FFCP PHASE1:Mm9::chr7:3249712..3249756,-: Difference between revisions
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|id=chr7:3249712..3249756,- | |id=chr7:3249712..3249756,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.03e-09,3;DOID:4045,1.03e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0002107!9.04e-10!22;UBERON:0007499!9.04e-10!22;UBERON:0006925!9.04e-10!22;UBERON:0009497!9.04e-10!22;UBERON:0000015!9.04e-10!22;UBERON:0002423!9.04e-10!22;UBERON:0006235!9.04e-10!22;UBERON:0008835!9.04e-10!22;UBERON:0003894!9.04e-10!22;UBERON:0004161!9.04e-10!22;UBERON:0008836!9.04e-10!22;UBERON:0009854!4.53e-09!23;UBERON:0009856!4.53e-09!23;UBERON:0002365!7.45e-08!25;UBERON:0002330!7.45e-08!25;UBERON:0009569!7.56e-07!66 | |ontology_enrichment_uberon=UBERON:0002107!9.04e-10!22;UBERON:0007499!9.04e-10!22;UBERON:0006925!9.04e-10!22;UBERON:0009497!9.04e-10!22;UBERON:0000015!9.04e-10!22;UBERON:0002423!9.04e-10!22;UBERON:0006235!9.04e-10!22;UBERON:0008835!9.04e-10!22;UBERON:0003894!9.04e-10!22;UBERON:0004161!9.04e-10!22;UBERON:0008836!9.04e-10!22;UBERON:0009854!4.53e-09!23;UBERON:0009856!4.53e-09!23;UBERON:0002365!7.45e-08!25;UBERON:0002330!7.45e-08!25;UBERON:0009569!7.56e-07!66 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.88e-18,22;UBERON:0007499,1.88e-18,22;UBERON:0006925,1.88e-18,22;UBERON:0009497,1.88e-18,22;UBERON:0000015,1.88e-18,22;UBERON:0002423,1.88e-18,22;UBERON:0006235,1.88e-18,22;UBERON:0008835,1.88e-18,22;UBERON:0003894,1.88e-18,22;UBERON:0004161,1.88e-18,22;UBERON:0008836,1.88e-18,22;UBERON:0009854,1.59e-17,23;UBERON:0009856,1.59e-17,23;UBERON:0002365,6.75e-16,25;UBERON:0002330,6.75e-16,25;UBERON:0005256,3.51e-14,45;UBERON:0003104,8.82e-14,61;UBERON:0009142,8.82e-14,61;UBERON:0005172,3.46e-12,49;UBERON:0005173,3.46e-12,49;UBERON:0002417,3.46e-12,49;UBERON:0000916,3.46e-12,49;UBERON:0009569,3.34e-09,66;UBERON:0002100,9.20e-09,90;UBERON:0003914,1.92e-08,47;UBERON:0000490,2.40e-07,66;UBERON:0005177,4.68e-07,79 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.607425802169478,0,0.630924330716475,0.685572168028694,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,59.8500231953778,32.0347491254758,43.9759944937991,122.940380998482,92.8941859543486,67.0004287182992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,3.2382191498269,0.649776417447669,4.92829575807069,1.68533304158102,0,0,0,0,0,0,0,0,0,0,1.1418387971906,0.258937883647172,0,0.173485326766136,0,0,0.150722640552623,0.352766121407114,0.125666591329675,1.97755974187499,0,7.96149496754887,0.647067399789637,1.76673214768315,1.93950101254089,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,2.98576729464223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0.51469581422943,0,0,0,0,0,0,0,0,0.268273401399619,0,0.16455984991348,0.164167464079095,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0.190225626112559,1.42358718463353,0,0,0,0.38992817423824,0,0.648414149624083,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0.405720242777006,1.20588579876208,1.52775511068852,9.20627639842594,8.10676133875177,6.04035109013779,12.9391385874619,8.55924179637558,7.17686648163489,3.53610429125956,6.45830688678884,4.82443521363367,0.739012760666419,0,0,0,0,0,0.238043640886014,0.390267295715598,0.472905432318573,0.221464689648775,0,0.491589944147214,1.20879487306127,0.289298117163023,0,0,0,0,0.160550589987792,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0.307435147943927,0,0.727067458955011,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0.874442509889552,0,1.19609616558497,0.82554747185289,7.03739204004904,1.31857919903284,0.546776910884101,0,0,0.139951452323658,0,0,0,0,0.108005340821801,0.209088296014469,0,0,0.661227645802687,0,0,0,0,0,0.165458490457098,0,0.129159823477731,0.168956125490778,0.117357238645754,0.13020438484395,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0.549454872801795,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.44449345560323,0.824140228955577,0.64183841918363,0.252697211763798,0.760437899670719,0,0.187283014939765,0.448176066834085,0.459483751644906,1.42888107384922,0.463537303779422,0.578727661391115,0.412085900803307,0.588795680537589,0.685738504770831,0.354951612318675,0.238436189947321,0.436039249896986,0.470546902076653,0.423073039458382,0.914639864363863,0.526139422875686,0.271608227691724,0.561142271657738,0.474540072496697,0.394017929502254,0,0.309873682371932,0.192906610981141,0,1.40358965067245,0.644613162144895,0.191288332068843,0.661774257358546,1.39120701372253 