FFCP PHASE1:Mm9::chr2:71205830..71205854,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 7: | Line 7: | ||
|id=chr2:71205830..71205854,- | |id=chr2:71205830..71205854,- | ||
|ontology_enrichment_celltype=CL:0000393!2.29e-12!39;CL:0000211!2.29e-12!39;CL:0000540!2.07e-11!33;CL:0000047!2.07e-11!33;CL:0000031!2.07e-11!33;CL:0000404!2.07e-11!33;CL:0000221!4.67e-11!44;CL:0000133!4.67e-11!44;CL:0000055!6.14e-11!50;CL:0002319!9.80e-11!43;CL:0000117!4.22e-08!23;CL:0000337!4.22e-08!23 | |ontology_enrichment_celltype=CL:0000393!2.29e-12!39;CL:0000211!2.29e-12!39;CL:0000540!2.07e-11!33;CL:0000047!2.07e-11!33;CL:0000031!2.07e-11!33;CL:0000404!2.07e-11!33;CL:0000221!4.67e-11!44;CL:0000133!4.67e-11!44;CL:0000055!6.14e-11!50;CL:0002319!9.80e-11!43;CL:0000117!4.22e-08!23;CL:0000337!4.22e-08!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000393,7.05e-13,39;CL:0000211,7.05e-13,39;CL:0000540,7.26e-12,33;CL:0000047,7.26e-12,33;CL:0000031,7.26e-12,33;CL:0000404,7.26e-12,33;CL:0000221,2.94e-11,44;CL:0000133,2.94e-11,44;CL:0002319,6.40e-11,43;CL:0000117,2.26e-08,23;CL:0000337,2.26e-08,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!9.09e-15!102;UBERON:0000924!9.09e-15!102;UBERON:0006601!9.09e-15!102;UBERON:0001017!2.01e-14!73;UBERON:0005743!2.01e-14!73;UBERON:0000073!4.08e-14!75;UBERON:0001016!4.08e-14!75;UBERON:0002346!1.90e-10!71;UBERON:0003075!1.90e-10!71;UBERON:0007284!1.90e-10!71;UBERON:0000033!2.74e-09!63;UBERON:0001049!4.18e-09!52;UBERON:0005068!4.18e-09!52;UBERON:0006241!4.18e-09!52;UBERON:0007135!4.18e-09!52;UBERON:0000955!3.24e-08!50;UBERON:0006238!3.24e-08!50;UBERON:0002616!8.05e-08!49;UBERON:0002020!1.91e-07!34;UBERON:0000489!5.39e-07!21;UBERON:0000475!6.03e-07!200 | |ontology_enrichment_uberon=UBERON:0004121!9.09e-15!102;UBERON:0000924!9.09e-15!102;UBERON:0006601!9.09e-15!102;UBERON:0001017!2.01e-14!73;UBERON:0005743!2.01e-14!73;UBERON:0000073!4.08e-14!75;UBERON:0001016!4.08e-14!75;UBERON:0002346!1.90e-10!71;UBERON:0003075!1.90e-10!71;UBERON:0007284!1.90e-10!71;UBERON:0000033!2.74e-09!63;UBERON:0001049!4.18e-09!52;UBERON:0005068!4.18e-09!52;UBERON:0006241!4.18e-09!52;UBERON:0007135!4.18e-09!52;UBERON:0000955!3.24e-08!50;UBERON:0006238!3.24e-08!50;UBERON:0002616!8.05e-08!49;UBERON:0002020!1.91e-07!34;UBERON:0000489!5.39e-07!21;UBERON:0000475!6.03e-07!200 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.63e-14,73;UBERON:0001016,3.33e-14,75;UBERON:0004121,4.05e-14,95;UBERON:0000924,4.05e-14,95;UBERON:0006601,4.05e-14,95;UBERON:0010314,1.80e-10,92;UBERON:0000073,7.14e-10,54;UBERON:0010371,7.92e-10,73;UBERON:0002346,1.01e-09,64;UBERON:0003075,1.01e-09,64;UBERON:0007284,1.01e-09,64;UBERON:0001049,5.04e-09,52;UBERON:0005068,5.04e-09,52;UBERON:0006241,5.04e-09,52;UBERON:0007135,5.04e-09,52;UBERON:0002020,9.83e-08,34;UBERON:0000489,2.91e-07,21;UBERON:0000955,6.02e-07,47;UBERON:0006238,6.02e-07,47 | |||
|phase1_expression=2.24208385946712,0,0,0,0,0.503637815735669,0.233612640595526,0.129123323441576,0,0,0.34243593645101,0.159544317990673,0.856003649656029,0.262261207256992,0,1.01237633694913,0,0.473193248037357,0.411343300817216,0.84877930359606,1.53077922271926,2.38298282882125,1.56719873483361,0.47997726838022,0,0,0.430761996159075,0.215471232685889,0,0.504060259519861,0.221730510655305,0.635030673459631,0.61506478758457,0,0,0.166234645358492,0.408338712524738,3.34825304589526,2.3440060335714,2.09409497589519,3.52938892