FFCP PHASE1:Mm9::chrX:34731155..34731191,-: Difference between revisions
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|id=chrX:34731155..34731191,- | |id=chrX:34731155..34731191,- | ||
|ontology_enrichment_celltype=CL:0000055!5.17e-16!50;CL:0002321!1.48e-15!70;CL:0000220!1.48e-15!70;CL:0000221!2.54e-13!44;CL:0000133!2.54e-13!44;CL:0002319!5.10e-13!43;CL:0002371!1.17e-12!118;CL:0000548!1.33e-11!115;CL:0000004!1.33e-11!115;CL:0000255!1.33e-11!115;CL:0000393!2.74e-11!39;CL:0000211!2.74e-11!39;CL:0000144!3.95e-11!121;CL:0000012!3.95e-11!121;CL:0000723!1.17e-09!91;CL:0000048!1.17e-09!91;CL:0000540!9.83e-09!33;CL:0000047!9.83e-09!33;CL:0000031!9.83e-09!33;CL:0000404!9.83e-09!33;CL:0000034!1.44e-07!97;CL:0000117!7.29e-07!23;CL:0000337!7.29e-07!23 | |ontology_enrichment_celltype=CL:0000055!5.17e-16!50;CL:0002321!1.48e-15!70;CL:0000220!1.48e-15!70;CL:0000221!2.54e-13!44;CL:0000133!2.54e-13!44;CL:0002319!5.10e-13!43;CL:0002371!1.17e-12!118;CL:0000548!1.33e-11!115;CL:0000004!1.33e-11!115;CL:0000255!1.33e-11!115;CL:0000393!2.74e-11!39;CL:0000211!2.74e-11!39;CL:0000144!3.95e-11!121;CL:0000012!3.95e-11!121;CL:0000723!1.17e-09!91;CL:0000048!1.17e-09!91;CL:0000540!9.83e-09!33;CL:0000047!9.83e-09!33;CL:0000031!9.83e-09!33;CL:0000404!9.83e-09!33;CL:0000034!1.44e-07!97;CL:0000117!7.29e-07!23;CL:0000337!7.29e-07!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.48e-15,70;CL:0000221,2.54e-13,44;CL:0000133,2.54e-13,44;CL:0002319,5.10e-13,43;CL:0000393,2.74e-11,39;CL:0000211,2.74e-11,39;CL:0000723,1.17e-09,91;CL:0000048,1.17e-09,91;CL:0000540,9.83e-09,33;CL:0000047,9.83e-09,33;CL:0000031,9.83e-09,33;CL:0000404,9.83e-09,33;CL:0000034,1.44e-07,97;CL:0000117,7.29e-07,23;CL:0000337,7.29e-07,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.65e-10!75;UBERON:0001016!1.65e-10!75;UBERON:0001017!2.26e-10!73;UBERON:0005743!2.26e-10!73;UBERON:0002020!2.96e-09!34;UBERON:0004111!1.63e-08!122;UBERON:0004535!2.34e-08!23;UBERON:0001009!2.34e-08!23;UBERON:0003103!4.60e-08!43;UBERON:0007100!5.37e-08!18;UBERON:0000948!5.37e-08!18;UBERON:0005498!5.37e-08!18;UBERON:0004140!5.37e-08!18;UBERON:0009881!5.37e-08!18;UBERON:0004141!5.37e-08!18;UBERON:0003084!5.37e-08!18;UBERON:0007005!5.37e-08!18;UBERON:0004139!5.37e-08!18;UBERON:0004291!5.37e-08!18;UBERON:0000025!7.76e-08!114;UBERON:0002204!1.53e-07!32;UBERON:0002791!4.78e-07!29;UBERON:0003528!4.78e-07!29;UBERON:0001893!4.78e-07!29 | |ontology_enrichment_uberon=UBERON:0000073!1.65e-10!75;UBERON:0001016!1.65e-10!75;UBERON:0001017!2.26e-10!73;UBERON:0005743!2.26e-10!73;UBERON:0002020!2.96e-09!34;UBERON:0004111!1.63e-08!122;UBERON:0004535!2.34e-08!23;UBERON:0001009!2.34e-08!23;UBERON:0003103!4.60e-08!43;UBERON:0007100!5.37e-08!18;UBERON:0000948!5.37e-08!18;UBERON:0005498!5.37e-08!18;UBERON:0004140!5.37e-08!18;UBERON:0009881!5.37e-08!18;UBERON:0004141!5.37e-08!18;UBERON:0003084!5.37e-08!18;UBERON:0007005!5.37e-08!18;UBERON:0004139!5.37e-08!18;UBERON:0004291!5.37e-08!18;UBERON:0000025!7.76e-08!114;UBERON:0002204!1.53e-07!32;UBERON:0002791!4.78e-07!29;UBERON:0003528!4.78e-07!29;UBERON:0001893!4.78e-07!29 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.65e-10,75;UBERON:0001017,2.26e-10,73;UBERON:0002020,2.96e-09,34;UBERON:0004111,1.63e-08,122;UBERON:0010314,2.00e-08,92;UBERON:0004535,2.34e-08,23;UBERON:0001009,2.34e-08,23;UBERON:0003103,4.60e-08,43;UBERON:0007100,5.37e-08,18;UBERON:0000948,5.37e-08,18;UBERON:0005498,5.37e-08,18;UBERON:0004140,5.37e-08,18;UBERON:0009881,5.37e-08,18;UBERON:0004141,5.37e-08,18;UBERON:0003084,5.37e-08,18;UBERON:0007005,5.37e-08,18;UBERON:0004139,5.37e-08,18;UBERON:0004291,5.37e-08,18;UBERON:0000025,7.76e-08,114;UBERON:0002204,1.53e-07,32;UBERON:0003528,4.78e-07,29;UBERON:0002791,4.78e-07,29;UBERON:0001893,4.78e-07,29 | |||
