FFCP PHASE1:Mm9::chr7:17402080..17402093,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 7: | Line 7: | ||
|id=chr7:17402080..17402093,- | |id=chr7:17402080..17402093,- | ||
|ontology_enrichment_celltype=CL:0002319!4.36e-13!43;CL:0000055!2.59e-12!50;CL:0000221!2.84e-12!44;CL:0000133!2.84e-12!44;CL:0000540!8.46e-09!33;CL:0000047!8.46e-09!33;CL:0000031!8.46e-09!33;CL:0000404!8.46e-09!33;CL:0000393!1.14e-08!39;CL:0000211!1.14e-08!39;CL:0000117!9.52e-07!23;CL:0000337!9.52e-07!23 | |ontology_enrichment_celltype=CL:0002319!4.36e-13!43;CL:0000055!2.59e-12!50;CL:0000221!2.84e-12!44;CL:0000133!2.84e-12!44;CL:0000540!8.46e-09!33;CL:0000047!8.46e-09!33;CL:0000031!8.46e-09!33;CL:0000404!8.46e-09!33;CL:0000393!1.14e-08!39;CL:0000211!1.14e-08!39;CL:0000117!9.52e-07!23;CL:0000337!9.52e-07!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,4.36e-13,43;CL:0000221,2.84e-12,44;CL:0000133,2.84e-12,44;CL:0000540,8.46e-09,33;CL:0000047,8.46e-09,33;CL:0000031,8.46e-09,33;CL:0000404,8.46e-09,33;CL:0000393,1.14e-08,39;CL:0000211,1.14e-08,39;CL:0000117,9.52e-07,23;CL:0000337,9.52e-07,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.51e-23!73;UBERON:0005743!3.51e-23!73;UBERON:0000073!7.56e-23!75;UBERON:0001016!7.56e-23!75;UBERON:0001049!1.52e-15!52;UBERON:0005068!1.52e-15!52;UBERON:0006241!1.52e-15!52;UBERON:0007135!1.52e-15!52;UBERON:0004121!1.52e-14!102;UBERON:0000924!1.52e-14!102;UBERON:0006601!1.52e-14!102;UBERON:0000955!2.88e-14!50;UBERON:0006238!2.88e-14!50;UBERON:0002616!7.83e-14!49;UBERON:0002346!6.45e-11!71;UBERON:0003075!6.45e-11!71;UBERON:0007284!6.45e-11!71;UBERON:0000033!6.85e-11!63;UBERON:0000025!1.01e-10!114;UBERON:0003080!1.50e-10!40;UBERON:0002780!2.69e-10!39;UBERON:0001890!2.69e-10!39;UBERON:0006240!2.69e-10!39;UBERON:0004111!3.05e-10!122;UBERON:0002020!4.43e-10!34;UBERON:0003056!2.33e-08!49;UBERON:0002791!1.05e-07!29;UBERON:0003528!1.05e-07!29;UBERON:0001893!1.05e-07!29;UBERON:0003103!2.87e-07!43 | |ontology_enrichment_uberon=UBERON:0001017!3.51e-23!73;UBERON:0005743!3.51e-23!73;UBERON:0000073!7.56e-23!75;UBERON:0001016!7.56e-23!75;UBERON:0001049!1.52e-15!52;UBERON:0005068!1.52e-15!52;UBERON:0006241!1.52e-15!52;UBERON:0007135!1.52e-15!52;UBERON:0004121!1.52e-14!102;UBERON:0000924!1.52e-14!102;UBERON:0006601!1.52e-14!102;UBERON:0000955!2.88e-14!50;UBERON:0006238!2.88e-14!50;UBERON:0002616!7.83e-14!49;UBERON:0002346!6.45e-11!71;UBERON:0003075!6.45e-11!71;UBERON:0007284!6.45e-11!71;UBERON:0000033!6.85e-11!63;UBERON:0000025!1.01e-10!114;UBERON:0003080!1.50e-10!40;UBERON:0002780!2.69e-10!39;UBERON:0001890!2.69e-10!39;UBERON:0006240!2.69e-10!39;UBERON:0004111!3.05e-10!122;UBERON:0002020!4.43e-10!34;UBERON:0003056!2.33e-08!49;UBERON:0002791!1.05e-07!29;UBERON:0003528!1.05e-07!29;UBERON:0001893!1.05e-07!29;UBERON:0003103!2.87e-07!43 