FFCP PHASE1:Mm9::chr12:28021234..28021238,+: Difference between revisions
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|id=chr12:28021234..28021238,+ | |id=chr12:28021234..28021238,+ | ||
|ontology_enrichment_celltype=CL:0000117!2.13e-09!23;CL:0000337!2.13e-09!23;CL:0002609!2.50e-08!6;CL:0000540!8.28e-08!33;CL:0000047!8.28e-08!33;CL:0000031!8.28e-08!33;CL:0000404!8.28e-08!33 | |ontology_enrichment_celltype=CL:0000117!2.13e-09!23;CL:0000337!2.13e-09!23;CL:0002609!2.50e-08!6;CL:0000540!8.28e-08!33;CL:0000047!8.28e-08!33;CL:0000031!8.28e-08!33;CL:0000404!8.28e-08!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0002609,6.30e-34,6;CL:0000117,1.04e-19,23;CL:0000337,1.04e-19,23;CL:0000540,7.92e-14,33;CL:0000047,7.92e-14,33;CL:0000031,7.92e-14,33;CL:0000404,7.92e-14,33;CL:0000393,9.76e-12,39;CL:0000211,9.76e-12,39;CL:0002319,1.15e-10,43;CL:0000221,2.00e-10,44;CL:0000133,2.00e-10,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!2.44e-09!49;UBERON:0002346!4.55e-08!71;UBERON:0003075!4.55e-08!71;UBERON:0007284!4.55e-08!71;UBERON:0000970!8.93e-08!9;UBERON:0000019!8.93e-08!9;UBERON:0000047!8.93e-08!9;UBERON:0004088!8.93e-08!9;UBERON:0002104!8.93e-08!9;UBERON:0001456!8.93e-08!9;UBERON:0003072!8.93e-08!9;UBERON:0003071!8.93e-08!9;UBERON:0004128!8.93e-08!9;UBERON:0000020!4.16e-07!12;UBERON:0001032!4.16e-07!12;UBERON:0004456!4.16e-07!12;UBERON:0000033!6.66e-07!63 | |ontology_enrichment_uberon=UBERON:0003056!2.44e-09!49;UBERON:0002346!4.55e-08!71;UBERON:0003075!4.55e-08!71;UBERON:0007284!4.55e-08!71;UBERON:0000970!8.93e-08!9;UBERON:0000019!8.93e-08!9;UBERON:0000047!8.93e-08!9;UBERON:0004088!8.93e-08!9;UBERON:0002104!8.93e-08!9;UBERON:0001456!8.93e-08!9;UBERON:0003072!8.93e-08!9;UBERON:0003071!8.93e-08!9;UBERON:0004128!8.93e-08!9;UBERON:0000020!4.16e-07!12;UBERON:0001032!4.16e-07!12;UBERON:0004456!4.16e-07!12;UBERON:0000033!6.66e-07!63 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,4.08e-11,29;UBERON:0002791,4.08e-11,29;UBERON:0001893,4.08e-11,29;UBERON:0000956,4.25e-10,21;UBERON:0001869,4.25e-10,21;UBERON:0000203,4.25e-10,21;UBERON:0002020,1.59e-09,34;UBERON:0002780,2.46e-08,39;UBERON:0001890,2.46e-08,39;UBERON:0006240,2.46e-08,39;UBERON:0003080,3.92e-08,40;UBERON:0002616,4.23e-07,46;UBERON:0000955,5.93e-07,47;UBERON:0006238,5.93e-07,47 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0.159544317990673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,1.05798195854407,0,0,0,0,0,0,0,0,1.14058573539325,4.99521971827255,2.94454945891935,0,0,1.10241719293459,0.383381884072945,0,0,0,0,0.659431438650969,0.365950574409639,1.04182674111352,0,0,0,0.294628585473668,0,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253359865475099,0,0,0,0,0.173485326766136,0,0,0,0,0,0.247194967734374,0,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0.376963056338593,0,0,0,0,0,0,0,0,0.260240885925407,0.689706313300419,0.180062129805349,0.60281927134286,0.136072998302656,0.12811372028485,0.187403449119458,0,0,0,0.175951124163949,0,0.556094498451196,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0.268273401399619,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0.213288250535234,0.696710015581316,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571242563048644,0,0.203651327845314,0.387904974335251,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430846795465598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.900305470156551,0,0,0,