FFCP PHASE1:Mm9::chr8:33029308..33029349,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr8:33029308..33029349,- | |id=chr8:33029308..33029349,- | ||
|ontology_enrichment_celltype=CL:0000221!3.18e-19!44;CL:0000133!3.18e-19!44;CL:0002319!5.32e-19!43;CL:0000540!1.51e-16!33;CL:0000047!1.51e-16!33;CL:0000031!1.51e-16!33;CL:0000404!1.51e-16!33;CL:0000055!7.74e-15!50;CL:0000117!2.80e-14!23;CL:0000337!2.80e-14!23;CL:0000393!5.86e-13!39;CL:0000211!5.86e-13!39 | |ontology_enrichment_celltype=CL:0000221!3.18e-19!44;CL:0000133!3.18e-19!44;CL:0002319!5.32e-19!43;CL:0000540!1.51e-16!33;CL:0000047!1.51e-16!33;CL:0000031!1.51e-16!33;CL:0000404!1.51e-16!33;CL:0000055!7.74e-15!50;CL:0000117!2.80e-14!23;CL:0000337!2.80e-14!23;CL:0000393!5.86e-13!39;CL:0000211!5.86e-13!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.72e-22,44;CL:0000133,1.72e-22,44;CL:0002319,3.42e-22,43;CL:0000540,8.08e-20,33;CL:0000047,8.08e-20,33;CL:0000031,8.08e-20,33;CL:0000404,8.08e-20,33;CL:0000117,3.84e-18,23;CL:0000337,3.84e-18,23;CL:0000393,6.36e-16,39;CL:0000211,6.36e-16,39;CL:0002321,2.64e-09,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.30e-36!73;UBERON:0005743!2.30e-36!73;UBERON:0000073!6.53e-36!75;UBERON:0001016!6.53e-36!75;UBERON:0004121!4.56e-31!102;UBERON:0000924!4.56e-31!102;UBERON:0006601!4.56e-31!102;UBERON:0002346!1.24e-26!71;UBERON:0003075!1.24e-26!71;UBERON:0007284!1.24e-26!71;UBERON:0001049!2.44e-26!52;UBERON:0005068!2.44e-26!52;UBERON:0006241!2.44e-26!52;UBERON:0007135!2.44e-26!52;UBERON:0000955!1.70e-24!50;UBERON:0006238!1.70e-24!50;UBERON:0002616!5.21e-24!49;UBERON:0000033!1.39e-21!63;UBERON:0002020!5.40e-20!34;UBERON:0003080!1.01e-19!40;UBERON:0002780!5.28e-19!39;UBERON:0001890!5.28e-19!39;UBERON:0006240!5.28e-19!39;UBERON:0003056!2.03e-18!49;UBERON:0002791!2.05e-16!29;UBERON:0003528!2.05e-16!29;UBERON:0001893!2.05e-16!29;UBERON:0000956!1.76e-12!21;UBERON:0001869!1.76e-12!21;UBERON:0000203!1.76e-12!21;UBERON:0007811!3.26e-11!86;UBERON:0002619!9.96e-11!17;UBERON:0000153!1.47e-08!94;UBERON:0003076!3.95e-07!12;UBERON:0003057!3.95e-07!12 | |ontology_enrichment_uberon=UBERON:0001017!2.30e-36!73;UBERON:0005743!2.30e-36!73;UBERON:0000073!6.53e-36!75;UBERON:0001016!6.53e-36!75;UBERON:0004121!4.56e-31!102;UBERON:0000924!4.56e-31!102;UBERON:0006601!4.56e-31!102;UBERON:0002346!1.24e-26!71;UBERON:0003075!1.24e-26!71;UBERON:0007284!1.24e-26!71;UBERON:0001049!2.44e-26!52;UBERON:0005068!2.44e-26!52;UBERON:0006241!2.44e-26!52;UBERON:0007135!2.44e-26!52;UBERON:0000955!1.70e-24!50;UBERON:0006238!1.70e-24!50;UBERON:0002616!5.21e-24!49;UBERON:0000033!1.39e-21!63;UBERON:0002020!5.40e-20!34;UBERON:0003080!1.01e-19!40;UBERON:0002780!5.28e-19!39;UBERON:0001890!5.28e-19!39;UBERON:0006240!5.28e-19!39;UBERON:0003056!2.03e-18!49;UBERON:0002791!2.05e-16!29;UBERON:0003528!2.05e-16!29;UBERON:0001893!2.05e-16!29;UBERON:0000956!1.76e-12!21;UBERON:0001869!1.76e-12!21;UBERON:0000203!1.76e-12!21;UBERON:0007811!3.26e-11!86;UBERON:0002619!9.96e-11!17;UBERON:0000153!1.47e-08!94;UBERON:0003076!3.95e-07!12;UBERON:0003057!3.95e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.12e-44,73;UBERON:0001016,3.52e-42,75;UBERON:0000073,2.35e-34,54;UBERON:0001049,1.95e-32,52;UBERON:0005068,1.95e-32,52;UBERON:0006241,1.95e-32,52;UBERON:0007135,1.95e-32,52;UBERON:0004121,4.24e-32,95;UBERON:0000924,4.24e-32,95;UBERON:0006601,4.24e-32,95;UBERON:0002346,8.25e-30,64;UBERON:0003075,8.25e-30,64;UBERON:0007284,8.25e-30,64;UBERON:0000955,3.60