhs11118.749-24G14.76
heart, neonate N16.CNhs11209.782-15G110.05
heart, neonate N20.CNhs11127.821-26I610.38
heart, neonate N25.CNhs11196.1351-25D312.73
heart, neonate N30.CNhs11202.1390-42D210.33
hippocampus, adult.CNhs10478.13-16E85.05
hippocampus, neonate N00.CNhs11228.627-43G14.22
intestinal mucosa, adult.CNhs10506.860-29I32.64
intestine, adult.CNhs10496.178-9A36.08
intestine, embryo E12.CNhs11019.1251-16I55.76
intestine, embryo E13.CNhs11010.381-16D56.73
intestine, embryo E15.CNhs10602.976-16D87.35
intestine, embryo E16.CNhs10585.463-22H47.46
intestine, embryo E17.CNhs10582.482-18D38.45
intestine, embryo E18.CNhs10526.1289-20F74.76
intestine, neonate N00.CNhs11126.644-26D15.22
intestine, neonate N01.CNhs11192.1322-23E93.13
intestine, neonate N06.CNhs11102.688-20B87.04
intestine, neonate N07.CNhs11095.720-20F26.37
intestine, neonate N10.CNhs11098.755-23A55.46
intestine, neonate N20.CNhs11187.827-18D19.89
intestine, neonate N25.CNhs11121.1352-25E35.40
intestine, neonate N30.CNhs11131.1384-42G15.38
kidney, embryo E14.CNhs10606.411-4I98.16
kidney, embryo E15.CNhs10997.434-16F85.94
kidney, embryo E16.CNhs10584.464-22A514.65
kidney, embryo E17.CNhs11028.483-18I28.96
kidney, embryo E18.CNhs11001.1288-20C77.95
kidney, neonate N00.CNhs11214.646-21G77.57
kidney, neonate N10.CNhs11206.758-6D57.97
kidney, neonate N20.CNhs11113.832-19I17.23
kidney, neonate N25.CNhs11122.1353-25F35.97
kidney, neonate N30.CNhs11203.1385-42H15.31
liver, adult pregnant day01.CNhs10466.508-5B22.08
liver, embryo E12.CNhs10601.355-15F81.33
liver, embryo E13.CNhs10524.378-3H62.75
liver, embryo E14.CNhs10594.409-16E11.12
liver, embryo E15.CNhs10520.433-16D71.42
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A31.78
liver, embryo E18.CNhs10579.499-43G44.03
liver, neonate N00.CNhs11117.641-24F43.08
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A31.52
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B12.59
lung, embryo E12.CNhs10522.354-16G23.98
lung, embryo E14.CNhs10604.404-26F84.40
lung, embryo E15.CNhs11020.432-17C53.90
lung, embryo E16.CNhs10998.458-17B64.69
lung, embryo E17.CNhs10605.480-44A64.19
lung, embryo E18.CNhs10583.1287-20I63.81
lung, neonate N00.CNhs11224.640-42C64.49
lung, neonate N06.CNhs11212.683-20E53.47
lung, neonate N07.CNhs11111.715-19A32.21
lung, neonate N10.CNhs11219.750-23E63.83
lung, neonate N20.CNhs11109.822-18A41.80
lung, neonate N25.CNhs11119.1359-25C74.14
lung, neonate N30.CNhs11133.1394-42H22.46
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B64.92
mammary gland, adult pregnant day19.CNhs10476.588-5H22.76
medulla oblongata, adult.CNhs10477.17-12C219.59
medulla oblongata, neonate N30.CNhs11200.1396-42A311.60
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C74.92
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.02
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E112.94
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E28.98
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E314.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D710.28
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D88.47
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D99.62
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D413.76
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D514.32
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D615.02
olfactory brain, adult.CNhs10489.18-22I911.25
ovary, adult.CNhs10507.91-2I79.37
ovary, embryo E18.CNhs11040.505-44H75.70
ovary, neonate N00.CNhs11217.1299-22I46.52
oviduct, adult pregnant day01.CNhs10500.988-6G611.22
pancreas, adult.CNhs10486.34-16E422.57
pancreas, embryo E14.CNhs11012.405-44F43.16
pancreas, embryo E15.CNhs11042.1556-45F23.93
pancreas, embryo E16.CNhs11003.460-26E56.04
pancreas, embryo E17.CNhs10599.1558-45G38.27
pancreas, embryo E18.CNhs10580.1535-43I79.53
pancreas, neonate N00.CNhs11105.645-26G94.13
pancreas, neonate N01.CNhs11138.1531-43D78.72
pancreas, neonate N02.CNhs11139.1539-43D89.63
pancreas, neonate N16.CNhs11136.787-43B612.33
pancreas, neonate N25.CNhs11094.1555-45E29.49
pancreas, neonate N30.CNhs11182.1548-44H524.75
pituitary gland, adult.CNhs10493.21-1G826.89
pituitary gland, embryo E12.CNhs11018.346-16E66.12
pituitary gland, embryo E13.CNhs11009.370-44C76.99
pituitary gland, embryo E14.CNhs11037.398-44A54.50
pituitary gland, embryo E15.CNhs10592.427-16B911.70
pituitary gland, embryo E16.CNhs11036.449-43F67.85
pituitary gland, embryo E17.CNhs11039.1265-44F59.87
pituitary gland, neonate N00.CNhs11190.1308-22E911.27
placenta, adult pregnant day10.CNhs10472.539-13I71.17
placenta, adult pregnant day17.CNhs10464.577-18G31.06
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C35.94
skin, neonate N00.CNhs11124.650-25G44.36
skin, neonate N03.CNhs11215.662-22H33.74
skin, neonate N06.CNhs11097.693-20I55.13
skin, neonate N10.CNhs11108.762-6C45.09
small intestine, neonate N16.CNhs11114.790-21I18.16
spinal cord, adult.CNhs10505.24-13C910.75
