FFCP PHASE1:Mm9::chr8:49432892..49432894,+: Difference between revisions
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|id=chr8:49432892..49432894,+ | |id=chr8:49432892..49432894,+ | ||
|ontology_enrichment_celltype=CL:0000548!8.82e-19!115;CL:0000004!8.82e-19!115;CL:0000255!8.82e-19!115;CL:0002371!9.03e-18!118;CL:0000144!1.60e-17!121;CL:0000012!1.60e-17!121;CL:0000063!3.09e-16!66;CL:0000219!5.58e-13!54;CL:0002320!2.31e-12!46;CL:0000134!2.31e-12!46;CL:0000034!2.96e-12!97;CL:0002031!7.76e-12!25;CL:0000988!4.17e-11!32;CL:0002032!4.17e-11!32;CL:0000037!4.17e-11!32;CL:0000566!4.17e-11!32;CL:0000837!4.17e-11!32;CL:0000723!9.03e-11!91;CL:0000048!9.03e-11!91;CL:0000838!2.17e-07!12;CL:0000738!5.37e-07!17;CL:0002087!5.37e-07!17;CL:0000553!7.22e-07!6;CL:0000556!7.22e-07!6 | |ontology_enrichment_celltype=CL:0000548!8.82e-19!115;CL:0000004!8.82e-19!115;CL:0000255!8.82e-19!115;CL:0002371!9.03e-18!118;CL:0000144!1.60e-17!121;CL:0000012!1.60e-17!121;CL:0000063!3.09e-16!66;CL:0000219!5.58e-13!54;CL:0002320!2.31e-12!46;CL:0000134!2.31e-12!46;CL:0000034!2.96e-12!97;CL:0002031!7.76e-12!25;CL:0000988!4.17e-11!32;CL:0002032!4.17e-11!32;CL:0000037!4.17e-11!32;CL:0000566!4.17e-11!32;CL:0000837!4.17e-11!32;CL:0000723!9.03e-11!91;CL:0000048!9.03e-11!91;CL:0000838!2.17e-07!12;CL:0000738!5.37e-07!17;CL:0002087!5.37e-07!17;CL:0000553!7.22e-07!6;CL:0000556!7.22e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002476,8.16e-14,2;CL:0002031,3.94e-12,25;CL:0000219,1.10e-10,54;CL:0002320,2.76e-10,46;CL:0000134,2.76e-10,46;CL:0002293,1.79e-09,3;CL:0000738,2.20e-09,17;CL:0002087,2.20e-09,17;CL:0000988,2.37e-09,32;CL:0002032,2.37e-09,32;CL:0000037,2.37e-09,32;CL:0000837,2.37e-09,32;CL:0000839,2.80e-08,13;CL:0000815,2.05e-07,1;CL:0000792,2.05e-07,1;CL:0002194,2.39e-07,4;CL:0000766,2.39e-07,4;CL:0000234,2.39e-07,4;CL:0000576,2.39e-07,4;CL:0000235,2.39e-07,4;CL:0000864,2.39e-07,4;CL:0002009,2.39e-07,4;CL:0000040,2.39e-07,4;CL:0000559,2.39e-07,4;CL:0000213,3.16e-07,1;CL:0002078,3.16e-07,1;CL:0000115,3.16e-07,1;CL:0002262,3.16e-07,1;CL:1000398,3.16e-07,1;CL:0000763,9.34e-07,16 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!2.31e-12!46 | |ontology_enrichment_uberon=UBERON:0002384!2.31e-12!46 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.76e-10,46;UBERON:0002193,7.28e-08,48;UBERON:0002405,7.28e-08,48;UBERON:0002394,3.16e-07,1;UBERON:0001281,3.16e-07,1;UBERON:0000353,3.16e-07,1;UBERON:0003497,3.16e-07,1;UBERON:0003909,3.16e-07,1;UBERON:0003928,3.16e-07,1;UBERON:0003835,3.16e-07,1;UBERON:0003513,3.16e-07,1;UBERON:0001280,3.16e-07,1;UBERON:0004647,3.16e-07,1;UBERON:0002294,3.16e-07,1;UBERON:0001173,3.16e-07,1;UBERON:0004912,3.16e-07,1;UBERON:0005171,3.16e-07,1;UBERON:0002371,9.34e-07,16 | |||
|phase1_expression=0,0.348975407639361,0,0,0,0.16787927191189,1.16806320297763,1.29123323441576,0.422366166455,0.70219357896598,0.34243593645101,0.159544317990673,2.05440875917447,0.874204024189974,0.333109761815663,0.607425802169478,0.699561878128147,2.05050407482854,0.959801035240171,2.12194825899015,0,0,1.56719873483361,1.43993180514066,0.22940928106717,0,0.86152399231815,0.215471232685889,0.950117097281869,0,0.665191531965914,0,0.61506478758457,0,0.288851619751275,0.332469290716