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.51e-23,73;UBERON:0001016,7.56e-23,75;UBERON:0004121,2.96e-17,95;UBERON:0000924,2.96e-17,95;UBERON:0006601,2.96e-17,95;UBERON:0000073,1.87e-16,54;UBERON:0001049,1.52e-15,52;UBERON:0005068,1.52e-15,52;UBERON:0006241,1.52e-15,52;UBERON:0007135,1.52e-15,52;UBERON:0010314,7.19e-15,92;UBERON:0002346,7.86e-14,64;UBERON:0003075,7.86e-14,64;UBERON:0007284,7.86e-14,64;UBERON:0000955,3.45e-13,47;UBERON:0006238,3.45e-13,47;UBERON:0002616,9.21e-13,46;UBERON:0000025,1.01e-10,114;UBERON:0003080,1.50e-10,40;UBERON:0002780,2.69e-10,39;UBERON:0001890,2.69e-10,39;UBERON:0006240,2.69e-10,39;UBERON:0004111,3.05e-10,122;UBERON:0002020,4.43e-10,34;UBERON:0010371,4.73e-10,73;UBERON:0003056,2.33e-08,49;UBERON:0003528,1.05e-07,29;UBERON:0002791,1.05e-07,29;UBERON:0001893,1.05e-07,29;UBERON:0003103,2.87e-07,43 | |||
|phase1_expression=3.52327463630547,2.79180326111489,2.72999543633722,3.32710632437513,5.50985302940982,1.84667199103079,3.97141489012394,8.13476937681931,8.024957162645,11.2350972634557,11.1291679346578,10.9287857823611,7.19043065711064,7.86783621770977,10.3264026162855,4.656931149966,8.39474253753776,6.30924330716475,6.7186072466812,6.79023442876848,5.44277056966847,7.4468213400664,7.31359409589019,4.7997726838022,4.12936705920906,1.14846392823004,2.58457197695445,3.44753972297422,4.18051522804023,3.02436155711917,4.21287970245079,6.98533740805594,11.6862309641068,0,1.1554064790051,2.32728503501889,1.83752420636132,4.60384793810598,1.5626706890476,2.61761871986899,2.94115744015507,8.87959130445979,1.45653105909346,5.5394599909254,4.56196190487815,6.05704282133549,32.0780451182696,22.2385659508055,20.4308149943059,25.0814569805826,12.3188051030319,24.4379359420452,7.55021727259814,5.07753499407941,10.0828139742739,13.1202312378333,11.747871037489,18.0485232297105,11.7343547298567,11.1088105647127,8.87363964908651,17.958760199664,15.1180115338894,22.497492932035,21.7550599764734,26.9982443679518,22.7696083993988,23.0530983192933,6.42875596312561,7.1553147315796,6.94072372459561,18.2816630018434,20.0990372265968,8.45186514583183,6.13411014516713,11.9498442259303,7.70811166995721,16.343979274904,16.2822925251618,12.0016521834476,12.5338071735301,13.022834263919,16.4717969410815,7.87867654044352,13.7518422999129,12.374400589894,12.1015928679237,15.6575534493252,6.96680978665293,7.3304413303582,5.2175607966302,5.16254326188832,7.47968467078526,8.09554787456726,9.74664626171504,7.6164570806547,10.1119982494861,4.94247935476367,3.11743205523443,7.42013106471715,4.22530259330042,5.13305909657271,0,0,15.3708639117962,13.4280728701802,12.6381111253696,6.73684890342454,9.06282592765101,4.45326417194474,5.72501578328248,6.69824052286711,5.5347719341454,5.87818298155228,4.46837087115678,4.52399728786832,8.89901883843746,5.63937491987655,12.3845477272982,6.14714029800155,6.8460870722722,3.87900202508178,5.59175283654366,12.0040126774734,9.63454851341893,4.59822699375465,5.39168060276641,4.19931911695385,3.30382590389968,10.1857634795279,9.15001205637253,6.03140890141749,9.21268897019065,7.41574826257959,16.4152555202052,8.92326946872667,6.00852246716866,7.46441823660558,8.08712826987759,7.78634866779954,6.50602214813519,6.89706313300419,10.4436035287103,6.63101198477146,5.51095643125756,4.48398020996974,5.43470002446427,5.69147415625834,11.4251036254406,9.07709184805532,10.9089696981648,8.32943783224784,5.56094498451196,5.92028683087683,5.35033554660653,4