e-27,47;UBERON:0006238,3.60e-27,47;UBERON:0002616,1.50e-26,46;UBERON:0002020,1.32e-25,34;UBERON:0010371,2.56e-25,73;UBERON:0003080,1.81e-23,40;UBERON:0002780,1.52e-22,39;UBERON:0001890,1.52e-22,39;UBERON:0006240,1.52e-22,39;UBERON:0003528,6.27e-21,29;UBERON:0002791,6.27e-21,29;UBERON:0001893,6.27e-21,29;UBERON:0003056,6.26e-19,49;UBERON:0010314,6.25e-18,92;UBERON:0000956,8.55e-16,21;UBERON:0001869,8.55e-16,21;UBERON:0000203,8.55e-16,21;UBERON:0002619,1.64e-13,17;UBERON:0003076,3.17e-09,12;UBERON:0003057,3.17e-09,12;UBERON:0002021,3.73e-08,10;UBERON:0000411,3.73e-08,10;UBERON:0001950,3.73e-08,10;UBERON:0002240,7.55e-07,6;UBERON:0005174,7.55e-07,6;UBERON:0001137,7.55e-07,6;UBERON:0001954,8.26e-07,7;UBERON:0003022,8.26e-07,7;UBERON:0002421,8.26e-07,7;UBERON:0000349,8.26e-07,7;UBERON:0002600,8.26e-07,7 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29616883407888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,0,1.57057123192139,0.588231488031014,2.04913645487534,0.485510353031154,0.125896817975577,0.101376931219515,0,0,20.2763395433815,15.1583466086786,15.748821825017,5.87942970826523,7.18762821824858,0,0,0,0,0,2.06268836910977,8.09265843438391,7.93486468908049,4.43681982454325,1.0165335962074,1.77858959222228,0.899899717281399,0,0.7104801149461,3.59520132622086,2.68952813725088,5.80661828927475,3.64516033495565,5.8890989178387,10.2834354385369,10.8225585066291,9.18680994112155,9.29701068876893,11.0306254393203,15.4162233399144,10.214987046815,13.5173749265494,3.42904348098504,3.01909223887952,5.2091337055676,9.77140496504833,8.4414391504752,8.55670187550137,22.6864010814724,15.0913981647049,10.4383689662168,0.227178579999552,0.529000920747499,0.289864488701678,0,0,0,0,0,0.561777680527007,0,0,0,1.69012103732017,0,0,0,0.216491041011214,0.253359865475099,0,0.22836775943812,0,2.22663208597237,0.173485326766136,0.608930956624282,0.461230994512117,0.301445281105245,1.64624189989987,0.502666365318702,0,0,0,0,0,0,0,5.85561594023094,2.51336048176146,0,0,0,0.127070227073065,11.5338792341713,6.8625090422794,5.02617408451458,6.43149984711423,5.37002460393694,8.3115217823824,4.70499662896497,0.101839363850316,0.497627882440372,0,0.210441855886474,0.130120442962704,1.37941262660084,1.0803727788321,1.50704817835715,0.136072998302656,0.512454881139399,0.749613796477831,0.776110112217047,0,0.189106080167819,0,0.219195732427575,0,0,0,0.995171334092466,0,0,0,0.207125772535502,1.17263029990548,0.36012412292203,0.23674473558521,0,0,0,0,0,0,0,0,0.292399974850665,0.219550115291051,0,2.10289948564127,8.84979666461846,0,0.528901133327089,0,1.85789337488351,0.38660238396628,0.201683524623343,1.11189021922435,0.380451252225118,0,0.658795818896044,0,0.198956472041151,1.16978452271472,0,0.216138049874694,0.199141273254367,0.189667900953082,0.571242563048644,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.184753190166605,0.757965647081939,0.325929952884052,0.169745085775188,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0.275936746304732,17.6605648986571,13.1277088983268,0,0,7.2566890465739,7.41833614163613,7.75524231838076,0.238968797952552,1.33679204449436,1.41538265394416,6.07216052512342,4.67609372658099,2.76701444562566,4.81981974632711,0.283880170416537,0.35613120733451,0.162886959353576,0.494910368917606,0,0,0.302323556964751,0.188605079755898,0,0.307435147943927,0,0.363533729477506,0,0.316036757935816,0,0,5.7874732978144,0.540183282093931,1.03486947026204,0.857348140126369,2.30542