|phase1_expression=15.3742893220602,12.2141392673776,15.9249733786338,9.37639055051173,4.50806156951712,10.0727563147134,10.9797941079897,5.4231795845462,2.81577444303333,2.57470978954193,5.47897498321616,4.62678522172951,6.33442700745461,5.85716696207283,11.9919514253639,10.5287139042709,17.4890469532037,8.04428521663506,7.81552271552711,8.48779303596061,10.2902381082794,9.4326403640841,12.27639008953,16.4792195477209,15.1410125504332,25.2662064210609,20.2458138194765,14.6520438226405,16.5320374927045,17.1380488236753,21.5078595335646,3.81018404075779,3.69038872550742,0,14.4425809875637,12.4675984018869,13.0668388007916,20.5080499061085,41.4107732597614,18.8468547830567,14.7057872007754,17.0761371239611,21.3624555333708,20.7729749659703,23.2153172492688,28.4497465850606,47.7258720052304,46.2213331526547,36.0285339684534,46.0798860806052,32.4768498170841,41.6882436658418,9.56360854529097,5.07753499407941,8.06625117941913,29.8420945801698,30.3725446335082,34.5500301825886,23.0640765379941,17.9856932952491,22.8179305262225,27.7852516296688,16.0073063300005,63.4429300683386,47.4655854032148,66.7851308049334,34.1544125990981,24.5899715405795,12.7538223139428,12.9605700798423,16.6156719467592,43.7046006137819,39.5354688303388,17.3936934885235,15.4311208339361,23.8996884518605,12.1127469099328,19.7915374032041,17.9719643909805,19.1235117208781,16.3762882048313,22.3992749339407,33.5019598801657,23.6360296213306,21.2389564409766,25.0434297652618,26.0540175862358,22.7407323906867,14.1607981533054,14.6608826607164,8.40607017234866,18.0689014166091,29.918738683141,26.445456390253,30.5394916200404,38.5303122903709,16.431997155415,24.8828270963964,51.6974149159709,48.0541821334063,20.281452447842,12.8326477414318,15.2883143823987,14.2213340630666,20.1336668140429,23.8158273546593,14.6602089054287,15.6431915215112,3.6251303710604,10.6878340126674,9.36820764537134,12.4830846107978,14.0675453326196,14.3186508524991,10.2302175208063,16.0853236901985,4.44950941921873,16.9181247596297,12.3845477272982,16.8237523945306,13.471332626084,15.5160081003271,7.45567044872489,11.4184510834503,9.42510180660548,7.91916871146633,19.529865294465,29.9951365496704,25.2869751875399,9.28701964309901,18.3000241127451,10.9319286338192,13.3844726548053,12.5300574091862,9.14267396062064,12.8170597823529,8.45266719957625,15.1776504144313,32.3485130795104,3.15662783829711,8.06746746368763,14.0240283704418,8.28285797104606,8.13806016312861,6.80364991513279,9.35230158079403,8.05834831213668,6.46758426847539,4.74249584452253,4.9167580843633,8.62160508403349,12.2749610159442,6.67313398141435,9.75106066262066,6.1734640922383,9.95171334092466,30.1951670544691,24.1907032687832,19.8914449576915,10.3562886267751,12.8989332989603,20.1669508836337,14.9149183418682,22.431122419204,26.5339434166291,25.3461999777945,35.1438155833501,34.6793066830493,32.0891707331287,51.0560813285986,39.0751662011025,51.7547955485676,38.4212701759339,36.5041459028211,10.9350773253346,8.43817821510132,9.58214470653014,8.99131926656051,9.81125952462076,8.82499353069666,7.60318021800351,6.6555563125703,7.56085349072559,8.94060442729028,9.96511029243474,9.71723832871664,10.8074139784116,8.75408476981064,10.1381325301942,17.0775687644302,12.1037307929829,9.95706366271836,6.63837653335786,10.7393601853145,6.76246414038483,10.1825663922657,13.1887691273986,8.06561928738663