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FFCP PHASE1:Mm9::chr2:113839356..113839374,-: Difference between revisions

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|id=chr2:113839356..113839374,-
|id=chr2:113839356..113839374,-
|ontology_enrichment_celltype=CL:0000540!4.37e-18!33;CL:0000047!4.37e-18!33;CL:0000031!4.37e-18!33;CL:0000404!4.37e-18!33;CL:0000393!6.01e-13!39;CL:0000211!6.01e-13!39;CL:0000117!2.43e-12!23;CL:0000337!2.43e-12!23;CL:0000221!5.60e-11!44;CL:0000133!5.60e-11!44;CL:0002319!5.82e-11!43;CL:0000055!1.42e-07!50;CL:0000107!4.63e-07!9
|ontology_enrichment_celltype=CL:0000540!4.37e-18!33;CL:0000047!4.37e-18!33;CL:0000031!4.37e-18!33;CL:0000404!4.37e-18!33;CL:0000393!6.01e-13!39;CL:0000211!6.01e-13!39;CL:0000117!2.43e-12!23;CL:0000337!2.43e-12!23;CL:0000221!5.60e-11!44;CL:0000133!5.60e-11!44;CL:0002319!5.82e-11!43;CL:0000055!1.42e-07!50;CL:0000107!4.63e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000540,3.84e-16,33;CL:0000047,3.84e-16,33;CL:0000031,3.84e-16,33;CL:0000404,3.84e-16,33;CL:0000393,5.45e-12,39;CL:0000211,5.45e-12,39;CL:0000117,2.34e-10,23;CL:0000337,2.34e-10,23;CL:0002319,6.33e-10,43;CL:0000221,1.78e-09,44;CL:0000133,1.78e-09,44;CL:0000107,3.54e-08,9
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!3.24e-29!71;UBERON:0003075!3.24e-29!71;UBERON:0007284!3.24e-29!71;UBERON:0001017!6.60e-29!73;UBERON:0005743!6.60e-29!73;UBERON:0004121!1.18e-27!102;UBERON:0000924!1.18e-27!102;UBERON:0006601!1.18e-27!102;UBERON:0000073!2.59e-27!75;UBERON:0001016!2.59e-27!75;UBERON:0001049!2.51e-20!52;UBERON:0005068!2.51e-20!52;UBERON:0006241!2.51e-20!52;UBERON:0007135!2.51e-20!52;UBERON:0000033!4.38e-19!63;UBERON:0000955!4.47e-18!50;UBERON:0006238!4.47e-18!50;UBERON:0002616!2.43e-17!49;UBERON:0003056!3.43e-17!49;UBERON:0003080!5.74e-15!40;UBERON:0002780!2.01e-14!39;UBERON:0001890!2.01e-14!39;UBERON:0006240!2.01e-14!39;UBERON:0002020!3.19e-14!34;UBERON:0002791!1.80e-10!29;UBERON:0003528!1.80e-10!29;UBERON:0001893!1.80e-10!29;UBERON:0007811!4.54e-09!86;UBERON:0000153!4.01e-07!94;UBERON:0002410!4.63e-07!9;UBERON:0002342!6.32e-07!10;UBERON:0005062!6.32e-07!10
|ontology_enrichment_uberon=UBERON:0002346!3.24e-29!71;UBERON:0003075!3.24e-29!71;UBERON:0007284!3.24e-29!71;UBERON:0001017!6.60e-29!73;UBERON:0005743!6.60e-29!73;UBERON:0004121!1.18e-27!102;UBERON:0000924!1.18e-27!102;UBERON:0006601!1.18e-27!102;UBERON:0000073!2.59e-27!75;UBERON:0001016!2.59e-27!75;UBERON:0001049!2.51e-20!52;UBERON:0005068!2.51e-20!52;UBERON:0006241!2.51e-20!52;UBERON:0007135!2.51e-20!52;UBERON:0000033!4.38e-19!63;UBERON:0000955!4.47e-18!50;UBERON:0006238!4.47e-18!50;UBERON:0002616!2.43e-17!49;UBERON:0003