FFCP PHASE1:Mm9::chr3:34548946..34548972,+: Difference between revisions
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|id=chr3:34548946..34548972,+ | |id=chr3:34548946..34548972,+ | ||
|ontology_enrichment_celltype=CL:0000221!1.74e-27!44;CL:0000133!1.74e-27!44;CL:0002319!1.33e-26!43;CL:0000055!1.59e-22!50;CL:0000540!8.86e-20!33;CL:0000047!8.86e-20!33;CL:0000031!8.86e-20!33;CL:0000404!8.86e-20!33;CL:0000393!7.46e-17!39;CL:0000211!7.46e-17!39;CL:0000117!1.33e-13!23;CL:0000337!1.33e-13!23;CL:0002321!5.12e-13!70;CL:0000220!5.12e-13!70;CL:0000333!1.45e-07!10;CL:0000095!1.45e-07!10;CL:0000243!1.45e-07!10;CL:0000123!1.45e-07!10;CL:0000125!1.45e-07!10;CL:0000030!1.45e-07!10;CL:0000339!1.45e-07!10;CL:0000107!8.66e-07!9 | |ontology_enrichment_celltype=CL:0000221!1.74e-27!44;CL:0000133!1.74e-27!44;CL:0002319!1.33e-26!43;CL:0000055!1.59e-22!50;CL:0000540!8.86e-20!33;CL:0000047!8.86e-20!33;CL:0000031!8.86e-20!33;CL:0000404!8.86e-20!33;CL:0000393!7.46e-17!39;CL:0000211!7.46e-17!39;CL:0000117!1.33e-13!23;CL:0000337!1.33e-13!23;CL:0002321!5.12e-13!70;CL:0000220!5.12e-13!70;CL:0000333!1.45e-07!10;CL:0000095!1.45e-07!10;CL:0000243!1.45e-07!10;CL:0000123!1.45e-07!10;CL:0000125!1.45e-07!10;CL:0000030!1.45e-07!10;CL:0000339!1.45e-07!10;CL:0000107!8.66e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,4.50e-30,44;CL:0000133,4.50e-30,44;CL:0002319,4.46e-29,43;CL:0000540,3.15e-22,33;CL:0000047,3.15e-22,33;CL:0000031,3.15e-22,33;CL:0000404,3.15e-22,33;CL:0000393,3.31e-17,39;CL:0000211,3.31e-17,39;CL:0000117,3.23e-15,23;CL:0000337,3.23e-15,23;CL:0002321,1.39e-14,70;CL:0000333,1.64e-07,10;CL:0000095,1.64e-07,10;CL:0000243,1.64e-07,10;CL:0000123,1.64e-07,10;CL:0000125,1.64e-07,10;CL:0000030,1.64e-07,10;CL:0000339,1.64e-07,10;CL:0000107,1.71e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.61e-47,75;UBERON:0001017,2.52e-45,73;UBERON:0004121,7.56e-45,95;UBERON:0000924,7.56e-45,95;UBERON:0006601,7.56e-45,95;UBERON:0002346,3.53e-34,64;UBERON:0003075,3.53e-34,64;UBERON:0007284,3.53e-34,64;UBERON:0010371,8.92e-30,73;UBERON:0000073,1.01e-29,54;UBERON:0001049,3.39e-29,52;UBERON:0005068,3.39e-29,52;UBERON:0006241,3.39e-29,52;UBERON:0007135,3.39e-29,52;UBERON:0000955,9.42e-25,47;UBERON:0006238,9.42e-25,47;UBERON:0003056,1.06e-24,49;UBERON:0002616,3.19e-24,46;UBERON:0003080,2.48e-22,40;UBERON:0002780,1.08e-21,39;UBERON:0001890,1.08e-21,39;UBERON:0006240,1.08e-21,39;UBERON:0002020,1.08e-20,34;UBERON:0010314,4.82e-19,92;UBERON:0003528,9.31e-17,29;UBERON:0002791,9.31e-17,29;UBERON:0001893,9.31e-17,29;UBERON:0011216,4.81e-12,194;UBERON:0000956,7.20e-12,21;UBERON:0001869,7.20e-12,21;UBERON:0000203,7.20e-12,21;UBERON:0002619,4.48e-10,17;UBERON:0000010,3.14e-09,11;UBERON:0002410,1.71e-07,9;UBERON:0004111,2.33e-07,122;UBERON:0003076,2.83e-07,12;UBERON:0003057,2.83e-07,12;UBERON:0000025,4.51e-07,114 | |||
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| ||
|short_description=p2@Sox2 | |short_description=p2@Sox2 | ||
}} | }} |
Revision as of 18:23, 13 November 2012
Short description: | p2@Sox2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Sox2_5end |
Coexpression cluster: | MCL_coexpression_mm9:3407 |
Association with transcript: | -4bp_to_ENSMUST00000169607_5end |
EntrezGene: | Sox2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 4.50e-30 | 44 |
neurectodermal cell | 4.50e-30 | 44 |
neural cell | 4.46e-29 | 43 |
neuron | 3.15e-22 | 33 |
neuronal stem cell | 3.15e-22 | 33 |
neuroblast | 3.15e-22 | 33 |
electrically signaling cell | 3.15e-22 | 33 |
electrically responsive cell | 3.31e-17 | 39 |
electrically active cell | 3.31e-17 | 39 |
CNS neuron (sensu Vertebrata) | 3.23e-15 | 23 |
neuroblast (sensu Vertebrata) | 3.23e-15 | 23 |
embryonic cell | 1.39e-14 | 70 |
migratory neural crest cell | 1.64e-07 | 10 |
neuron associated cell | 1.64e-07 | 10 |
glial cell (sensu Vertebrata) | 1.64e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 1.64e-07 | 10 |
glial cell | 1.64e-07 | 10 |
glioblast | 1.64e-07 | 10 |
glioblast (sensu Vertebrata) | 1.64e-07 | 10 |
autonomic neuron | 1.71e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.