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FFCP PHASE1:Mm9::chr11:52060053..52060061,+: Difference between revisions

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|id=chr11:52060053..52060061,+
|id=chr11:52060053..52060061,+
|ontology_enrichment_celltype=CL:0000063!7.21e-32!66;CL:0000144!1.99e-23!121;CL:0000012!1.99e-23!121;CL:0000548!3.32e-23!115;CL:0000004!3.32e-23!115;CL:0000255!3.32e-23!115;CL:0002371!3.04e-22!118;CL:0000066!6.67e-21!25;CL:0002076!1.25e-16!15;CL:0000223!3.17e-15!20;CL:0000219!8.31e-13!54;CL:0002320!1.64e-12!46;CL:0000134!1.64e-12!46;CL:0000988!3.48e-12!32;CL:0002032!3.48e-12!32;CL:0000037!3.48e-12!32;CL:0000566!3.48e-12!32;CL:0000837!3.48e-12!32;CL:0002031!3.61e-12!25;CL:0000838!7.26e-12!12;CL:0000084!4.47e-11!11;CL:0000827!4.47e-11!11;CL:0002563!9.32e-11!9;CL:0002251!9.32e-11!9;CL:0000542!9.68e-11!13;CL:0000051!9.68e-11!13;CL:0000034!1.81e-10!97;CL:0000738!2.31e-09!17;CL:0002087!2.31e-09!17;CL:0000791!5.02e-09!9;CL:0000789!5.02e-09!9;CL:0002420!5.02e-09!9;CL:0002419!5.02e-09!9;CL:0000790!5.02e-09!9;CL:0000075!1.00e-08!7;CL:0000893!4.27e-08!6;CL:0002489!4.27e-08!6;CL:0000898!4.27e-08!6;CL:0000809!4.27e-08!6;CL:0000810!4.27e-08!6;CL:0000895!4.27e-08!6;CL:0000808!4.27e-08!6;CL:0000894!4.27e-08!6;CL:0000806!4.27e-08!6;CL:0000807!4.27e-08!6;CL:0000805!4.27e-08!6;CL:0002425!4.27e-08!6;CL:0002436!4.27e-08!6;CL:0002427!4.27e-08!6;CL:0002428!4.27e-08!6;CL:0002429!4.27e-08!6;CL:0002433!4.27e-08!6;CL:0002431!4.27e-08!6;CL:0002432!4.27e-08!6;CL:0000723!7.42e-08!91;CL:0000048!7.42e-08!91;CL:0000624!8.48e-08!8;CL:0000239!2.17e-07!6;CL:0000677!2.17e-07!6;CL:0000212!2.17e-07!6;CL:0000584!2.17e-07!6
|ontology_enrichment_celltype=CL:0000063!7.21e-32!66;CL:0000144!1.99e-23!121;CL:0000012!1.99e-23!121;CL:0000548!3.32e-23!115;CL:0000004!3.32e-23!115;CL:0000255!3.32e-23!115;CL:0002371!3.04e-22!118;CL:0000066!6.67e-21!25;CL:0002076!1.25e-16!15;CL:0000223!3.17e-15!20;CL:0000219!8.31e-13!54;CL:0002320!1.64e-12!46;CL:0000134!1.64e-12!46;CL:0000988!3.48e-12!32;CL:0002032!3.48e-12!32;CL:0000037!3.48e-12!32;CL:0000566!3.48e-12!32;CL:0000837!3.48e-12!32;CL:0002031!3.61e-12!25;CL:0000838!7.26e-12!12;CL:0000084!4.47e-11!11;CL:0000827!4.47e-11!11;CL:0002563!9.32e-11!9;CL:0002251!9.32e-11!9;CL:0000542!9.68e-11!13;CL:0000051!9.68e-11!13;CL:0000034!1.81e-10!97;CL:0000738!2.31e-09!17;CL:0002087!2.31e-09!17;CL:0000791!5.02e-09!9;CL:0000789!5.02e-09!9;CL:0002420!5.02e-09!9;CL:0002419!5.02e-09!9;CL:0000790!5.02e-09!9;CL:0000075!1.00e-08!7;CL:0000893!4.27e-08!6;CL:0002489!4.27e-08!6;CL:0000898!4.27e-08!6;CL:0000809!4.27e-08!6;CL:0000810!4.27e-08!6;CL:0000895!4.27e-08!6;CL:0000808!4.27e-08!6;CL:0000894!4.27e-08!6;CL:0000806!4.27e-08!6;CL:0000807!4.27e-08!6;CL:0000805!4.27e-08!6;CL:0002425!4.27e-08!6;CL:0002436!4.27e-08!6;CL:0002427!4.27e-08!6;CL:0002428!4.27e-08!6;CL:0002429!4.27e-08!6;CL:0002433!4.27e-08!6;CL:0002431!4.27e-08!6;CL:0002432!4.27e-08!6;CL:0000723!7.42e-08!91;CL:0000048!7.42e-08!91;CL:0000624!8.48e-08!8;CL:0000239!2.17e-07!6;CL:0000677!2.17e-07!6;CL:0000212!2.17e-07!6;CL:0000584!2.17e-07!6
|ontology_enrichment_celltype_v019_2=CL:0000066,1.48e-17,25;CL:0002076,5.05e-14,15;CL:0000223,4.33e-12,20;CL:0002031,8.50e-12,25;CL:0000084,3.00e-11,11;CL:0000827,3.00e-11,11;CL:0000791,1.78e-10,9;CL:0000789,1.78e-10,9;CL:0002420,1.78e-10,9;CL:0002419,1.78e-10,9;CL:0000790,1.78e-10,9;CL:0000838,3.35e-10,12;CL:0002320,7.60e-10,46;CL:0000134,7.60e-10,46;CL:0000542,2.58e-09,13;CL:0000051,2.58e-09,13;CL:0000219,5.72e-09,54;CL:0000738,8.55e-09,17;CL:0002087,8.55e-09,17;CL:0000624,1.10e-08,8;CL:0000068,1.30e-08,3;CL:0002202,1.30e-08,3;CL:0000069,1.30e-08,3;CL:0002632,1.30e-08,3;CL:0002368,1.30e-08,3;CL:0000307,1.30e-08,3;CL:0000377,1.30e-08,3;CL:0000988,1.32e-08,32;CL:0002032,1.32e-08,32;CL:0000037,1.32e-08,32;CL:0000837,1.32e-08,32;CL:0000893,1.76e-08,6;CL:0002489,1.76e-08,6;CL:0000898,1.76e-08,6;CL:0000809,1.76e-08,6;CL:0000810,1.76e-08,6;CL:0000895,1.76e-08,6;CL:0000808,1.76e-08,6;CL:0000894,1.76e-08,6;CL:0000806,1.76e-08,6;CL:0000807,1.76e-08,6;CL:0000805,1.76e-08,6;CL:0002425,1.76e-08,6;CL:0002436,1.76e-08,6;CL:0002427,1.76e-08,6;CL:0002428,1.76e-08,6;CL:0002429,1.76e-08,6;CL:0002433,1.76e-08,6;CL:0002431,1.76e-08,6;CL:0002432,1.76e-08,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000344!3.98e-16!15;UBERON:0000485!1.91e-13!11;UBERON:0001242!2.83e-13!13;UBERON:0000060!2.83e-13!13;UBERON:0001262!2.83e-13!13;UBERON:0004786!2.83e-13!13;UBERON:0002384!1.64e-12!46;UBERON:0003350!9.32e-11!9;UBERON:0004808!9.32e-11!9;UBERON:0001277!9.32e-11!9;UBERON:0004923!1.26e-08!24;UBERON:0000064!2.29e-07!99