985,0,0,0,0,0,0,0,0,0.101376931219515,0,0.782391344348039,0,0.659058548203415,0,0,1.43752564364972,0.503347818173209,0,0.672187598284928,0,0,0.515672092277442,0,0,0,0.338844532069132,0.889294796111139,0.449949858640699,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0,0.122490799214954,0.0958454710182364,0,0,0,0.153606533256243,0.263772575460388,0,0,0,0.56276261003168,0,0,0,0.186399445825301,0,0.0755715601067855,1.15945795480671,0,0,0,0,0.448026887097336,0.140444420131752,0,0.779358013808606,1.41335829804136,0,1.28326477414318,0,7.11066703153331,0.216491041011214,0.506719730950197,0.505524445014783,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0.889491589511453,0,0,0.125654352112864,0,0,0.20778804455956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0.772043721344145,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0.257734922644187,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0.202860121388503,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0.325929952884052,0,0,0,0,0.195133647857799,0,0,0,0.163863314715738,0,0,1.50791283939272,1.63171705145613,0.491764273019036,0.275936746304732,0,0,0,0,0.631016438832513,0,0,0.238968797952552,0.222798674082394,0.283076530788832,0,0.292255857911312,0.395287777946524,0.321321316421807,0,0,0,0.164970122972535,0,0,0,0,0,0.307435147943927,0,0,0,0.316036757935816,0,0,0,0.18006109403131,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0.621339313086926,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0.120195449519969,0,0,0,0,0,0,0.116876902181569,0.226730383615211,0.887943813496259,0.538283139656854,0.503653849092235,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0,0.183843508450014,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0.147198920134397,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0.220591419119515,0 | |phase1_expression=0,0.348975407639361,0,0,0,0.16787927191189,1.16806320297763,1.29123323441576,0.422366166455,0.70219357896598,0.34243593645101,0.159544317990673,2.05440875917447,0.874204024189974,0.333109761815663,0.607425802169478,0.699561878128147,2.05050407482854,0.959801035240171,2.12194825899015,0,0,1.56719873483361,1.43993180514066,0.22940928106717,0,0.86152399231815,0.215471232685889,0.950117097281869,0,0.665191531965914,0,0.61506478758457,0,0.288851619751275,0.332469290716985,0,0,0,0,0,0,0,0,0.101376931219515,0,0.782391344348039,0,0.659058548203415,0,0,1.43752564364972,0.503347818173209,0,0.672187598284928,0,0,0.515672092277442,0,0,0,0.338844532069132,0.889294796111139,0.449949858640699,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0,0.122490799214954,0.0958454710182364,0,0,0,0.153606533256243,0.263772575460388,0,0,0,0.56276261003168,0,0,0,0.186399445825301,0,0.0755715601067855,1.15945795480671,0,0,0,0,0.448026887097336,0.140444420131752,0,0.779358013808606,1.41335829804136,0,1.28326477414318,0,7.11066703153331,0.216491041011214,0.506719730950197,0.505524445014783,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0.889491589511453,0,0,0.125654352112864,0,0,0.20778804455956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0.772043721344145,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0.257734922644187,