FFCP PHASE1:Mm9::chr5:9266097..9266202,+: Difference between revisions
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|id=chr5:9266097..9266202,+ | |id=chr5:9266097..9266202,+ | ||
|ontology_enrichment_celltype=CL:0000540!1.67e-12!33;CL:0000047!1.67e-12!33;CL:0000031!1.67e-12!33;CL:0000404!1.67e-12!33;CL:0000393!8.20e-10!39;CL:0000211!8.20e-10!39;CL:0002319!3.81e-09!43;CL:0000117!5.45e-09!23;CL:0000337!5.45e-09!23;CL:0000221!5.93e-09!44;CL:0000133!5.93e-09!44;CL:0000055!3.95e-07!50 | |ontology_enrichment_celltype=CL:0000540!1.67e-12!33;CL:0000047!1.67e-12!33;CL:0000031!1.67e-12!33;CL:0000404!1.67e-12!33;CL:0000393!8.20e-10!39;CL:0000211!8.20e-10!39;CL:0002319!3.81e-09!43;CL:0000117!5.45e-09!23;CL:0000337!5.45e-09!23;CL:0000221!5.93e-09!44;CL:0000133!5.93e-09!44;CL:0000055!3.95e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,6.46e-13,33;CL:0000047,6.46e-13,33;CL:0000031,6.46e-13,33;CL:0000404,6.46e-13,33;CL:0000393,2.27e-10,39;CL:0000211,2.27e-10,39;CL:0002319,1.45e-09,43;CL:0000221,2.31e-09,44;CL:0000133,2.31e-09,44;CL:0000117,2.85e-09,23;CL:0000337,2.85e-09,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.02e-26!73;UBERON:0005743!2.02e-26!73;UBERON:0002346!2.64e-26!71;UBERON:0003075!2.64e-26!71;UBERON:0007284!2.64e-26!71;UBERON:0000073!5.89e-26!75;UBERON:0001016!5.89e-26!75;UBERON:0004121!3.47e-25!102;UBERON:0000924!3.47e-25!102;UBERON:0006601!3.47e-25!102;UBERON:0001049!3.75e-20!52;UBERON:0005068!3.75e-20!52;UBERON:0006241!3.75e-20!52;UBERON:0007135!3.75e-20!52;UBERON:0000033!3.37e-19!63;UBERON:0000955!4.40e-19!50;UBERON:0006238!4.40e-19!50;UBERON:0002616!1.14e-18!49;UBERON:0003056!2.76e-17!49;UBERON:0003080!2.74e-15!40;UBERON:0002780!1.27e-14!39;UBERON:0001890!1.27e-14!39;UBERON:0006240!1.27e-14!39;UBERON:0002020!2.11e-13!34;UBERON:0002791!6.97e-11!29;UBERON:0003528!6.97e-11!29;UBERON:0001893!6.97e-11!29;UBERON:0002021!2.87e-07!10;UBERON:0000411!2.87e-07!10;UBERON:0001950!2.87e-07!10;UBERON:0000956!3.87e-07!21;UBERON:0001869!3.87e-07!21;UBERON:0000203!3.87e-07!21;UBERON:0002619!3.98e-07!17;UBERON:0000468!4.36e-07!333 | |ontology_enrichment_uberon=UBERON:0001017!2.02e-26!73;UBERON:0005743!2.02e-26!73;UBERON:0002346!2.64e-26!71;UBERON:0003075!2.64e-26!71;UBERON:0007284!2.64e-26!71;UBERON:0000073!5.89e-26!75;UBERON:0001016!5.89e-26!75;UBERON:0004121!3.47e-25!102;UBERON:0000924!3.47e-25!102;UBERON:0006601!3.47e-25!102;UBERON:0001049!3.75e-20!52;UBERON:0005068!3.75e-20!52;UBERON:0006241!3.75e-20!52;UBERON:0007135!3.75e-20!52;UBERON:0000033!3.37e-19!63;UBERON:0000955!4.40e-19!50;UBERON:0006238!4.40e-19!50;UBERON:0002616!1.14e-18!49;UBERON:0003056!2.76e-17!49;UBERON:0003080!2.74e-15!40;UBERON:0002780!1.27e-14!39;UBERON:0001890!1.27e-14!39;UBERON:0006240!1.27e-14!39;UBERON:0002020!2.11e-13!34;UBERON:0002791!6.97e-11!29;UBERON:0003528!6.97e-11!29;UBERON:0001893!6.97e-11!29;UBERON:0002021!2.87e-07!10;UBERON:0000411!2.87e-07!10;UBERON:0001950!2.87e-07!10;UBERON:0000956!3.87e-07!21;UBERON:0001869!3.87e-07!21;UBERON:0000203!3.87e-07!21;UBERON:0002619!3.98e-07!17;UBERON:0000468!4.36e-07!333 