|ontology_enrichment_uberon=UBERON:0000344!3.98e-16!15;UBERON:0000485!1.91e-13!11;UBERON:0001242!2.83e-13!13;UBERON:0000060!2.83e-13!13;UBERON:0001262!2.83e-13!13;UBERON:0004786!2.83e-13!13;UBERON:0002384!1.64e-12!46;UBERON:0003350!9.32e-11!9;UBERON:0004808!9.32e-11!9;UBERON:0001277!9.32e-11!9;UBERON:0004923!1.26e-08!24;UBERON:0000064!2.29e-07!99
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.88e-13,15;UBERON:0002384,7.60e-10,46;UBERON:0001242,9.45e-10,13;UBERON:0001262,9.45e-10,13;UBERON:0004786,9.45e-10,13;UBERON:0000485,4.47e-09,11;UBERON:0003126,1.30e-08,3;UBERON:0001005,1.30e-08,3;UBERON:0007196,1.30e-08,3;UBERON:0001558,1.30e-08,3;UBERON:0004923,1.21e-07,24;UBERON:0000331,1.30e-07,3;UBERON:0002116,1.30e-07,3;UBERON:0001204,1.30e-07,3;UBERON:0001168,1.30e-07,3
|phase1_expression=3.20297694209588,0.348975407639361,0.454999239389536,1.20985684522732,1.00179145989269,0.33575854382378,3.97141489012394,1.03298658753261,1.12630977721333,1.17032263160997,2.05461561870606,0.957265907944037,1.36960583944965,1.22388563386596,0,1.01237633694913,1.39912375625629,1.41957974411207,0.548457734422955,2.12194825899015,0,0.0992909512008853,4.70159620450084,4.15980299262857,5.27641346454491,1.14846392823004,1.29228598847722,0.430942465371778,10.6413114895569,1.26015064879965,1.77384408524244,0,0,0,1.73310971850765,1.66234645358492,0.612508068787107,0,0,0,0.588231488031014,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0.335565212115473,0,2.01656279485478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210324961351382,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0.589257170947335,0,0,1.4387976733305,0.982430281388212,1.44932244350839,2.58127163094416,0,0.539703191637817,0,0,0,0,3.11743205523443,1.7666978725517,3.23939865486365,3.84979432242953,5.09610479413291,0,6.49473123033642,8.10751569520315,6.57181778519218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.958520996047362,0,0.508280908292259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51469581422943,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.26343410291226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279902904647316,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10992976687032,1.25599399253266,1.34307693091263,0,0,0,0,0,0,0,0,3.78077001156113,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|phase1_expression=3.20297694209588,0.348975407639361,0.454999239389536,1.20985684522732,1.00179145989269,0.33575854382378,3.97141489012394,1.03298658753261,1.12630977721333,1.17032263160997,2.05461561870606,0.957265907944037,1.36960583944965,1.22388563386596,0,1.01237633694913,1.39912375625629,1.41957974411207,0.548457734422955,2.12194825899015,0,0.0992909512008853,4.70159620450084,4.15980299262857,5.27641346454491,1.14846392823004,1.29228598847722,0.430942465371778,10.6413114895569,1.26015064879965,1.77384408524244,0,0,0,1.73310971850765,1.66234645358492,0.612508068787107,0,0,0,0.588231488031014,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0.335565212115473,0,2.01656279485478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210324961351382,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0.589257170947335,0,0,1.4387976733305,0.982430281388212,1.44932244350839,2.58127163094416,0,0.539703191637817,0,0,0,0,3.11743205523443,1.7666978725517,3.23939865486365,3.84979432242953,5.09610479413291,0,6.49473123033642,8.10751569520315,6.57181778519218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.958520996047362,0,0.508280908292259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51469581422943,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.26343410291226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279902904647316,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10992976687032,1.25599399253266,1.34307693091263,0,0,0,0,0,0,0,0,3.78077001156113,0,0,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|short_description=p@chr11:52060053..52060061,+
|short_description=p@chr11:52060053..52060061,+
}}
}}