303734956,2.67553226403106,4.77192159746151,1.8267896946876,0,0,0.882113592219848,0.49465875882444,0,0.361877549568935,1.55184047204077,0.984845398470368,0.291480836629851,24.8469904694083,0.512612642393558,0,0.185194527369712,0,0,0,0,0.139951452323658,0.138199973804424,0,0.949007980743406,1.01659733563424,0.540026704109006,0.418176592028937,0.218362563746178,0.269728692769641,0.247960367176008,0.523511883968059,0,0,0,1.34564891439581,2.97825282822776,7.77804753376191,8.13706887909706,10.8131920314098,11.5010093872839,3.51551839078665,2.09718688851422,0,0,0,0.202725215290164,0,0,0.358053391334963,0.198681354781265,0,0.147689527174577,0.302899349844443,0.0762068066549998,0.201652370273681,0.0974578807397524,0.192423683280659,0.116876902181569,0,0,0,0,0.386379188064381,0,1.64836461840539,0.643105137237198,0,6.21227026878773,4.60325236507177,8.02053718815155,7.21783365843488,8.90607275701835,9.82012066606611,6.75022500231806,8.55610286126019,6.34399372577886,8.28416498802912,1.764384908931,3.99024873401031,3.07320490357441,1.45864030240976,1.04806581313991,1.65459157605013,2.44471400581777,1.85431551515005,2.88827288632634,1.26348605881899,2.02783439912192,1.69763707247469,1.68554713445788,1.15245274328765,1.43588672389033,1.90517476513229,1.85414921511769,1.54327376370964,0.412085900803307,1.03039244094078,1.71434626192708,1.59728225543404,1.66905332963125,1.0174249164263,1.59985946706062,1.69229215783353,1.46342378298218,1.57841826862706,1.49384525230448,1.68342681497322,1.77952527186261,1.18205378850676,1.22769312950907,1.39443157067369,0.964533054905707,1.99848462350357,2.10538447600868,1.07435527024149,1.72159498861959,0.882365676478062,0.231867835620421 | |phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29616883407888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,0,1.57057123192139,0.588231488031014,2.04913645487534,0.485510353031154,0.125896817975577,0.101376931219515,0,0,20.2763395433815,15.1583466086786,15.748821825017,5.87942970826523,7.18762821824858,0,0,0,0,0,2.06268836910977,8.09265843438391,7.93486468908049,4.43681982454325,1.0165335962074,1.77858959222228,0.899899717281399,0,0.7104801149461,3.59520132622086,2.68952813725088,5.80661828927475,3.64516033495565,5.8890989178387,10.2834354385369,10.8225585066291,9.18680994112155,9.29701068876893,11.0306254393203,15.4162233399144,10.214987046815,13.5173749265494,3.42904348098504,3.01909223887952,5.2091337055676,9.77140496504833,8.4414391504752,8.55670187550137,22.6864010814724,15.0913981647049,10.4383689662168,0.227178579999552,0.529000920747499,0.289864488701678,0,0,0,0,0,0.561777680527007,0,0,0,1.69012103732017,0,0,0,0.216491041011214,0.253359865475099,0,0.22836775943812,0,2.22663208597237,0.173485326766136,0.608930956624282,0.461230994512117,0.301445281105245,1.64624189989987,0.502666365318702,0,0,0,0,0,0,0,5.85561594023094,2.51336048176146,0,0,0,0.127070227073065,11.5338792341713,6.8625090422794,5.02617408451458,6.43149984711423,5.37002460393694,8.3115217823824,4.70499662896497,0.101839363850316,0.497627882440372,0,0.210441855886474,0.130120442962704,1.37941262660084,1.0803727788321,1.50704817835715,0.136072998302656,0.512454881139399,0.749613796477831,0.776110112217047,0,0.189106080167819,0,0.219195732427575,0,0,0,0.995171334092466,0,0,0,0.207125772535502,1.17263029990548,0.36012412292203,0.23674473558521,0,0,0,0,0,0,0,0,0.292399974850665,0.219550115291051,0,2.10289948564127,8.84979666461846,0,0.528901133