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.48e-27,73;UBERON:0001016,4.53e-27,75;UBERON:0002346,5.41e-25,64;UBERON:0003075,5.41e-25,64;UBERON:0007284,5.41e-25,64;UBERON:0004121,8.28e-24,95;UBERON:0000924,8.28e-24,95;UBERON:0006601,8.28e-24,95;UBERON:0000073,2.20e-22,54;UBERON:0001049,4.77e-21,52;UBERON:0005068,4.77e-21,52;UBERON:0006241,4.77e-21,52;UBERON:0007135,4.77e-21,52;UBERON:0010371,4.97e-21,73;UBERON:0010314,3.22e-18,92;UBERON:0000955,6.68e-18,47;UBERON:0006238,6.68e-18,47;UBERON:0003056,7.02e-18,49;UBERON:0002616,1.76e-17,46;UBERON:0003080,8.28e-16,40;UBERON:0002780,4.09e-15,39;UBERON:0001890,4.09e-15,39;UBERON:0006240,4.09e-15,39;UBERON:0002020,7.55e-14,34;UBERON:0003528,3.10e-11,29;UBERON:0002791,3.10e-11,29;UBERON:0001893,3.10e-11,29;UBERON:0002021,1.74e-07,10;UBERON:0000411,1.74e-07,10;UBERON:0001950,1.74e-07,10;UBERON:0000956,2.38e-07,21;UBERON:0001869,2.38e-07,21;UBERON:0000203,2.38e-07,21;UBERON:0002619,2.44e-07,17 | |||
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| ||
|short_description=p1@9330182L06Rik | |short_description=p1@9330182L06Rik | ||
}} | }} |
Revision as of 19:21, 13 November 2012
Short description: | p1@9330182L06Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_9330182L06Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:278 |
Association with transcript: | 0bp_to_ENSMUST00000069538, ENSMUST00000115348, ENSMUST00000131626, ENSMUST00000134991, ENSMUST00000152095, ENSMUST00000154662, ENSMUST00000155764, ENSMUST00000166011, NM_172706, uc008wlh.1, uc008wli.1, uc008wlj.1, uc008wlk.1, uc012dsc.1, uc012dsd.1, uc012dse.1_5end |
EntrezGene: | 9330182L06Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 6.46e-13 | 33 |
neuronal stem cell | 6.46e-13 | 33 |
neuroblast | 6.46e-13 | 33 |
electrically signaling cell | 6.46e-13 | 33 |
electrically responsive cell | 2.27e-10 | 39 |
electrically active cell | 2.27e-10 | 39 |
neural cell | 1.45e-09 | 43 |
ectodermal cell | 2.31e-09 | 44 |
neurectodermal cell | 2.31e-09 | 44 |
CNS neuron (sensu Vertebrata) | 2.85e-09 | 23 |
neuroblast (sensu Vertebrata) | 2.85e-09 | 23 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.48e-27 | 73 |
nervous system | 4.53e-27 | 75 |
neurectoderm | 5.41e-25 | 64 |
neural plate | 5.41e-25 | 64 |
presumptive neural plate | 5.41e-25 | 64 |
ectoderm-derived structure | 8.28e-24 | 95 |
ectoderm | 8.28e-24 | 95 |
presumptive ectoderm | 8.28e-24 | 95 |
regional part of nervous system | 2.20e-22 | 54 |
neural tube | 4.77e-21 | 52 |
neural rod | 4.77e-21 | 52 |
future spinal cord | 4.77e-21 | 52 |
neural keel | 4.77e-21 | 52 |
ecto-epithelium | 4.97e-21 | 73 |
structure with developmental contribution from neural crest | 3.22e-18 | 92 |
brain | 6.68e-18 | 47 |
future brain | 6.68e-18 | 47 |
pre-chordal neural plate | 7.02e-18 | 49 |
regional part of brain | 1.76e-17 | 46 |
anterior neural tube | 8.28e-16 | 40 |
regional part of forebrain | 4.09e-15 | 39 |
forebrain | 4.09e-15 | 39 |
future forebrain | 4.09e-15 | 39 |
gray matter | 7.55e-14 | 34 |
brain grey matter | 3.10e-11 | 29 |
regional part of telencephalon | 3.10e-11 | 29 |
telencephalon | 3.10e-11 | 29 |
occipital lobe | 1.74e-07 | 10 |
visual cortex | 1.74e-07 | 10 |
neocortex | 1.74e-07 | 10 |
cerebral cortex | 2.38e-07 | 21 |
cerebral hemisphere | 2.38e-07 | 21 |
pallium | 2.38e-07 | 21 |
regional part of cerebral cortex | 2.44e-07 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.