.77682240364384,5.61770549850588,6.69104558498259,5.96743348730745,14.4988040774851,7.03578179943289,11.523971933505,14.2046841351126,8.26409773339096,8.4846912088058,9.99895962426754,13.1453966685813,7.35621656913168,6.91151369636618,13.1333971263276,10.8632204791447,12.2807989437279,9.66020507280623,13.0180226197561,8.62188789112922,5.24813523134351,5.94753809370836,1.85115396664481,7.25180051819795,7.19933682767359,8.63411990858025,7.05892336181699,8.00560957841533,3.99473814836374,3.32170343081158,4.77626968699632,3.51869292320377,2.98434708061726,3.31438948102504,1.79763881730844,1.51296634912286,3.98282546508734,11.0007382552787,7.65465034485183,7.88954149711563,6.10953983535943,8.53390943537553,4.62896411276103,6.57659986092276,5.31396532726568,5.33795674660674,7.40382983530803,4.74324203339438,6.84064933435986,4.52085688760367,6.74586337154561,6.8972441272091,6.51178331331525,4.83789118384698,4.60313819921297,6.64754429777645,3.29473695825698,5.75072826109418,3.34926852901653,3.74445207737473,4.2938409251009,4.30553792452589,3.37710464954357,7.7596339869974,7.39016505904891,8.8001087278694,6.78980343100753,6.33663670378956,11.3904255060435,8.09348379012447,7.80534591431195,4.25614889086716,4.4292937929755,8.13219320153184,7.37384916220821,5.35323443784276,6.94315481191256,24.1266054302836,14.1415477792864,6.88469982226651,6.89841865761831,10.2752377592187,8.79087649441524,5.40985319743029,17.1680230498974,10.7272794601527,8.98009111882268,11.8482868753039,12.6653462914853,9.80314165962534,11.0399847007645,14.9779959619711,14.028281179743,10.2774822266096,12.5315313404505,6.52924391958036,8.54714897602825,3.74640006513225,7.9185659026817,6.63725691699814,6.5550771761845,4.83717691143602,4.52652191414155,8.85905678642318,12.2974059177571,5.42699415653264,5.81653967164009,7.48644494607915,8.84902922220285,7.37930260024991,10.3135543248187,10.5536277783674,9.36317688962813,7.1147276080515,8.14480733120051,12.2364761213169,13.1992925025532,10.0374902567294,15.5277124048446,6.33613611772018,7.83778662196135,8.82113592219848,8.57408515295696,5.32832608096488,3.86002719540197,3.70054266409723,3.11867709515616,3.49777003955821,9.08583979851498,7.34744787430767,7.84270098260245,5.55583582109135,4.89757988212197,4.64760374251486,3.88922894451088,4.24946074984638,3.77868921273877,3.59319931891502,8.59203556213602,13.1279437336171,7.5228202836934,4.75223499615926,3.3454127362315,4.80397640241591,4.72025212346872,5.95104881222419,3.92633912976044,2.98114438571124,12.4267862617385,2.81846469342095,8.67195967055077,7.44563207056939,7.00024278038572,6.58715099736429,5.91346439217724,5.28107573905893,3.1249052362548,3.25063967719704,1.20792060413003,2.88030006257865,4.4241556887945,5.87903124341476,4.72470402958205,5.06691209613401,8.59328139203911,6.15912199821921,4.32703618271888,6.35064966850682,5.04832249740738,3.42930629947499,4.83965688656834,4.67797827550812,5.00301576529713,6.778860326531,7.48210265930198,8.21348027484039,7.53596395519596,7.05115388729129,9.07991091951295,8.25802891985201,7.3260649706906,5.14484109789758,6.52043735245972,18.0720589637461,14.