327089,0,1.85789337488351,0.38660238396628,0.201683524623343,1.11189021922435,0.380451252225118,0,0.658795818896044,0,0.198956472041151,1.16978452271472,0,0.216138049874694,0.199141273254367,0.189667900953082,0.571242563048644,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.184753190166605,0.757965647081939,0.325929952884052,0.169745085775188,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0.275936746304732,17.6605648986571,13.1277088983268,0,0,7.2566890465739,7.41833614163613,7.75524231838076,0.238968797952552,1.33679204449436,1.41538265394416,6.07216052512342,4.67609372658099,2.76701444562566,4.81981974632711,0.283880170416537,0.35613120733451,0.162886959353576,0.494910368917606,0,0,0.302323556964751,0.188605079755898,0,0.307435147943927,0,0.363533729477506,0,0.316036757935816,0,0,5.7874732978144,0.540183282093931,1.03486947026204,0.857348140126369,2.30542303734956,2.67553226403106,4.77192159746151,1.8267896946876,0,0,0.882113592219848,0.49465875882444,0,0.361877549568935,1.55184047204077,0.984845398470368,0.291480836629851,24.8469904694083,0.512612642393558,0,0.185194527369712,0,0,0,0,0.139951452323658,0.138199973804424,0,0.949007980743406,1.01659733563424,0.540026704109006,0.418176592028937,0.218362563746178,0.269728692769641,0.247960367176008,0.523511883968059,0,0,0,1.34564891439581,2.97825282822776,7.77804753376191,8.13706887909706,10.8131920314098,11.5010093872839,3.51551839078665,2.09718688851422,0,0,0,0.202725215290164,0,0,0.358053391334963,0.198681354781265,0,0.147689527174577,0.302899349844443,0.0762068066549998,0.201652370273681,0.0974578807397524,0.192423683280659,0.116876902181569,0,0,0,0,0.386379188064381,0,1.64836461840539,0.643105137237198,0,6.21227026878773,4.60325236507177,8.02053718815155,7.21783365843488,8.90607275701835,9.82012066606611,6.75022500231806,8.55610286126019,6.34399372577886,8.28416498802912,1.764384908931,3.99024873401031,3.07320490357441,1.45864030240976,1.04806581313991,1.65459157605013,2.44471400581777,1.85431551515005,2.88827288632634,1.26348605881899,2.02783439912192,1.69763707247469,1.68554713445788,1.15245274328765,1.43588672389033,1.90517476513229,1.85414921511769,1.54327376370964,0.412085900803307,1.03039244094078,1.71434626192708,1.59728225543404,1.66905332963125,1.0174249164263,1.59985946706062,1.69229215783353,1.46342378298218,1.57841826862706,1.49384525230448,1.68342681497322,1.77952527186261,1.18205378850676,1.22769312950907,1.39443157067369,0.964533054905707,1.99848462350357,2.10538447600868,1.07435527024149,1.72159498861959,0.882365676478062,0.231867835620421 | ||
|short_description=p@chr8:33029308..33029349,- | |short_description=p@chr8:33029308..33029349,- | ||
}} | }} |
Revision as of 20:58, 13 November 2012
Short description: | p@chr8:33029308..33029349, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:33029308..33029349, - |
Coexpression cluster: | MCL_coexpression_mm9:2481 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.72e-22 | 44 |
neurectodermal cell | 1.72e-22 | 44 |
neural cell | 3.42e-22 | 43 |
neuron | 8.08e-20 | 33 |
neuronal stem cell | 8.08e-20 | 33 |
neuroblast | 8.08e-20 | 33 |
electrically signaling cell | 8.08e-20 | 33 |
CNS neuron (sensu Vertebrata) | 3.84e-18 | 23 |
neuroblast (sensu Vertebrata) | 3.84e-18 | 23 |
electrically responsive cell | 6.36e-16 | 39 |
electrically active cell | 6.36e-16 | 39 |
embryonic cell | 2.64e-09 | 70 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.