FFCP PHASE1:Mm9::chr10:101144309..101144320,+: Difference between revisions
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|id=chr10:101144309..101144320,+ | |id=chr10:101144309..101144320,+ | ||
|ontology_enrichment_celltype=CL:0000117!3.45e-18!23;CL:0000337!3.45e-18!23;CL:0000540!1.24e-10!33;CL:0000047!1.24e-10!33;CL:0000031!1.24e-10!33;CL:0000404!1.24e-10!33;CL:0000393!4.80e-08!39;CL:0000211!4.80e-08!39;CL:0000221!3.85e-07!44;CL:0000133!3.85e-07!44;CL:0002319!9.39e-07!43 | |ontology_enrichment_celltype=CL:0000117!3.45e-18!23;CL:0000337!3.45e-18!23;CL:0000540!1.24e-10!33;CL:0000047!1.24e-10!33;CL:0000031!1.24e-10!33;CL:0000404!1.24e-10!33;CL:0000393!4.80e-08!39;CL:0000211!4.80e-08!39;CL:0000221!3.85e-07!44;CL:0000133!3.85e-07!44;CL:0002319!9.39e-07!43 | ||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.51e-13,3;CL:0000117,2.24e-11,23;CL:0000337,2.24e-11,23;CL:0000540,1.28e-07,33;CL:0000047,1.28e-07,33;CL:0000031,1.28e-07,33;CL:0000404,1.28e-07,33;CL:0002612,4.56e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!8.85e-26!63;UBERON:0002020!2.17e-23!34;UBERON:0001049!2.82e-23!52;UBERON:0005068!2.82e-23!52;UBERON:0006241!2.82e-23!52;UBERON:0007135!2.82e-23!52;UBERON:0002346!1.62e-22!71;UBERON:0003075!1.62e-22!71;UBERON:0007284!1.62e-22!71;UBERON:0003056!5.12e-22!49;UBERON:0000955!6.07e-22!50;UBERON:0006238!6.07e-22!50;UBERON:0002616!8.62e-21!49;UBERON:0001017!1.28e-20!73;UBERON:0005743!1.28e-20!73;UBERON:0000073!1.08e-19!75;UBERON:0001016!1.08e-19!75;UBERON:0002791!1.58e-18!29;UBERON:0003528!1.58e-18!29;UBERON:0001893!1.58e-18!29;UBERON:0004121!1.87e-18!102;UBERON:0000924!1.87e-18!102;UBERON:0006601!1.87e-18!102;UBERON:0003080!4.99e-17!40;UBERON:0002780!6.14e-16!39;UBERON:0001890!6.14e-16!39;UBERON:0006240!6.14e-16!39;UBERON:0007811!3.89e-15!86;UBERON:0000153!1.03e-12!94;UBERON:0000956!3.68e-11!21;UBERON:0001869!3.68e-11!21;UBERON:0000203!3.68e-11!21;UBERON:0002619!1.08e-09!17;UBERON:0002420!4.77e-09!8;UBERON:0007245!4.77e-09!8;UBERON:0010009!4.77e-09!8;UBERON:0010011!4.77e-09!8;UBERON:0000454!4.77e-09!8;UBERON:0002298!1.85e-07!6;UBERON:0002240!3.04e-07!6;UBERON:0005174!3.04e-07!6;UBERON:0001137!3.04e-07!6;UBERON:0002021!3.55e-07!10;UBERON:0000411!3.55e-07!10;UBERON:0001950!3.55e-07!10;UBERON:0003076!6.70e-07!12;UBERON:0003057!6.70e-07!12 | |ontology_enrichment_uberon=UBERON:0000033!8.85e-26!63;UBERON:0002020!2.17e-23!34;UBERON:0001049!2.82e-23!52;UBERON:0005068!2.82e-23!52;UBERON:0006241!2.82e-23!52;UBERON:0007135!2.82e-23!52;UBERON:0002346!1.62e-22!71;UBERON:0003075!1.62e-22!71;UBERON:0007284!1.62e-22!71;UBERON:0003056!5.12e-22!49;UBERON:0000955!6.07e-22!50;UBERON:0006238!6.07e-22!50;UBERON:0002616!8.62e-21!49;UBERON:0001017!1.28e-20!73;UBERON:0005743!1.28e-20!73;UBERON:0000073!1.08e-19!75;UBERON:0001016!1.08e-19!75;UBERON:0002791!1.58e-18!29;UBERON:0003528!1.58e-18!29;UBERON:0001893!1.58e-18!29;UBERON:0004121!1.87e-18!102;UBERON:0000924!1.87e-18!102;UBERON:0006601!1.87e-18!102;UBERON:0003080!4.99e-17!40;UBERON:0002780!6.14e-16!39;UBERON:0001890!6.14e-16!39;UBERON:0006240!6.14e-16!39;UBERON:0007811!3.89e-15!86;UBERON:0000153!1.03e-12!94;UBERON:0000956!3.68e-11!21;UBERON:0001869!3.68e-11!21;UBERON:0000203!3.68e-11!21;UBERON:0002619!1.08e-09!17;UBERON:0002420!4.77e-09!8;UBERON:0007245!4.77e-09!8;UBERON:0010009!4.77e-09!8;UBERON:0010011!4.77e-09!8;UBERON:0000454!4.77e-09!8;UBERON:0002298!1.85e-07!6;UBERON:0002240!3.04e-07!6;UBERON:0005174!3.04e-07!6;UBERON:0001137!3.04e-07!6;UBERON:0002021!3.55e-07!10;UBERON:0000411!3.55e-07!10;UBERON:0001950!3.55e-07!10;UBERON:0003076!6.70e-07!12;UBERON:0003057!6.70e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.21e-24,54;UBERON:0001017,1.78e-19,73;UBERON:0001016,6.97e-19,75;UBERON:0001049,4.85e-17,52;UBERON:0005068,4.85e-17,52;UBERON:0006241,4.85e-17,52;UBERON:0007135,4.85e-17,52;UBERON:0000955,1.60e-16,47;UBERON:0006238,1.60e-16,47;UBERON:0002616,2.47e-14,46;UBERON:0004121,2.53e-14,95;UBERON:0000924,2.53e-14,95;UBERON:0006601,2.53e-14,95;UBERON:0003080,2.90e-14,40;UBERON:0002020,3.88e-14,34;UBERON:0004684,1.51e-13,3;UBERON:0002275,1.51e-13,3;UBERON:0002346,2.17e-13,64;UBERON:0003075,2.17e-13,64;UBERON:0007284,2.17e-13,64;UBERON:0002780,3.95e-12,39;UBERON:0001890,3.95e-12,39;UBERON:0006240,3.95e-12,39;UBERON:0010371,1.95e-11,73;UBERON:0003056,2.74e-11,49;UBERON:0003528,4.32e-11,29;UBERON:0002791,4.32e-11,29;UBERON:0001893,4.32e-11,29;UBERON:0010314,1.47e-08,92;UBERON:0002257,4.56e-07,3;UBERON:0000956,4.82e-07,21;UBERON:0001869,4.82e-07,21;UBERON:0000203,4.82e-07,21 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,0.528990979272033,0,0,0,0,0,0,0,0,0.414758449233911,0,0.210324961351382,0.856952953211411,0.220868540951614,0.857435594504678,0.191690942036473,1.83843757322004,1.10115880999389,1.27687338085188,1.0752457327937,0.395658863190582,0.548925861614458,1.04182674111352,0.279182999001381,0.56276261003168,1.98637722109853,2.06240009831567,1.56608848879013,0.559198337475902,0,0,0,0,0,0.539703191637817,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0.41889341362691,0,0,0,0,2.99581278809645,0.915001205637253,2.38743269014442,1.04294592115366,1.53429274398198,2.28566849015516,1.78465389374533,0,0,0,0.210441855886474,0.130120442962704,0,0.180062129805349,0.452114453507145,0.612328492361951,0.512454881139399,0.562210347358373,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89260953707715,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,1.05490517932983,0,0,0,0,0,0,0,0,0,0,0,3.85585579706168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.460325236507177,1.14579102687879,0.859265911718438,0,0,0.675022500231806,0.900642406448441,0.906284817968409,1.03552062350364,0,0,0,0.243106717068294,0,0,0.888986911206461,0,0,0.505394423527595,0.25347929989024,0.565879024158229,0.37456602987953,0.0640251524048693,0.287177344778066,0.952587382566147,0.347652977834566,0.192909220463705,0,0.883193520806384,0,0.354951612318675,0,0.290692833264657,0.376437521661322,0.25384382367503,0.182927972872773,0.263069711437843,0.407412341537585,0,0.118635018124174,0.29551344712669,0.409231043169689,0.309873682371932,0.771626443924566,0.249810577937946,0,0.429742108096597,0,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,0.528990979272033,0,0,0,0,0,0,0,0,0.414758449233911,0,0.210324961351382,0.856952953211411,0.220868540951614,0.857435594504678,0.191690942036473,1.83843757322004,1.10115880999389,1.27687338085188,1.0752457327937,0.395658863190582,0.548925861614458,1.04182674111352,0.279182999001381,0.56276261003168,1.98637722109853,2.06240009831567,1.56608848879013,0.