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0.202860121388503,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0.325929952884052,0,0,0,0,0.195133647857799,0,0,0,0.163863314715738,0,0,1.50791283939272,1.63171705145613,0.491764273019036,0.275936746304732,0,0,0,0,0.631016438832513,0,0,0.238968797952552,0.222798674082394,0.283076530788832,0,0.292255857911312,0.395287777946524,0.321321316421807,0,0,0,0.164970122972535,0,0,0,0,0,0.307435147943927,0,0,0,0.316036757935816,0,0,0,0.18006109403131,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0.621339313086926,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0.120195449519969,0,0,0,0,0,0,0.116876902181569,0.226730383615211,0.887943813496259,0.538283139656854,0.503653849092235,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0,0.183843508450014,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0.147198920134397,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0.220591419119515,0 | ||
|short_description=p@chr8:49432892..49432894,+ | |short_description=p@chr8:49432892..49432894,+ | ||
}} | }} |
Revision as of 19:07, 13 November 2012
Short description: | p@chr8:49432892..49432894, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:49432892..49432894, + |
Coexpression cluster: | MCL_coexpression_mm9:504 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow macrophage | 8.16e-14 | 2 |
hematopoietic lineage restricted progenitor cell | 3.94e-12 | 25 |
motile cell | 1.10e-10 | 54 |
connective tissue cell | 2.76e-10 | 46 |
mesenchymal cell | 2.76e-10 | 46 |
epithelial cell of thymus | 1.79e-09 | 3 |
leukocyte | 2.20e-09 | 17 |
nongranular leukocyte | 2.20e-09 | 17 |
hematopoietic cell | 2.37e-09 | 32 |
hematopoietic oligopotent progenitor cell | 2.37e-09 | 32 |
hematopoietic stem cell | 2.37e-09 | 32 |
hematopoietic multipotent progenitor cell | 2.37e-09 | 32 |
myeloid lineage restricted progenitor cell | 2.80e-08 | 13 |
regulatory T cell | 2.05e-07 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.05e-07 | 1 |
monopoietic cell | 2.39e-07 | 4 |
myeloid leukocyte | 2.39e-07 | 4 |
phagocyte | 2.39e-07 | 4 |
monocyte | 2.39e-07 | 4 |
macrophage | 2.39e-07 | 4 |
tissue-resident macrophage | 2.39e-07 | 4 |
macrophage dendritic cell progenitor | 2.39e-07 | 4 |
monoblast | 2.39e-07 | 4 |
promonocyte | 2.39e-07 | 4 |
lining cell | 3.16e-07 | 1 |
meso-epithelial cell | 3.16e-07 | 1 |
endothelial cell | 3.16e-07 | 1 |
endothelial cell of sinusoid | 3.16e-07 | 1 |
endothelial cell of hepatic sinusoid | 3.16e-07 | 1 |
myeloid cell | 9.34e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.76e-10 | 46 |
hemolymphoid system | 7.28e-08 | 48 |
immune system | 7.28e-08 | 48 |
bile duct | 3.16e-07 | 1 |
hepatic sinusoid | 3.16e-07 | 1 |
parenchyma | 3.16e-07 | 1 |
abdomen blood vessel | 3.16e-07 | 1 |
sinusoid | 3.16e-07 | 1 |
digestive system duct | 3.16e-07 | 1 |
abdominal segment blood vessel | 3.16e-07 | 1 |
trunk blood vessel | 3.16e-07 | 1 |
liver parenchyma | 3.16e-07 | 1 |
liver lobule | 3.16e-07 | 1 |
biliary system | 3.16e-07 | 1 |
biliary tree | 3.16e-07 | 1 |
biliary bud | 3.16e-07 | 1 |
hepatic duct | 3.16e-07 | 1 |
bone marrow | 9.34e-07 | 16 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.