FFCP PHASE1:Mm9::chr4:77694800..77694811,-: Difference between revisions
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|id=chr4:77694800..77694811,- | |id=chr4:77694800..77694811,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!8.89e-41!10;UBERON:0000411!8.89e-41!10;UBERON:0001950!8.89e-41!10;UBERON:0002619!8.05e-30!17;UBERON:0000956!5.47e-24!21;UBERON:0001869!5.47e-24!21;UBERON:0000203!5.47e-24!21;UBERON:0002020!7.47e-18!34;UBERON:0002791!3.91e-17!29;UBERON:0003528!3.91e-17!29;UBERON:0001893!3.91e-17!29;UBERON:0002780!1.67e-12!39;UBERON:0001890!1.67e-12!39;UBERON:0006240!1.67e-12!39;UBERON:0003080!3.62e-12!40;UBERON:0002616!5.10e-12!49;UBERON:0000955!9.34e-12!50;UBERON:0006238!9.34e-12!50;UBERON:0001049!2.69e-11!52;UBERON:0005068!2.69e-11!52;UBERON:0006241!2.69e-11!52;UBERON:0007135!2.69e-11!52;UBERON:0003056!9.41e-10!49;UBERON:0001017!2.21e-09!73;UBERON:0005743!2.21e-09!73;UBERON:0000073!4.26e-09!75;UBERON:0001016!4.26e-09!75;UBERON:0000033!4.31e-09!63;UBERON:0002346!5.85e-08!71;UBERON:0003075!5.85e-08!71;UBERON:0007284!5.85e-08!71;UBERON:0001851!1.33e-07!1;UBERON:0005889!1.33e-07!1;UBERON:0000470!1.33e-07!1 | |ontology_enrichment_uberon=UBERON:0002021!8.89e-41!10;UBERON:0000411!8.89e-41!10;UBERON:0001950!8.89e-41!10;UBERON:0002619!8.05e-30!17;UBERON:0000956!5.47e-24!21;UBERON:0001869!5.47e-24!21;UBERON:0000203!5.47e-24!21;UBERON:0002020!7.47e-18!34;UBERON:0002791!3.91e-17!29;UBERON:0003528!3.91e-17!29;UBERON:0001893!3.91e-17!29;UBERON:0002780!1.67e-12!39;UBERON:0001890!1.67e-12!39;UBERON:0006240!1.67e-12!39;UBERON:0003080!3.62e-12!40;UBERON:0002616!5.10e-12!49;UBERON:0000955!9.34e-12!50;UBERON:0006238!9.34e-12!50;UBERON:0001049!2.69e-11!52;UBERON:0005068!2.69e-11!52;UBERON:0006241!2.69e-11!52;UBERON:0007135!2.69e-11!52;UBERON:0003056!9.41e-10!49;UBERON:0001017!2.21e-09!73;UBERON:0005743!2.21e-09!73;UBERON:0000073!4.26e-09!75;UBERON:0001016!4.26e-09!75;UBERON:0000033!4.31e-09!63;UBERON:0002346!5.85e-08!71;UBERON:0003075!5.85e-08!71;UBERON:0007284!5.85e-08!71;UBERON:0001851!1.33e-07!1;UBERON:0005889!1.33e-07!1;UBERON:0000470!1.33e-07!1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.77e-52,10;UBERON:0000411,2.77e-52,10;UBERON:0001950,2.77e-52,10;UBERON:0002619,4.81e-31,17;UBERON:0000956,3.00e-25,21;UBERON:0001869,3.00e-25,21;UBERON:0000203,3.00e-25,21;UBERON:0003528,1.94e-18,29;UBERON:0002791,1.94e-18,29;UBERON:0001893,1.94e-18,29;UBERON:0002020,8.43e-16,34;UBERON:0002780,7.80e-14,39;UBERON:0001890,7.80e-14,39;UBERON:0006240,7.80e-14,39;UBERON:0003080,1.69e-13,40;UBERON:0002616,8.56e-12,46;UBERON:0000955,1.50e-11,47;UBERON:0006238,1.50e-11,47;UBERON:0003056,4.27e-11,49;UBERON:0001049,1.77e-10,52;UBERON:0005068,1.77e-10,52;UBERON:0006241,1.77e-10,52;UBERON:0007135,1.77e-10,52;UBERON:0000073,4.19e-10,54;UBERON:0002346,1.41e-08,64;UBERON:0003075,1.41e-08,64;UBERON:0007284,1.41e-08,64;UBERON:0010371,1.48e-07,73;UBERON:0001017,1.48e-07,73;UBERON:0001016,2.31e-07,75 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511430914660661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,2.30162618253588,1.14579102687879,4.29632955859219,0,0,2.02506750069542,0.45032120322422,1.81256963593682,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511430914660661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,2.30162618253588,1.14579102687879,4.29632955859219,0,0,2.02506750069542,0.45032120322422,1.81256963593682,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr4:77694800..77694811,- | |short_description=p@chr4:77694800..77694811,- | ||
}} | }} |
Revision as of 09:56, 14 November 2012
Short description: | p@chr4:77694800..77694811, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:77694800..77694811, - |
Coexpression cluster: | MCL_coexpression_mm9:135 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 2.77e-52 | 10 |
visual cortex | 2.77e-52 | 10 |
neocortex | 2.77e-52 | 10 |
regional part of cerebral cortex | 4.81e-31 | 17 |
cerebral cortex | 3.00e-25 | 21 |
cerebral hemisphere | 3.00e-25 | 21 |
pallium | 3.00e-25 | 21 |
brain grey matter | 1.94e-18 | 29 |
regional part of telencephalon | 1.94e-18 | 29 |
telencephalon | 1.94e-18 | 29 |
gray matter | 8.43e-16 | 34 |
regional part of forebrain | 7.80e-14 | 39 |
forebrain | 7.80e-14 | 39 |
future forebrain | 7.80e-14 | 39 |
anterior neural tube | 1.69e-13 | 40 |
regional part of brain | 8.56e-12 | 46 |
brain | 1.50e-11 | 47 |
future brain | 1.50e-11 | 47 |
pre-chordal neural plate | 4.27e-11 | 49 |
neural tube | 1.77e-10 | 52 |
neural rod | 1.77e-10 | 52 |
future spinal cord | 1.77e-10 | 52 |
neural keel | 1.77e-10 | 52 |
regional part of nervous system | 4.19e-10 | 54 |
neurectoderm | 1.41e-08 | 64 |
neural plate | 1.41e-08 | 64 |
presumptive neural plate | 1.41e-08 | 64 |
ecto-epithelium | 1.48e-07 | 73 |
central nervous system | 1.48e-07 | 73 |
nervous system | 2.31e-07 | 75 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.