FFCP PHASE1:Mm9::chr7:31016741..31016809,-: Difference between revisions
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|id=chr7:31016741..31016809,- | |id=chr7:31016741..31016809,- | ||
|ontology_enrichment_celltype=CL:0000055!5.25e-18!50;CL:0000221!1.52e-16!44;CL:0000133!1.52e-16!44;CL:0002319!3.52e-16!43;CL:0002321!4.11e-16!70;CL:0000220!4.11e-16!70;CL:0000117!4.96e-14!23;CL:0000337!4.96e-14!23;CL:0000393!1.41e-12!39;CL:0000211!1.41e-12!39;CL:0000540!4.97e-11!33;CL:0000047!4.97e-11!33;CL:0000031!4.97e-11!33;CL:0000404!4.97e-11!33;CL:0002371!1.13e-10!118;CL:0000144!1.13e-09!121;CL:0000012!1.13e-09!121;CL:0000548!1.91e-09!115;CL:0000004!1.91e-09!115;CL:0000255!1.91e-09!115 | |ontology_enrichment_celltype=CL:0000055!5.25e-18!50;CL:0000221!1.52e-16!44;CL:0000133!1.52e-16!44;CL:0002319!3.52e-16!43;CL:0002321!4.11e-16!70;CL:0000220!4.11e-16!70;CL:0000117!4.96e-14!23;CL:0000337!4.96e-14!23;CL:0000393!1.41e-12!39;CL:0000211!1.41e-12!39;CL:0000540!4.97e-11!33;CL:0000047!4.97e-11!33;CL:0000031!4.97e-11!33;CL:0000404!4.97e-11!33;CL:0002371!1.13e-10!118;CL:0000144!1.13e-09!121;CL:0000012!1.13e-09!121;CL:0000548!1.91e-09!115;CL:0000004!1.91e-09!115;CL:0000255!1.91e-09!115 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.52e-16,44;CL:0000133,1.52e-16,44;CL:0002319,3.52e-16,43;CL:0002321,4.11e-16,70;CL:0000117,4.96e-14,23;CL:0000337,4.96e-14,23;CL:0000393,1.41e-12,39;CL:0000211,1.41e-12,39;CL:0000540,4.97e-11,33;CL:0000047,4.97e-11,33;CL:0000031,4.97e-11,33;CL:0000404,4.97e-11,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.02e-17!75;UBERON:0001016!1.02e-17!75;UBERON:0001017!6.71e-17!73;UBERON:0005743!6.71e-17!73;UBERON:0001049!1.11e-13!52;UBERON:0005068!1.11e-13!52;UBERON:0006241!1.11e-13!52;UBERON:0007135!1.11e-13!52;UBERON:0002020!1.45e-13!34;UBERON:0004121!5.02e-13!102;UBERON:0000924!5.02e-13!102;UBERON:0006601!5.02e-13!102;UBERON:0002346!6.43e-12!71;UBERON:0003075!6.43e-12!71;UBERON:0007284!6.43e-12!71;UBERON:0002616!9.37e-12!49;UBERON:0000955!4.80e-11!50;UBERON:0006238!4.80e-11!50;UBERON:0002791!1.49e-10!29;UBERON:0003528!1.49e-10!29;UBERON:0001893!1.49e-10!29;UBERON:0000033!2.89e-10!63;UBERON:0003080!7.77e-10!40;UBERON:0002780!1.32e-09!39;UBERON:0001890!1.32e-09!39;UBERON:0006240!1.32e-09!39;UBERON:0003056!2.97e-09!49;UBERON:0000956!7.70e-07!21;UBERON:0001869!7.70e-07!21;UBERON:0000203!7.70e-07!21 | |ontology_enrichment_uberon=UBERON:0000073!1.02e-17!75;UBERON:0001016!1.02e-17!75;UBERON:0001017!6.71e-17!73;UBERON:0005743!6.71e-17!73;UBERON:0001049!1.11e-13!52;UBERON:0005068!1.11e-13!52;UBERON:0006241!1.11e-13!52;UBERON:0007135!1.11e-13!52;UBERON:0002020!1.45e-13!34;UBERON:0004121!5.02e-13!102;UBERON:0000924!5.02e-13!102;UBERON:0006601!5.02e-13!102;UBERON:0002346!6.43e-12!71;UBERON:0003075!6.43e-12!71;UBERON:0007284!6.43e-12!71;UBERON:0002616!9.37e-12!49;UBERON:0000955!4.80e-11!50;UBERON:0006238!4.80e-11!50;UBERON:0002791!1.49e-10!29;UBERON:0003528!1.49e-10!29;UBERON:0001893!1.49e-10!29;UBERON:0000033!2.89e-10!63;UBERON:0003080!7.77e-10!40;UBERON:0002780!1.32e-09!39;UBERON:0001890!1.32e-09!39;UBERON:0006240!1.32e-09!39;UBERON:0003056!2.97e-09!49;UBERON:0000956!7.70e-07!21;UBERON:0001869!7.70e-07!21;UBERON:0000203!7.70e-07!21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.02e-17,75;UBERON:0001017,6.71e-17,73;UBERON:0000073,1.26e-14,54;UBERON:0004121,1.02e-13,95;UBERON:0000924,1.02e-13,95;UBERON:0006601,1.02e-13,95;UBERON:0001049,1.11e-13,52;UBERON:0005068,1.11e-13,52;UBERON:0006241,1.11e-13,52;UBERON:0007135,1.11e-13,52;UBERON:0002020,1.45e-13,34;UBERON:0002346,5.87e-13,64;UBERON:0003075,5.87e-13,64;UBERON:0007284,5.87e-13,64;UBERON:0010314,2.71e-12,92;UBERON:0002616,1.20e-10,46;UBERON:0003528,1.49e-10,29;UBERON:0002791,1.49e-10,29;UBERON:0001893,1.49e-10,29;UBERON:0010371,3.62e-10,73;UBERON:0000955,5.80e-10,47;UBERON:0006238,5.80e-10,47;UBERON:0003080,7.77e-10,40;UBERON:0002780,1.32e-09,39;UBERON:0001890,1.32e-09,39;UBERON:0006240,1.32e-09,39;UBERON:0003056,2.97e-09,49;UBERON:0000956,7.70e-07,21;UBERON:0001869,7.70e-07,21;UBERON:0000203,7.70e-07,21 | |||