818609,2.73218193983378,1.94204141212461,5.5394599909254,5.37297735463427,2.20256102594018,0.782391344348039,1.74420125104357,3.29529274101708,3.30530828426282,1.81982348112971,1.43752564364972,0.335565212115473,0.725362142011344,0,1.02903774414379,3.43840127926508,1.03134418455488,2.42779753031517,1.5869729378161,1.90149421051854,1.0165335962074,2.66788438833342,1.3498495759221,0.988866362566974,0.7104801149461,0.599200221036809,2.68952813725088,1.45165457231869,2.29510095163874,0.630974884054146,4.57041575046086,4.63823935998388,2.81728838194394,3.1629005436018,6.43453150627015,2.20231761998777,4.34136949489638,6.91229399653096,3.56092976871523,3.20206752608434,1.56274011167028,3.35019598801657,5.06486349028512,5.50073691996516,4.71405736757868,3.55929201997757,2.60959224155421,1.28734528666413,1.28471652181535,2.31891590961342,0,0,0.539703191637817,1.29955283489534,0.896053774194671,1.40444420131752,2.72688516124892,2.07828803682295,2.47337702157238,2.81686839553361,5.13305909657271,2.54805239706646,7.11066703153331,0.216491041011214,0,0,0.91347103775248,2.33044095282455,3.71105347662062,1.56136794089522,1.21786191324856,0.461230994512117,1.80867168663147,4.23319345688537,1.88499886994513,0.247194967734374,0.722996784599558,0.884610551949874,2.10296904931632,1.32504911076236,0.969750506270444,0,3.22058876712702,2.72280718857492,0.255457055208591,2.51611761462433,2.99951365496704,3.30382590389968,3.2953940669061,3.20250421973039,2.01046963380583,2.25971616249959,2.55715457330331,2.70124457927428,2.75810147215188,3.1570202793598,1.99051152976149,2.27450482590307,1.05220927943237,1.17108398666433,1.37941262660084,0.900310649026746,2.10986744970001,1.97305847538851,2.17793324484245,1.68663104207512,2.06962696591213,0,1.13463648100692,0.351902248327898,1.31517439456545,1.39023624612799,1.39300866608867,0.823128545631774,0.796137067273973,1.40442637462647,1.80143534980301,1.13665399758237,0.828503090142008,1.40715635988658,0.36012412292203,1.18372367792605,0.787056926989615,1.23413690309903,1.39520366850245,0.536546802799238,3.26942958628075,1.97471819896177,3.77585167381919,1.86458261955468,2.92399974850665,1.53685080703735,2.28150911892632,2.52347938276953,2.88132914661996,0,0.793351699990633,1.91959425481711,0.928946687441754,0.515469845288373,1.21010114774006,0.889512175379481,0.570676878337677,0,0.658795818896044,1.50801125280162,0.795825888164603,1.16978452271472,0,0.432276099749388,0.199141273254367,0.948339504765408,1.94222471436539,0,2.03651327845314,2.90928730751439,3.43665517462561,5.31186911843761,5.90440591918409,6.12295038581362,7.03363834354263,0.889357881261447,0,0.196558995113203,0.224862112384854,0.202860121388503,0,0,0.575392274901621,1.78348749452539,0.274561413188081,1.43768206527355,3.34926852901653,1.24815069245824,1.76805214562978,0.179397413521912,3.85954817090694,1.10851914099963,0.37898282354097,0.488894929326078,0.678980343100753,1.17345124144251,0.670025029767263,0.952174563544055,1.17080188714679,1.7339865851681,2.6575762757853,1.43509291791738,1.14704320301017,1.55416483679306,1.44649058581512,3.01582567878545,0.54390568381871,0.491764273019036,1.10374698521893,4.0137647496948,4.45404409050372,1.3114795630134,3.7870639080656,2.2085575359138,3.12350995437311,3.23135096599198,3.82350076724083,2.89638276307112,4.24614796183249,3.64329631507405,2.33804686329049,1.97643888973262,3.53453448063988,4