2700823317225,10.8850147553485,14.0919609521824,17.1270629942661,12.8416962556249,10.8003600037089,14.8605997063993,13.1411298605419,17.6038505995619,3.73634451303036,1.19707462020309,8.36594668195257,9.48116196566347,4.40187641518763,5.51530525350042,4.88942801163553,7.2112270033613,5.45562656306086,6.57012750585873,9.37873409593887,6.03604292435444,6.08669798554236,7.10679191694049,6.31790158511746,11.4310485907938,6.72129090480162,5.40145817298374,6.59337441285291,9.42073088860143,7.20025430009372,3.90446773550542,4.76872379894642,4.79643174886684,5.64656282491984,5.33072029717562,4.75612729469209,7.10288220882176,5.29636043998861,7.2948495315506,7.82991119619549,4.23569274214923,6.13846564754534,6.8172210121825,8.10207766120794,8.74337022782811,7.25187986180766,8.80971321598023,8.7992632751668,7.50010825006353,6.72416723299222 | |phase1_expression=3.52327463630547,2.79180326111489,2.72999543633722,3.32710632437513,5.50985302940982,1.84667199103079,3.97141489012394,8.13476937681931,8.024957162645,11.2350972634557,11.1291679346578,10.9287857823611,7.19043065711064,7.86783621770977,10.3264026162855,4.656931149966,8.39474253753776,6.30924330716475,6.7186072466812,6.79023442876848,5.44277056966847,7.4468213400664,7.31359409589019,4.7997726838022,4.12936705920906,1.14846392823004,2.58457197695445,3.44753972297422,4.18051522804023,3.02436155711917,4.21287970245079,6.98533740805594,11.6862309641068,0,1.1554064790051,2.32728503501889,1.83752420636132,4.60384793810598,1.5626706890476,2.61761871986899,2.94115744015507,8.87959130445979,1.45653105909346,5.5394599909254,4.56196190487815,6.05704282133549,32.0780451182696,22.2385659508055,20.4308149943059,25.0814569805826,12.3188051030319,24.4379359420452,7.55021727259814,5.07753499407941,10.0828139742739,13.1202312378333,11.747871037489,18.0485232297105,11.7343547298567,11.1088105647127,8.87363964908651,17.958760199664,15.1180115338894,22.497492932035,21.7550599764734,26.9982443679518,22.7696083993988,23.0530983192933,6.42875596312561,7.1553147315796,6.94072372459561,18.2816630018434,20.0990372265968,8.45186514583183,6.13411014516713,11.9498442259303,7.70811166995721,16.343979274904,16.2822925251618,12.0016521834476,12.5338071735301,13.022834263919,16.4717969410815,7.87867654044352,13.7518422999129,12.374400589894,12.1015928679237,15.6575534493252,6.96680978665293,7.3304413303582,5.2175607966302,5.16254326188832,7.47968467078526,8.09554787456726,9.74664626171504,7.6164570806547,10.1119982494861,4.94247935476367,3.11743205523443,7.42013106471715,4.22530259330042,5.13305909657271,0,0,15.3708639117962,13.4280728701802,12.6381111253696,6.73684890342454,9.06282592765101,4.45326417194474,5.72501578328248,6.69824052286711,5.5347719341454,5.87818298155228,4.46837087115678,4.52399728786832,8.89901883843746,5.63937491987655,12.3845477272982,6.14714029800155,6.8460870722722,3.87900202508178,5.59175283654366,12.0040126774734,9.63454851341893,4.59822699375465,5.39168060276641,4.19931911695385,3.30382590389968,10.1857634795279,9.15001205637253,6.03140890141749,9.21268897019065,7.41574826257959,16.4152555202052,8.92326946872667,6.