spleen, adult.CNhs10465.25-2G24.10
spleen, embryo E16.CNhs11035.461-43C11.86
spleen, embryo E18.CNhs11011.1271-21F22.22
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H11.78
spleen, neonate N25.CNhs11099.1354-25G31.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.93
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.76
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D35.94
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E37.75
stomach, embryo E15.CNhs10603.1252-16G88.13
stomach, embryo E16.CNhs11022.459-17D45.40
stomach, embryo E17.CNhs11006.1035-18D53.14
stomach, embryo E18.CNhs10999.1286-20C63.49
stomach, neonate N03.CNhs11193.1340-24B84.18
stomach, neonate N07.CNhs11210.718-18A95.62
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I18.81
submandibular gland, adult.CNhs10469.59-29C14.35
testis, adult.CNhs10504.57-7G517.47
testis, embryo E13.CNhs11031.389-23F58.37
testis, embryo E15.CNhs11034.443-27C55.79
testis, embryo E16.CNhs11033.470-26G512.06
testis, embryo E17.CNhs11029.486-18I56.97
testis, embryo E18.CNhs11027.503-18G58.45
testis, neonate N00.CNhs11189.1300-22B78.92
testis, neonate N07.CNhs11222.726-26I49.24
testis, neonate N10.CNhs11204.763-44D912.27
testis, neonate N20.CNhs11110.839-18H35.80
testis, neonate N30.CNhs11130.1391-42E28.93
thymus, adult.CNhs10471.38-12B518.64
thymus, embryo E14.CNhs11041.402-44I45.27
thymus, embryo E15.CNhs11005.430-45I26.06
thymus, embryo E16.CNhs11002.456-26C55.85
thymus, embryo E17.CNhs10581.478-18C111.64
thymus, embryo E18.CNhs10595.1273-19G410.33
thymus, neonate N02.CNhs11181.1541-43F810.34
thymus, neonate N03.CNhs11137.2104-43C712.70
thymus, neonate N06.CNhs11197.681-26C411.21
thymus, neonate N07.CNhs11211.713-19D312.88
thymus, neonate N10.CNhs11194.748-24E415.12
thymus, neonate N20.CNhs11186.820-7A218.52
thymus, neonate N25.CNhs11125.1362-25G718.47
thymus, neonate N30.CNhs11132.1393-42G216.71
tongue, adult.CNhs10499.32-1B43.17
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.86
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.01
urinary bladder, adult.CNhs10481.879-12E41.55
uterus, adult pregnant day19.CNhs10497.590-15F52.44
uterus, adult.CNhs10509.92-27E57.88
vagina, adult.CNhs10502.89-27D54.07
vesicular gland, adult.CNhs10491.51-27F83.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A110.73
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A28.75
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.17
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D712.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A410.96
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A511.33
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.13
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A712.16
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.97
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A914.50
whole body, embryo E11.CNhs11014.324-5I83.94
whole body, embryo E12.CNhs10587.857-27C911.57
whole body, embryo E13.CNhs10512.372-23H27.00
whole body, embryo E14.5.CNhs10578.420-27D29.72
whole body, embryo E14.CNhs10519.395-14B12.93
whole body, embryo E16.CNhs10514.453-14F23.86
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.78
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.57
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.72
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.12
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.00
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.72
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.64
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.28
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.94
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.08
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.01
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.07
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.95
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.40
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.07
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.86
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.43
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.94
whole body, embryo E17.5.CNhs10513.490-9F94.24
whole body, embryo E17.CNhs10517.475-3I54.00
whole body, embryo E18.CNhs10516.493-3B34.91
whole body, neonate N00.CNhs10525.657-19C24.73
whole body, neonate N01.CNhs10576.659-23C64.21
whole body, neonate N06.CNhs10515.692-21D12.21
whole body, neonate N10.CNhs10518.761-6B43.25





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system1.04e-0873
neurectoderm2.33e-0864
neural plate2.33e-0864
presumptive neural plate2.33e-0864
ectoderm-derived structure3.37e-0895
ectoderm3.37e-0895
presumptive ectoderm3.37e-0895
nervous system8.58e-0875
ecto-epithelium1.16e-0773
pre-chordal neural plate3.36e-0749
anterior region of body8.52e-0743







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:63157069..63157099,-&oldid=2319539"