.9679029822894,1.24645922567079,2.44330439030364,3.62934270539578,1.32745138339963,0.728341908464944,2.72091201268276,1.88605079755898,2.65771703592696,0.614870295887855,1.55056975900933,3.63533729477506,3.56497378384721,1.8962205476149,1.05418608574999,6.18813259489121,1.36175842301515,0.900305470156551,1.16422815404479,0.643011105094777,1.59606210278046,1.07021290561242,1.81003922662333,3.34911444026059,1.40803024838226,0.42366414172764,3.08739757276947,1.48397627647332,1.93757312035087,1.68876189798836,1.3130957840345,1.96969079694074,0,3.33765543618917,0.512612642393558,1.03193433981611,1.11116716421827,1.31857919903284,0.820165366326151,0.686334519619568,3.73952545986482,1.95932033253121,3.04039942369732,3.81868247206045,0.632671987162271,1.82987520414164,1.72808545314882,0.836353184057875,0.436725127492355,1.34864346384821,1.73572257023205,2.09404753587224,0.518459893167171,6.21339313086926,0.56369293868419,0.747582730219894,0.992750942742586,1.36115831840833,1.29159823477731,1.01373675294467,1.5256441023948,1.43224823328345,0.734015410979976,0.241584120826006,0.288030006257865,0.316011120628178,1.21635129174099,1.1298205288131,1.55904987573354,1.07416017400489,0.79472541912506,0.480781798079875,0.738447635872886,0.605798699688886,0.457240839929999,0.604957110821043,0.779663045918019,0.865906574762965,0.818138315270983,1.81384306892169,0.221985953374065,0.179427713218951,0,1.54551675225752,1.87682475451182,2.74727436400898,2.14368379079066,8.02515366456581,1.12950368523413,1.38097570952153,2.86447756719698,1.20297227640581,1.37016503954128,2.2661816921691,1.35004500046361,4.05289082901798,0.453142408984205,1.03552062350364,1.03787347584177,1.59609949360412,0.341467211508268,1.70174701947806,0.628839487883947,1.10306105070008,0.666740183404846,1.03017528619447,0.64183841918363,1.76888048234658,0.50695859978048,0.754505365544305,0.655490552289177,0.704276676453562,1.14870937911227,1.90517476513229,1.50649623728312,1.54327376370964,0.412085900803307,0.883193520806384,0,0.887379030796687,1.43061713968393,1.16277133305863,1.03520318456864,1.18460451048347,1.46342378298218,0.526139422875686,0.950628796921032,0.561142271657738,0.949080144993393,0.591026894253381,0,0.77468420592983,1.35034627686799,1.74867404556562,0.701794825336225,1.50409737833809,3.25190164517034,1.54413993383661,1.62307484934295 | |phase1_expression=2.24208385946712,0,0,0,0,0.503637815735669,0.233612640595526,0.129123323441576,0,0,0.34243593645101,0.159544317990673,0.856003649656029,0.262261207256992,0,1.01237633694913,0,0.473193248037357,0.411343300817216,0.84877930359606,1.53077922271926,2.38298282882125,1.56719873483361,0.47997726838022,0,0,0.430761996159075,0.215471232685889,0,0.504060259519861,0.221730510655305,0.635030673459631,0.61506478758457,0,0,0.166234645358492,0.408338712524738,3.34825304589526,2.3440060335714,2.09409497589519,3.52938892818609,2.73218193983378,1.94204141212461,5.5394599909254,5.37297735463427,2.20256102594018,0.782391344348039,1.74420125104357,3.29529274101708,3.30530828426282,1.81982348112971,1.43752564364972,0.335565212115473,0.725362142011344,0,1.02903774414379,3.43840127926508,1.03134418455488,2.42779753031517,1.5869729378161,1.90149421051854,1.0165335962074,2.66788438833342,1.3498495759221,0.988866362566974,0.7104801149461,0.599200221036809,2.68952813725088,1.45165457231869,2.29510095163874,0.630974884054146,4.57041575046