00852246716866,7.46441823660558,8.08712826987759,7.78634866779954,6.50602214813519,6.89706313300419,10.4436035287103,6.63101198477146,5.51095643125756,4.48398020996974,5.43470002446427,5.69147415625834,11.4251036254406,9.07709184805532,10.9089696981648,8.32943783224784,5.56094498451196,5.92028683087683,5.35033554660653,4.77682240364384,5.61770549850588,6.69104558498259,5.96743348730745,14.4988040774851,7.03578179943289,11.523971933505,14.2046841351126,8.26409773339096,8.4846912088058,9.99895962426754,13.1453966685813,7.35621656913168,6.91151369636618,13.1333971263276,10.8632204791447,12.2807989437279,9.66020507280623,13.0180226197561,8.62188789112922,5.24813523134351,5.94753809370836,1.85115396664481,7.25180051819795,7.19933682767359,8.63411990858025,7.05892336181699,8.00560957841533,3.99473814836374,3.32170343081158,4.77626968699632,3.51869292320377,2.98434708061726,3.31438948102504,1.79763881730844,1.51296634912286,3.98282546508734,11.0007382552787,7.65465034485183,7.88954149711563,6.10953983535943,8.53390943537553,4.62896411276103,6.57659986092276,5.31396532726568,5.33795674660674,7.40382983530803,4.74324203339438,6.84064933435986,4.52085688760367,6.74586337154561,6.8972441272091,6.51178331331525,4.83789118384698,4.60313819921297,6.64754429777645,3.29473695825698,5.75072826109418,3.34926852901653,3.74445207737473,4.2938409251009,4.30553792452589,3.37710464954357,7.7596339869974,7.39016505904891,8.8001087278694,6.78980343100753,6.33663670378956,11.3904255060435,8.09348379012447,7.80534591431195,4.25614889086716,4.4292937929755,8.13219320153184,7.37384916220821,5.35323443784276,6.94315481191256,24.1266054302836,14.1415477792864,6.88469982226651,6.89841865761831,10.2752377592187,8.79087649441524,5.40985319743029,17.1680230498974,10.7272794601527,8.98009111882268,11.8482868753039,12.6653462914853,9.80314165962534,11.0399847007645,14.9779959619711,14.028281179743,10.2774822266096,12.5315313404505,6.52924391958036,8.54714897602825,3.74640006513225,7.9185659026817,6.63725691699814,6.5550771761845,4.83717691143602,4.52652191414155,8.85905678642318,12.2974059177571,5.42699415653264,5.81653967164009,7.48644494607915,8.84902922220285,7.37930260024991,10.3135543248187,10.5536277783674,9.36317688962813,7.1147276080515,8.14480733120051,12.2364761213169,13.1992925025532,10.0374902567294,15.5277124048446,6.33613611772018,7.83778662196135,8.82113592219848,8.57408515295696,5.32832608096488,3.86002719540197,3.70054266409723,3.11867709515616,3.49777003955821,9.08583979851498,7.34744787430767,7.84270098260245,5.55583582109135,4.89757988212197,4.64760374251486,3.88922894451088,4.24946074984638,3.77868921273877,3.59319931891502,8.59203556213602,13.1279437336171,7.5228202836934,4.75223499615926,3.3454127362315,4.80397640241591,4.72025212346872,5.95104881222419,3.92633912976044,2.98114438571124,12.4267862617385,2.81846469342095,8.67195967055077,7.44563207056939,7.00024278038572,6.58715099736429,5.91346439217724,5.28107573905893,3.1249052362548,3.25063967719704,1.20792060413003,2.88030006257865,4.4241556887945,5.87903124341476,4.72470402958205,5.06691209613401,8.59328139203911,6