559198337475902,0,0,0,0,0,0.539703191637817,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0.41889341362691,0,0,0,0,2.99581278809645,0.915001205637253,2.38743269014442,1.04294592115366,1.53429274398198,2.28566849015516,1.78465389374533,0,0,0,0.210441855886474,0.130120442962704,0,0.180062129805349,0.452114453507145,0.612328492361951,0.512454881139399,0.562210347358373,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89260953707715,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80275294993896,1.05490517932983,0,0,0,0,0,0,0,0,0,0,0,3.85585579706168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.460325236507177,1.14579102687879,0.859265911718438,0,0,0.675022500231806,0.900642406448441,0.906284817968409,1.03552062350364,0,0,0,0.243106717068294,0,0,0.888986911206461,0,0,0.505394423527595,0.25347929989024,0.565879024158229,0.37456602987953,0.0640251524048693,0.287177344778066,0.952587382566147,0.347652977834566,0.192909220463705,0,0.883193520806384,0,0.354951612318675,0,0.290692833264657,0.376437521661322,0.25384382367503,0.182927972872773,0.263069711437843,0.407412341537585,0,0.118635018124174,0.29551344712669,0.409231043169689,0.309873682371932,0.771626443924566,0.249810577937946,0,0.429742108096597,0,0.220591419119515,0 | ||
|short_description=p11@Mgat4c | |short_description=p11@Mgat4c | ||
}} | }} |
Revision as of 10:12, 14 November 2012
Short description: | p11@Mgat4c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_Mgat4c_5end |
Coexpression cluster: | MCL_coexpression_mm9:251 |
Association with transcript: | 34bp_to_ENSMUST00000127504, ENSMUST00000134930_5end |
EntrezGene: | Mgat4c |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.51e-13 | 3 |
CNS neuron (sensu Vertebrata) | 2.24e-11 | 23 |
neuroblast (sensu Vertebrata) | 2.24e-11 | 23 |
neuron | 1.28e-07 | 33 |
neuronal stem cell | 1.28e-07 | 33 |
neuroblast | 1.28e-07 | 33 |
electrically signaling cell | 1.28e-07 | 33 |
neuron of the ventral spinal cord | 4.56e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 4.21e-24 | 54 |
central nervous system | 1.78e-19 | 73 |
nervous system | 6.97e-19 | 75 |
neural tube | 4.85e-17 | 52 |
neural rod | 4.85e-17 | 52 |
future spinal cord | 4.85e-17 | 52 |
neural keel | 4.85e-17 | 52 |
brain | 1.60e-16 | 47 |
future brain | 1.60e-16 | 47 |
regional part of brain | 2.47e-14 | 46 |
ectoderm-derived structure | 2.53e-14 | 95 |
ectoderm | 2.53e-14 | 95 |
presumptive ectoderm | 2.53e-14 | 95 |
anterior neural tube | 2.90e-14 | 40 |
gray matter | 3.88e-14 | 34 |
raphe nuclei | 1.51e-13 | 3 |
reticular formation | 1.51e-13 | 3 |
neurectoderm | 2.17e-13 | 64 |
neural plate | 2.17e-13 | 64 |
presumptive neural plate | 2.17e-13 | 64 |
regional part of forebrain | 3.95e-12 | 39 |
forebrain | 3.95e-12 | 39 |
future forebrain | 3.95e-12 | 39 |
ecto-epithelium | 1.95e-11 | 73 |
pre-chordal neural plate | 2.74e-11 | 49 |
brain grey matter | 4.32e-11 | 29 |
regional part of telencephalon | 4.32e-11 | 29 |
telencephalon | 4.32e-11 | 29 |
structure with developmental contribution from neural crest | 1.47e-08 | 92 |
ventral horn of spinal cord | 4.56e-07 | 3 |
cerebral cortex | 4.82e-07 | 21 |
cerebral hemisphere | 4.82e-07 | 21 |
pallium | 4.82e-07 | 21 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.