086,4.63823935998388,2.81728838194394,3.1629005436018,6.43453150627015,2.20231761998777,4.34136949489638,6.91229399653096,3.56092976871523,3.20206752608434,1.56274011167028,3.35019598801657,5.06486349028512,5.50073691996516,4.71405736757868,3.55929201997757,2.60959224155421,1.28734528666413,1.28471652181535,2.31891590961342,0,0,0.539703191637817,1.29955283489534,0.896053774194671,1.40444420131752,2.72688516124892,2.07828803682295,2.47337702157238,2.81686839553361,5.13305909657271,2.54805239706646,7.11066703153331,0.216491041011214,0,0,0.91347103775248,2.33044095282455,3.71105347662062,1.56136794089522,1.21786191324856,0.461230994512117,1.80867168663147,4.23319345688537,1.88499886994513,0.247194967734374,0.722996784599558,0.884610551949874,2.10296904931632,1.32504911076236,0.969750506270444,0,3.22058876712702,2.72280718857492,0.255457055208591,2.51611761462433,2.99951365496704,3.30382590389968,3.2953940669061,3.20250421973039,2.01046963380583,2.25971616249959,2.55715457330331,2.70124457927428,2.75810147215188,3.1570202793598,1.99051152976149,2.27450482590307,1.05220927943237,1.17108398666433,1.37941262660084,0.900310649026746,2.10986744970001,1.97305847538851,2.17793324484245,1.68663104207512,2.06962696591213,0,1.13463648100692,0.351902248327898,1.31517439456545,1.39023624612799,1.39300866608867,0.823128545631774,0.796137067273973,1.40442637462647,1.80143534980301,1.13665399758237,0.828503090142008,1.40715635988658,0.36012412292203,1.18372367792605,0.787056926989615,1.23413690309903,1.39520366850245,0.536546802799238,3.26942958628075,1.97471819896177,3.77585167381919,1.86458261955468,2.92399974850665,1.53685080703735,2.28150911892632,2.52347938276953,2.88132914661996,0,0.793351699990633,1.91959425481711,0.928946687441754,0.515469845288373,1.21010114774006,0.889512175379481,0.570676878337677,0,0.658795818896044,1.50801125280162,0.795825888164603,1.16978452271472,0,0.432276099749388,0.199141273254367,0.948339504765408,1.94222471436539,0,2.03651327845314,2.90928730751439,3.43665517462561,5.31186911843761,5.90440591918409,6.12295038581362,7.03363834354263,0.889357881261447,0,0.196558995113203,0.224862112384854,0.202860121388503,0,0,0.575392274901621,1.78348749452539,0.274561413188081,1.43768206527355,3.34926852901653,1.24815069245824,1.76805214562978,0.179397413521912,3.85954817090694,1.10851914099963,0.37898282354097,0.488894929326078,0.678980343100753,1.17345124144251,0.670025029767263,0.952174563544055,1.17080188714679,1.7339865851681,2.6575762757853,1.43509291791738,1.14704320301017,1.55416483679306,1.44649058581512,3.01582567878545,0.54390568381871,0.491764273019036,1.10374698521893,4.0137647496948,4.45404409050372,1.3114795630134,3.7870639080656,2.2085575359138,3.12350995437311,3.23135096599198,3.82350076724083,2.89638276307112,4.24614796183249,3.64329631507405,2.33804686329049,1.97643888973262,3.53453448063988,4.9679029822894,1.24645922567079,2.44330439030364,3.62934270539578,1.32745138339963,0.728341908464944,2.72091201268276,1.88605079755898,2.65771703592696,0.614870295887855,1.55056975900933,3.63533729477506,3.56497378384721,1.8962205476149,1.05418608574999,6.18813259489121,1.36175842301515,0.900305470156551,1.16422815404479,0.643011105094777,1.59606210278046,1.07021290561242,1.81003922662333,3.34911444026059,1.40803024838226,0.42366414172764,3.08739757276947,1.48397627647332,1.93757312035087,1.68876189798836,1.3130