0,0.329098041204242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0.108005340821801,0.418176592028937,0,0,0,0,0,0,0,0,0.165458490457098,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343706364687375,0,0,0,0,0,0,1.14166082342594,0,0,0.243106717068294,0,0.183843508450014,0,0,0,0,0,0,0,0.0640251524048693,0,0.476293691283074,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0,0.409231043169689,0,0,0,0.467863216890817,0,0,0,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0.159544317990673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,1.05798195854407,0,0,0,0,0,0,0,0,1.14058573539325,4.99521971827255,2.94454945891935,0,0,1.10241719293459,0.383381884072945,0,0,0,0,0.659431438650969,0.365950574409639,1.04182674111352,0,0,0,0.294628585473668,0,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253359865475099,0,0,0,0,0.173485326766136,0,0,0,0,0,0.247194967734374,0,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0.376963056338593,0,0,0,0,0,0,0,0,0.260240885925407,0.689706313300419,0.180062129805349,0.60281927134286,0.136072998302656,0.12811372028485,0.187403449119458,0,0,0,0.175951124163949,0,0.556094498451196,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0.268273401399619,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0.213288250535234,0.696710015581316,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571242563048644,0,0.203651327845314,0.387904974335251,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430846795465598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.900305470156551,0,0,0,0,0.329098041204242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0.108005340821801,0.418176592028937,0,0,0,0,0,0,0,0,0.165458490457098,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343706364687375,0,0,0,0,0,0,1.14166082342594,0,0,0.243106717068294,0,0.183843508450014,0,0,0,0,0,0,0,0.0640251524048693,0,0.476293691283074,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0,0.409231043169689,0,0,0,0.467863216890817,0,0,0,0 | ||
|short_description=p@chr12:28021234..28021238,+ | |short_description=p@chr12:28021234..28021238,+ | ||
}} | }} |
Revision as of 20:19, 13 November 2012
Short description: | p@chr12:28021234..28021238, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:28021234..28021238, + |
Coexpression cluster: | MCL_coexpression_mm9:924 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 6.30e-34 | 6 |
CNS neuron (sensu Vertebrata) | 1.04e-19 | 23 |
neuroblast (sensu Vertebrata) | 1.04e-19 | 23 |
neuron | 7.92e-14 | 33 |
neuronal stem cell | 7.92e-14 | 33 |
neuroblast | 7.92e-14 | 33 |
electrically signaling cell | 7.92e-14 | 33 |
electrically responsive cell | 9.76e-12 | 39 |
electrically active cell | 9.76e-12 | 39 |
neural cell | 1.15e-10 | 43 |
ectodermal cell | 2.00e-10 | 44 |
neurectodermal cell | 2.00e-10 | 44 |
Ontology term | p-value | n |
---|---|---|
brain grey matter | 4.08e-11 | 29 |
regional part of telencephalon | 4.08e-11 | 29 |
telencephalon | 4.08e-11 | 29 |
cerebral cortex | 4.25e-10 | 21 |
cerebral hemisphere | 4.25e-10 | 21 |
pallium | 4.25e-10 | 21 |
gray matter | 1.59e-09 | 34 |
regional part of forebrain | 2.46e-08 | 39 |
forebrain | 2.46e-08 | 39 |
future forebrain | 2.46e-08 | 39 |
anterior neural tube | 3.92e-08 | 40 |
regional part of brain | 4.23e-07 | 46 |
brain | 5.93e-07 | 47 |
future brain | 5.93e-07 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.