|phase1_expression=47.2439098959142,91.4315568015126,97.8248364687502,86.5047644337534,83.1486911710936,48.0134717668005,56.5342590241172,22.3383349553927,6.61706994112834,3.97909694747389,13.3550015215894,19.3048624768714,16.9488722631894,11.6269135217267,21.6521345180181,20.2475267389826,16.7894850750755,28.5493259649205,23.0352248457641,25.8877687596798,50.2605844792822,28.3972120434532,40.7471671056739,67.0368251504374,64.6934172609419,95.8967380072084,92.6138291742011,79.0779423957213,79.809836171677,64.5197132185423,75.8318346441142,20.9560122241678,21.52726756546,47.5445043046316,34.9510459899042,43.3872424385665,35.3212986333899,108.399692360859,89.0722292757133,95.8048451472051,84.117102788435,84.0145946498888,90.7904360168257,48.7220685565484,54.0339043400013,47.7221555620372,111.88196224177,95.9310688073965,93.8060000276195,77.9663895287876,83.1519344454653,97.7517437681807,25.5029561207759,28.2891235384424,17.4768775554081,57.8833731080881,65.0430908660978,55.1769138736863,116.736597915988,128.544807963104,119.794135262668,110.124472922468,96.043837980003,117.436913105223,116.686230782903,138.54362241449,105.459238902478,120.644547870968,84.9217924806432,104.089578453733,99.9043566419065,135.684217591807,137.601101012855,80.8439274818697,89.3279789889963,84.5681283681219,59.4625757396699,69.4619119183421,66.0508093001847,105.509030184155,128.631626904988,113.038201410817,113.348297594561,103.548320245829,70.5927904728863,96.0489188644157,96.5279995817918,107.552480241198,79.6639553865096,57.7366719215841,31.3053647797812,49.044160987939,21.759082678648,38.8586297979228,32.4888208723835,23.2973981290615,35.111105032938,45.6753264509195,59.7507810586598,56.5343319216544,59.9992968248659,41.0644727725817,15.2883143823987,7.11066703153331,53.6897781707811,49.9118934985944,46.0027244963453,31.9714863213368,21.4918443427153,32.6572705942614,45.1061849591953,40.7983740938269,33.9004780966406,40.8458355897607,22.4594430629196,37.574310807573,54.6300878692966,20.8223073964673,27.4229271104461,24.5885611920062,18.5506875506731,18.9101348722737,39.1422698558057,34.255353250351,25.9713916448684,46.4931840479636,28.9952601304327,50.9917321344397,34.5631017638736,51.8275612340687,47.1225620903185,60.8167064226264,34.2433910778785,40.6587577155226,56.9339242093195,41.2092808192104,27.0892707841841,24.6325801807984,53.3245020295054,26.3052319858092,39.0361328888111,61.8436660926042,48.2566507878336,42.4987586296716,31.5008991070648,38.0497749246004,40.8539519080418,39.3229123523304,39.664510699643,28.7441241855085,34.8383225844619,36.8248830478326,32.2534809101694,20.1986256582857,33.1309239616789,36.8213393614212,54.7726286104323,47.866710723337,38.0779089190094,40.8037771894939,45.4980556363327,49.6971289632401,31.2503050972478,39.5496105812282,43.0405244955785,37.2054311600653,39.9727368085433,35.0296027101508,42.7855609775049,33.4901626721354,30.887216436971,41.5207964287944,32.9325172936576,33.2831918525722,34.0669716673886,57.9352967695371,60.1362185030512,37.8164310328868,40.5247676016944,33.906554091624,22.2940708087221,24.8070735286711,26.9077433052293,35.7624177091611,48.4019642775402,51.0566759644434,39.4596277816423,40.1892073523125,38.6028892495858,41.3456927980942,46.4696807230593,44.6076452089783,36.2265690820386,39.9869794134051,21.4144697778853,35.0280283893941,31.4203029211554,24.1968578621599,30.227064