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.607425802169478,0,0.630924330716475,0.685572168028694,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,59.8500231953778,32.0347491254758,43.9759944937991,122.940380998482,92.8941859543486,67.0004287182992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,3.2382191498269,0.649776417447669,4.92829575807069,1.68533304158102,0,0,0,0,0,0,0,0,0,0,1.1418387971906,0.258937883647172,0,0.173485326766136,0,0,0.150722640552623,0.352766121407114,0.125666591329675,1.97755974187499,0,7.96149496754887,0.647067399789637,1.76673214768315,1.93950101254089,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,2.98576729464223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0.51469581422943,0,0,0,0,0,0,0,0,0.268273401399619,0,0.16455984991348,0.164167464079095,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0.190225626112559,1.42358718463353,0,0,0,0.38992817423824,0,0.648414149624083,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0.405720242777006,1.20588579876208,1.52775511068852,9.20627639842594,8.10676133875177,6.04035109013779,12.9391385874619,8.55924179637558,7.17686648163489,3.53610429125956,6.45830688678884,4.82443521363367,0.739012760666419,0,0,0,0,0,0.238043640886014,0.390267295715598,0.472905432318573,0.221464689648775,0,0.491589944147214,1.20879487306127,0.289298117163023,0,0,0,0,0.160550589987792,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0.307435147943927,0,0.727067458955011,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0.874442509889552,0,1.19609616558497,0.82554747185289,7.03739204004904,1.31857919903284,0.546776910884101,0,0,0.139951452323658,0,0,0,0,0.108005340821801,0.209088296014469,0,0,0.661227645802687,0,0,0,0,0,0.165458490457098,0,0.129159823477731,0.168956125490778,0.117357238645754,0.13020438484395,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0.549454872801795,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.44449345560323,0.824140228955577,0.64183841918363,0.252697211763798,0.760437899670719,0,0.187283014939765,0.448176066834085,0.459483751644906,1.42888107384922,0.463537303779422,0.578727661391115,0.412085900803307,0.588795680537589,0.685738504770831,0.354951612318675,0.238436189947321,0.436039249896986,0.470546902076653,0.423073039458382,0.914639864363863,0.526139422875686,0.271608227691724,0.561142271657738,0.474540072496697,0.394017929502254,0,0.309873682371932,0.192906610981141,0,1.40358965067245,0.644613162144895,0.191288332068843,0.661774257358546,1.39120701372253 | ||
|short_description=p1@Nlrp12 | |short_description=p1@Nlrp12 | ||
}} | }} |
Revision as of 19:58, 13 November 2012
Short description: | p1@Nlrp12 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nlrp12_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 0bp_to_ENSMUST00000108653, NM_001033431, uc009eul.2, uc009euo.1_5end |
EntrezGene: | Nlrp12 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
liver | 1.88e-18 | 22 |
epithelial sac | 1.88e-18 | 22 |
digestive gland | 1.88e-18 | 22 |
epithelium of foregut-midgut junction | 1.88e-18 | 22 |
anatomical boundary | 1.88e-18 | 22 |
hepatobiliary system | 1.88e-18 | 22 |
foregut-midgut junction | 1.88e-18 | 22 |
hepatic diverticulum | 1.88e-18 | 22 |
liver primordium | 1.88e-18 | 22 |
septum transversum | 1.88e-18 | 22 |
liver bud | 1.88e-18 | 22 |
digestive tract diverticulum | 1.59e-17 | 23 |
sac | 1.59e-17 | 23 |
exocrine gland | 6.75e-16 | 25 |
exocrine system | 6.75e-16 | 25 |
trunk mesenchyme | 3.51e-14 | 45 |
mesenchyme | 8.82e-14 | 61 |
entire embryonic mesenchyme | 8.82e-14 | 61 |
abdomen element | 3.46e-12 | 49 |
abdominal segment element | 3.46e-12 | 49 |
abdominal segment of trunk | 3.46e-12 | 49 |
abdomen | 3.46e-12 | 49 |
subdivision of trunk | 3.34e-09 | 66 |
trunk | 9.20e-09 | 90 |
epithelial tube | 1.92e-08 | 47 |
unilaminar epithelium | 2.40e-07 | 66 |
trunk region element | 4.68e-07 | 79 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.03e-09 | 3 |
muscle cancer | 1.03e-09 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.