Revision as of 23:59, 13 November 2012

Short description:p@chr11:52060053..52060061, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr11:52060053..52060061, +
Coexpression cluster:MCL_coexpression_mm9:375
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p@chr11:52060053..52060061+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.20
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.21
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.97
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.03
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.05
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.96
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.37
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.22
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.42
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.55
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.12
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.70
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D14.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.28
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B910.64
Ileum epithelium, pool2.CNhs13232.10253-104C11.26
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.73
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D91.44
Mouse Schwann, donor2.CNhs12573.11746-123F90.98
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.24
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G16.49
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G28.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G36.57
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.96
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.26
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.26
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.34
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.78
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell1.48e-1725
endo-epithelial cell5.05e-1415
endodermal cell4.33e-1220
hematopoietic lineage restricted progenitor cell8.50e-1225
T cell3.00e-1111
pro-T cell3.00e-1111
mature alpha-beta T cell1.78e-109
alpha-beta T cell1.78e-109
immature T cell1.78e-109
mature T cell1.78e-109
immature alpha-beta T cell1.78e-109
lymphoid lineage restricted progenitor cell3.35e-1012
connective tissue cell7.60e-1046
mesenchymal cell7.60e-1046
lymphocyte2.58e-0913
common lymphoid progenitor2.58e-0913
motile cell5.72e-0954
leukocyte8.55e-0917
nongranular leukocyte8.55e-0917
CD4-positive, alpha-beta T cell1.10e-088
duct epithelial cell1.30e-083
epithelial cell of tracheobronchial tree1.30e-083
branched duct epithelial cell1.30e-083
epithelial cell of lower respiratory tract1.30e-083
respiratory epithelial cell1.30e-083
tracheal epithelial cell1.30e-083
tracheoblast1.30e-083
hematopoietic cell1.32e-0832
hematopoietic oligopotent progenitor cell1.32e-0832
hematopoietic stem cell1.32e-0832
hematopoietic multipotent progenitor cell1.32e-0832
thymocyte1.76e-086
double negative thymocyte1.76e-086
naive T cell1.76e-086
double-positive, alpha-beta thymocyte1.76e-086
CD4-positive, alpha-beta thymocyte1.76e-086
naive thymus-derived CD4-positive, alpha-beta T cell1.76e-086
DN4 thymocyte1.76e-086
DN1 thymic pro-T cell1.76e-086
DN2 thymocyte1.76e-086
DN3 thymocyte1.76e-086
immature single positive thymocyte1.76e-086
early T lineage precursor1.76e-086
mature CD4 single-positive thymocyte1.76e-086
resting double-positive thymocyte1.76e-086
double-positive blast1.76e-086
CD69-positive double-positive thymocyte1.76e-086
CD69-positive, CD4-positive single-positive thymocyte1.76e-086
CD4-positive, CD8-intermediate double-positive thymocyte1.76e-086
CD24-positive, CD4 single-positive thymocyte1.76e-086

Uber anatomy
Ontology termp-valuen
mucosa1.88e-1315
connective tissue7.60e-1046
intestinal mucosa9.45e-1013
wall of intestine9.45e-1013
gastrointestinal system mucosa9.45e-1013
simple columnar epithelium4.47e-0911
trachea1.30e-083
respiratory airway1.30e-083
tracheobronchial tree1.30e-083
lower respiratory tract1.30e-083
organ component layer1.21e-0724
ileal mucosa1.30e-073
ileum1.30e-073
mucosa of small intestine1.30e-073
wall of small intestine1.30e-073







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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