745395,45.7591458736767,37.5226959540886,46.6441279624406,23.4197575398848,16.017130148745,23.7836384086976,12.5922782935518,18.2574109249653,17.1235783424216,17.0599320693551,12.6586300478357,17.0241988113787,26.0833342528677,15.814502718009,21.5841749647732,29.3315412727687,27.5310976962352,27.2684068553307,18.332853811808,30.1147699971566,52.6786124721948,32.5929952884052,39.3808598998436,31.9178737672363,22.9483572695288,26.6608877792335,27.7089779958074,29.6354070919639,31.8909153094236,30.774770350895,39.3271955317771,33.6735714638496,29.7977060677914,37.6978209848181,67.9882104773387,26.555270743028,20.4193192265502,62.2936289152633,59.426325102247,42.4591508525589,28.5292147740941,38.1764945493671,47.2430880598933,35.5448606259118,33.4556317133573,35.2021905050183,31.9876479791381,34.408909642366,38.8700291022045,37.5523389049197,23.7777774152137,28.6718972120703,33.476333489444,27.0392352526936,25.2404288147979,17.2568679841952,39.573243693262,43.8369157598889,30.5540229204555,38.0939441816197,31.9732553861685,29.4608254211772,25.4473610634254,31.7282666762402,26.2310509086727,32.6797686582496,41.2542172992747,30.2991249120871,52.5778394571426,64.4206245238117,46.5111366018555,27.4877362145524,37.814189331639,33.0743531410263,38.0581186393249,43.8836094079138,39.8244293223982,56.6757983001252,31.1635018059397,22.9279485908186,24.9092379953284,34.6179797609096,28.7246574553857,46.6369338607761,50.8065327508797,19.8210221725509,30.9580301944834,22.4085378117351,20.5321618135113,17.0867784651281,23.3353736670653,27.7064840889984,25.7510672275531,27.5017947870803,38.1868247206045,31.0009273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| ||
|short_description=p1@Tbcb | |short_description=p1@Tbcb | ||
}} | }} |
Revision as of 00:21, 14 November 2012
Short description: | p1@Tbcb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tbcb_5end |
Coexpression cluster: | MCL_coexpression_mm9:1606 |
Association with transcript: | 238bp_to_NM_025548, uc009gds.2_5end |
EntrezGene: | Tbcb |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.52e-16 | 44 |
neurectodermal cell | 1.52e-16 | 44 |
neural cell | 3.52e-16 | 43 |
embryonic cell | 4.11e-16 | 70 |
CNS neuron (sensu Vertebrata) | 4.96e-14 | 23 |
neuroblast (sensu Vertebrata) | 4.96e-14 | 23 |
electrically responsive cell | 1.41e-12 | 39 |
electrically active cell | 1.41e-12 | 39 |
neuron | 4.97e-11 | 33 |
neuronal stem cell | 4.97e-11 | 33 |
neuroblast | 4.97e-11 | 33 |
electrically signaling cell | 4.97e-11 | 33 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.02e-17 | 75 |
central nervous system | 6.71e-17 | 73 |
regional part of nervous system | 1.26e-14 | 54 |
ectoderm-derived structure | 1.02e-13 | 95 |
ectoderm | 1.02e-13 | 95 |
presumptive ectoderm | 1.02e-13 | 95 |
neural tube | 1.11e-13 | 52 |
neural rod | 1.11e-13 | 52 |
future spinal cord | 1.11e-13 | 52 |
neural keel | 1.11e-13 | 52 |
gray matter | 1.45e-13 | 34 |
neurectoderm | 5.87e-13 | 64 |
neural plate | 5.87e-13 | 64 |
presumptive neural plate | 5.87e-13 | 64 |
structure with developmental contribution from neural crest | 2.71e-12 | 92 |
regional part of brain | 1.20e-10 | 46 |
brain grey matter | 1.49e-10 | 29 |
regional part of telencephalon | 1.49e-10 | 29 |
telencephalon | 1.49e-10 | 29 |
ecto-epithelium | 3.62e-10 | 73 |
brain | 5.80e-10 | 47 |
future brain | 5.80e-10 | 47 |
anterior neural tube | 7.77e-10 | 40 |
regional part of forebrain | 1.32e-09 | 39 |
forebrain | 1.32e-09 | 39 |
future forebrain | 1.32e-09 | 39 |
pre-chordal neural plate | 2.97e-09 | 49 |
cerebral cortex | 7.70e-07 | 21 |
cerebral hemisphere | 7.70e-07 | 21 |
pallium | 7.70e-07 | 21 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.