.15912199821921,4.32703618271888,6.35064966850682,5.04832249740738,3.42930629947499,4.83965688656834,4.67797827550812,5.00301576529713,6.778860326531,7.48210265930198,8.21348027484039,7.53596395519596,7.05115388729129,9.07991091951295,8.25802891985201,7.3260649706906,5.14484109789758,6.52043735245972,18.0720589637461,14.2700823317225,10.8850147553485,14.0919609521824,17.1270629942661,12.8416962556249,10.8003600037089,14.8605997063993,13.1411298605419,17.6038505995619,3.73634451303036,1.19707462020309,8.36594668195257,9.48116196566347,4.40187641518763,5.51530525350042,4.88942801163553,7.2112270033613,5.45562656306086,6.57012750585873,9.37873409593887,6.03604292435444,6.08669798554236,7.10679191694049,6.31790158511746,11.4310485907938,6.72129090480162,5.40145817298374,6.59337441285291,9.42073088860143,7.20025430009372,3.90446773550542,4.76872379894642,4.79643174886684,5.64656282491984,5.33072029717562,4.75612729469209,7.10288220882176,5.29636043998861,7.2948495315506,7.82991119619549,4.23569274214923,6.13846564754534,6.8172210121825,8.10207766120794,8.74337022782811,7.25187986180766,8.80971321598023,8.7992632751668,7.50010825006353,6.72416723299222 | ||
|short_description=p1@Fkrp | |short_description=p1@Fkrp | ||
}} | }} |
Revision as of 06:04, 14 November 2012
Short description: | p1@Fkrp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Fkrp_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_173430, uc009fic.1, uc009fid.1_5end |
EntrezGene: | Fkrp |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 4.36e-13 | 43 |
ectodermal cell | 2.84e-12 | 44 |
neurectodermal cell | 2.84e-12 | 44 |
neuron | 8.46e-09 | 33 |
neuronal stem cell | 8.46e-09 | 33 |
neuroblast | 8.46e-09 | 33 |
electrically signaling cell | 8.46e-09 | 33 |
electrically responsive cell | 1.14e-08 | 39 |
electrically active cell | 1.14e-08 | 39 |
CNS neuron (sensu Vertebrata) | 9.52e-07 | 23 |
neuroblast (sensu Vertebrata) | 9.52e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.51e-23 | 73 |
nervous system | 7.56e-23 | 75 |
ectoderm-derived structure | 2.96e-17 | 95 |
ectoderm | 2.96e-17 | 95 |
presumptive ectoderm | 2.96e-17 | 95 |
regional part of nervous system | 1.87e-16 | 54 |
neural tube | 1.52e-15 | 52 |
neural rod | 1.52e-15 | 52 |
future spinal cord | 1.52e-15 | 52 |
neural keel | 1.52e-15 | 52 |
structure with developmental contribution from neural crest | 7.19e-15 | 92 |
neurectoderm | 7.86e-14 | 64 |
neural plate | 7.86e-14 | 64 |
presumptive neural plate | 7.86e-14 | 64 |
brain | 3.45e-13 | 47 |
future brain | 3.45e-13 | 47 |
regional part of brain | 9.21e-13 | 46 |
tube | 1.01e-10 | 114 |
anterior neural tube | 1.50e-10 | 40 |
regional part of forebrain | 2.69e-10 | 39 |
forebrain | 2.69e-10 | 39 |
future forebrain | 2.69e-10 | 39 |
anatomical conduit | 3.05e-10 | 122 |
gray matter | 4.43e-10 | 34 |
ecto-epithelium | 4.73e-10 | 73 |
pre-chordal neural plate | 2.33e-08 | 49 |
brain grey matter | 1.05e-07 | 29 |
regional part of telencephalon | 1.05e-07 | 29 |
telencephalon | 1.05e-07 | 29 |
compound organ | 2.87e-07 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.