957840345,1.96969079694074,0,3.33765543618917,0.512612642393558,1.03193433981611,1.11116716421827,1.31857919903284,0.820165366326151,0.686334519619568,3.73952545986482,1.95932033253121,3.04039942369732,3.81868247206045,0.632671987162271,1.82987520414164,1.72808545314882,0.836353184057875,0.436725127492355,1.34864346384821,1.73572257023205,2.09404753587224,0.518459893167171,6.21339313086926,0.56369293868419,0.747582730219894,0.992750942742586,1.36115831840833,1.29159823477731,1.01373675294467,1.5256441023948,1.43224823328345,0.734015410979976,0.241584120826006,0.288030006257865,0.316011120628178,1.21635129174099,1.1298205288131,1.55904987573354,1.07416017400489,0.79472541912506,0.480781798079875,0.738447635872886,0.605798699688886,0.457240839929999,0.604957110821043,0.779663045918019,0.865906574762965,0.818138315270983,1.81384306892169,0.221985953374065,0.179427713218951,0,1.54551675225752,1.87682475451182,2.74727436400898,2.14368379079066,8.02515366456581,1.12950368523413,1.38097570952153,2.86447756719698,1.20297227640581,1.37016503954128,2.2661816921691,1.35004500046361,4.05289082901798,0.453142408984205,1.03552062350364,1.03787347584177,1.59609949360412,0.341467211508268,1.70174701947806,0.628839487883947,1.10306105070008,0.666740183404846,1.03017528619447,0.64183841918363,1.76888048234658,0.50695859978048,0.754505365544305,0.655490552289177,0.704276676453562,1.14870937911227,1.90517476513229,1.50649623728312,1.54327376370964,0.412085900803307,0.883193520806384,0,0.887379030796687,1.43061713968393,1.16277133305863,1.03520318456864,1.18460451048347,1.46342378298218,0.526139422875686,0.950628796921032,0.561142271657738,0.949080144993393,0.591026894253381,0,0.77468420592983,1.35034627686799,1.74867404556562,0.701794825336225,1.50409737833809,3.25190164517034,1.54413993383661,1.62307484934295 | ||
|short_description=p3@Slc25a12 | |short_description=p3@Slc25a12 | ||
}} | }} |
Revision as of 06:32, 14 November 2012
Short description: | p3@Slc25a12 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Slc25a12_5end |
Coexpression cluster: | NA |
Association with transcript: | -24bp_to_ENSMUST00000151937_5end |
EntrezGene: | Slc25a12 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 7.05e-13 | 39 |
electrically active cell | 7.05e-13 | 39 |
neuron | 7.26e-12 | 33 |
neuronal stem cell | 7.26e-12 | 33 |
neuroblast | 7.26e-12 | 33 |
electrically signaling cell | 7.26e-12 | 33 |
ectodermal cell | 2.94e-11 | 44 |
neurectodermal cell | 2.94e-11 | 44 |
neural cell | 6.40e-11 | 43 |
CNS neuron (sensu Vertebrata) | 2.26e-08 | 23 |
neuroblast (sensu Vertebrata) | 2.26e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.63e-14 | 73 |
nervous system | 3.33e-14 | 75 |
ectoderm-derived structure | 4.05e-14 | 95 |
ectoderm | 4.05e-14 | 95 |
presumptive ectoderm | 4.05e-14 | 95 |
structure with developmental contribution from neural crest | 1.80e-10 | 92 |
regional part of nervous system | 7.14e-10 | 54 |
ecto-epithelium | 7.92e-10 | 73 |
neurectoderm | 1.01e-09 | 64 |
neural plate | 1.01e-09 | 64 |
presumptive neural plate | 1.01e-09 | 64 |
neural tube | 5.04e-09 | 52 |
neural rod | 5.04e-09 | 52 |
future spinal cord | 5.04e-09 | 52 |
neural keel | 5.04e-09 | 52 |
gray matter | 9.83e-08 | 34 |
cavitated compound organ | 2.91e-07 | 21 |
brain | 6.02e-07 | 47 |
future brain | 6.02e-07 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.