,13.4061458703425,19.4845395333075,23.3928104483648,20.4839292110189,11.858105083486,7.67487486294033,8.25547779475453,8.09503604585473,8.92584534109413,7.23531479257251,8.40265310878685,8.91858026097513,8.59316701907687,17.5719304440372,12.9391385874619,11.1642284300551,15.2898459826135,13.8918382870911,12.7372163600558,15.4381926836277,8.68339993783042,10.8010104709176,8.47417877498535,10.0149600607361,12.4385831592906,8.71032538697442,6.18913466303636,10.1469496886055,11.0344600874334,14.1737401375216,9.56728611944923,10.8149787712387,12.7786886580763,9.25753974921674,39.2057338242108,46.775888808409,14.2611639175521,14.3487108078461,13.8073507389501,14.7686725106176,11.639381121744,20.7026160307586,19.5615096038079,18.350620981942,16.5876016254255,20.5513166239195,17.8238939265915,16.4184387857523,16.5972387686707,18.704374906324,19.3691011193797,12.2102100240287,8.51640511249612,9.43747699436453,9.44744364250741,8.41347627159931,7.96470830039777,10.1967867185092,11.7906187216253,9.24164890803901,10.0402643579463,13.8345816574767,4.65170927702798,9.45187696641514,12.83390562185,12.3254335594968,16.8669773719998,24.7525303795648,7.14923172082955,7.92268813737765,8.02023839453078,12.4315480318324,6.56158864476412,12.4858172321449,11.5184314421485,10.656273219011,13.1416156515678,13.7690846061483,17.201215048287,11.7069239588451,4.52100394748536,10.9769523369244,8.95292580023523,5.25250879184196,9.91034844541493,12.9797711407357,9.7396402054776,11.144890870014,8.70414278637645,11.4904758772862,8.06495943554049,10.9813523139131,5.77926661979108,6.9975726161829,7.32459861163446,24.821436068393,6.01038387804157,7.5228202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| ||
|short_description=p2@Ndufa1 | |short_description=p2@Ndufa1 | ||
}} | }} |
Revision as of 00:48, 14 November 2012
Short description: | p2@Ndufa1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ndufa1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000016571_5end |
EntrezGene: | Ndufa1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.48e-15 | 70 |
ectodermal cell | 2.54e-13 | 44 |
neurectodermal cell | 2.54e-13 | 44 |
neural cell | 5.10e-13 | 43 |
electrically responsive cell | 2.74e-11 | 39 |
electrically active cell | 2.74e-11 | 39 |
somatic stem cell | 1.17e-09 | 91 |
multi fate stem cell | 1.17e-09 | 91 |
neuron | 9.83e-09 | 33 |
neuronal stem cell | 9.83e-09 | 33 |
neuroblast | 9.83e-09 | 33 |
electrically signaling cell | 9.83e-09 | 33 |
stem cell | 1.44e-07 | 97 |
CNS neuron (sensu Vertebrata) | 7.29e-07 | 23 |
neuroblast (sensu Vertebrata) | 7.29e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.65e-10 | 75 |
central nervous system | 2.26e-10 | 73 |
gray matter | 2.96e-09 | 34 |
anatomical conduit | 1.63e-08 | 122 |
structure with developmental contribution from neural crest | 2.00e-08 | 92 |
cardiovascular system | 2.34e-08 | 23 |
circulatory system | 2.34e-08 | 23 |
compound organ | 4.60e-08 | 43 |
primary circulatory organ | 5.37e-08 | 18 |
heart | 5.37e-08 | 18 |
primitive heart tube | 5.37e-08 | 18 |
primary heart field | 5.37e-08 | 18 |
anterior lateral plate mesoderm | 5.37e-08 | 18 |
heart tube | 5.37e-08 | 18 |
heart primordium | 5.37e-08 | 18 |
cardiac mesoderm | 5.37e-08 | 18 |
cardiogenic plate | 5.37e-08 | 18 |
heart rudiment | 5.37e-08 | 18 |
tube | 7.76e-08 | 114 |
musculoskeletal system | 1.53e-07 | 32 |
brain grey matter | 4.78e-07 | 29 |
regional part of telencephalon | 4.78e-07 | 29 |
telencephalon | 4.78e-07 | 29 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.