FFCP PHASE1:Mm9::chr11:48613859..48613871,+: Difference between revisions
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|id=chr11:48613859..48613871,+ | |id=chr11:48613859..48613871,+ | ||
|ontology_enrichment_celltype=CL:0000144!5.53e-20!121;CL:0000012!5.53e-20!121;CL:0000063!1.60e-19!66;CL:0000548!6.42e-19!115;CL:0000004!6.42e-19!115;CL:0000255!6.42e-19!115;CL:0000034!2.02e-18!97;CL:0002371!2.61e-18!118;CL:0002320!4.13e-18!46;CL:0000134!4.13e-18!46;CL:0000219!7.92e-18!54;CL:0000988!2.16e-16!32;CL:0002032!2.16e-16!32;CL:0000037!2.16e-16!32;CL:0000566!2.16e-16!32;CL:0000837!2.16e-16!32;CL:0000723!4.71e-16!91;CL:0000048!4.71e-16!91;CL:0002031!6.38e-13!25;CL:0000049!3.66e-09!19;CL:0000738!6.12e-09!17;CL:0002087!6.12e-09!17;CL:0000838!1.13e-08!12;CL:0000542!2.00e-08!13;CL:0000051!2.00e-08!13;CL:0000084!3.85e-08!11;CL:0000827!3.85e-08!11;CL:0000763!2.72e-07!16;CL:0000791!5.26e-07!9;CL:0000789!5.26e-07!9;CL:0002420!5.26e-07!9;CL:0002419!5.26e-07!9;CL:0000790!5.26e-07!9 | |ontology_enrichment_celltype=CL:0000144!5.53e-20!121;CL:0000012!5.53e-20!121;CL:0000063!1.60e-19!66;CL:0000548!6.42e-19!115;CL:0000004!6.42e-19!115;CL:0000255!6.42e-19!115;CL:0000034!2.02e-18!97;CL:0002371!2.61e-18!118;CL:0002320!4.13e-18!46;CL:0000134!4.13e-18!46;CL:0000219!7.92e-18!54;CL:0000988!2.16e-16!32;CL:0002032!2.16e-16!32;CL:0000037!2.16e-16!32;CL:0000566!2.16e-16!32;CL:0000837!2.16e-16!32;CL:0000723!4.71e-16!91;CL:0000048!4.71e-16!91;CL:0002031!6.38e-13!25;CL:0000049!3.66e-09!19;CL:0000738!6.12e-09!17;CL:0002087!6.12e-09!17;CL:0000838!1.13e-08!12;CL:0000542!2.00e-08!13;CL:0000051!2.00e-08!13;CL:0000084!3.85e-08!11;CL:0000827!3.85e-08!11;CL:0000763!2.72e-07!16;CL:0000791!5.26e-07!9;CL:0000789!5.26e-07!9;CL:0002420!5.26e-07!9;CL:0002419!5.26e-07!9;CL:0000790!5.26e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000034,2.02e-18,97;CL:0002320,4.13e-18,46;CL:0000134,4.13e-18,46;CL:0000219,7.92e-18,54;CL:0000988,2.16e-16,32;CL:0002032,2.16e-16,32;CL:0000037,2.16e-16,32;CL:0000837,2.16e-16,32;CL:0000723,4.71e-16,91;CL:0000048,4.71e-16,91;CL:0002031,6.38e-13,25;CL:0000049,3.66e-09,19;CL:0000738,6.12e-09,17;CL:0002087,6.12e-09,17;CL:0000838,1.13e-08,12;CL:0000542,2.00e-08,13;CL:0000051,2.00e-08,13;CL:0000084,3.85e-08,11;CL:0000827,3.85e-08,11;CL:0000763,2.72e-07,16;CL:0000791,5.26e-07,9;CL:0000789,5.26e-07,9;CL:0002420,5.26e-07,9;CL:0002419,5.26e-07,9;CL:0000790,5.26e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!4.13e-18!46;UBERON:0002371!8.78e-08!16;UBERON:0002193!2.14e-07!48;UBERON:0002390!4.18e-07!45;UBERON:0003061!4.18e-07!45 | |ontology_enrichment_uberon=UBERON:0002384!4.13e-18!46;UBERON:0002371!8.78e-08!16;UBERON:0002193!2.14e-07!48;UBERON:0002390!4.18e-07!45;UBERON:0003061!4.18e-07!45 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.13e-18,46;UBERON:0002371,8.78e-08,16;UBERON:0002193,2.14e-07,48;UBERON:0002405,2.14e-07,48;UBERON:0002390,4.18e-07,45;UBERON:0003061,4.18e-07,45 | |||
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| ||
|short_description=p1@Gnb2l1 | |short_description=p1@Gnb2l1 | ||
}} | }} |
Revision as of 05:07, 14 November 2012
Short description: | p1@Gnb2l1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gnb2l1_5end |
Coexpression cluster: | MCL_coexpression_mm9:653 |
Association with transcript: | 0bp_to_ENSMUST00000020640, ENSMUST00000139959, NM_008143, uc007ipa.1, uc007ipb.1_5end |
EntrezGene: | Gnb2l1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 2.02e-18 | 97 |
connective tissue cell | 4.13e-18 | 46 |
mesenchymal cell | 4.13e-18 | 46 |
motile cell | 7.92e-18 | 54 |
hematopoietic cell | 2.16e-16 | 32 |
hematopoietic oligopotent progenitor cell | 2.16e-16 | 32 |
hematopoietic stem cell | 2.16e-16 | 32 |
hematopoietic multipotent progenitor cell | 2.16e-16 | 32 |
somatic stem cell | 4.71e-16 | 91 |
multi fate stem cell | 4.71e-16 | 91 |
hematopoietic lineage restricted progenitor cell | 6.38e-13 | 25 |
common myeloid progenitor | 3.66e-09 | 19 |
leukocyte | 6.12e-09 | 17 |
nongranular leukocyte | 6.12e-09 | 17 |
lymphoid lineage restricted progenitor cell | 1.13e-08 | 12 |
lymphocyte | 2.00e-08 | 13 |
common lymphoid progenitor | 2.00e-08 | 13 |
T cell | 3.85e-08 | 11 |
pro-T cell | 3.85e-08 | 11 |
myeloid cell | 2.72e-07 | 16 |
mature alpha-beta T cell | 5.26e-07 | 9 |
alpha-beta T cell | 5.26e-07 | 9 |
immature T cell | 5.26e-07 | 9 |
mature T cell | 5.26e-07 | 9 |
immature alpha-beta T cell | 5.26e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.13e-18 | 46 |
bone marrow | 8.78e-08 | 16 |
hemolymphoid system | 2.14e-07 | 48 |
immune system | 2.14e-07 | 48 |
hematopoietic system | 4.18e-07 | 45 |
blood island | 4.18e-07 | 45 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.