056!3.43e-17!49;UBERON:0003080!5.74e-15!40;UBERON:0002780!2.01e-14!39;UBERON:0001890!2.01e-14!39;UBERON:0006240!2.01e-14!39;UBERON:0002020!3.19e-14!34;UBERON:0002791!1.80e-10!29;UBERON:0003528!1.80e-10!29;UBERON:0001893!1.80e-10!29;UBERON:0007811!4.54e-09!86;UBERON:0000153!4.01e-07!94;UBERON:0002410!4.63e-07!9;UBERON:0002342!6.32e-07!10;UBERON:0005062!6.32e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.12e-27,73;UBERON:0001016,2.42e-26,75;UBERON:0002346,5.10e-23,64;UBERON:0003075,5.10e-23,64;UBERON:0007284,5.10e-23,64;UBERON:0004121,1.65e-22,95;UBERON:0000924,1.65e-22,95;UBERON:0006601,1.65e-22,95;UBERON:0000073,8.21e-20,54;UBERON:0001049,1.19e-18,52;UBERON:0005068,1.19e-18,52;UBERON:0006241,1.19e-18,52;UBERON:0007135,1.19e-18,52;UBERON:0010371,7.48e-18,73;UBERON:0010314,1.48e-16,92;UBERON:0000955,1.57e-14,47;UBERON:0006238,1.57e-14,47;UBERON:0003056,4.51e-14,49;UBERON:0002616,9.37e-14,46;UBERON:0002020,1.75e-12,34;UBERON:0003080,2.47e-12,40;UBERON:0002780,9.55e-12,39;UBERON:0001890,9.55e-12,39;UBERON:0006240,9.55e-12,39;UBERON:0003528,1.80e-08,29;UBERON:0002791,1.80e-08,29;UBERON:0001893,1.80e-08,29;UBERON:0002410,3.54e-08,9;UBERON:0003076,2.07e-07,12;UBERON:0003057,2.07e-07,12;UBERON:0002420,5.22e-07,8;UBERON:0007245,5.22e-07,8;UBERON:0010009,5.22e-07,8;UBERON:0010011,5.22e-07,8;UBERON:0000454,5.22e-07,8;UBERON:0002240,6.21e-07,6;UBERON:0005174,6.21e-07,6;UBERON:0001137,6.21e-07,6
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.7227724255587,7.93486468908049,16.4796164911607,0,0,0,0,0,0.299600110518405,0,0.622137673850866,0.540023753326763,0.841299845405528,33.9924671440526,35.3389665522582,0.979926393719632,0.766763768145891,3.67687514644008,5.50579404996943,3.06449611404451,3.84016333140609,15.5625819521629,10.6125666578795,13.5437476344758,3.90856198601933,5.06486349028512,3.36156145108982,41.5426305517871,23.9184423742493,19.0127434741807,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.563373679106722,0,0,0,0,0,0,0.34255163915718,0,2.52351636410202,6.07198643681475,13.3964810457342,5.99600292865752,8.89263579260473,6.46737889246376,1.13099932196708,0,0,0,0,0,0,0,3.80615036115011,5.86450779077674,0,0,0,0,4.79330046095433,3.66000482254901,7.79056983099759,3.82413504423008,3.83573185995496,4.57133698031032,3.56930778749067,0.101839363850316,0,0,11.7847439296425,0,0.459804208866946,0.180062129805349,1.65775299619287,2.31324097114515,4.35586648968489,6.65282244374075,51.4819707770641,0,0,0,0.876782929710299,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0.393528463494808,0.154267112887378,0,0,0,0,0,0,0,0,0,2.10289948564127,5.45394445610208,0,0.264450566663544,0.639864751605702,3.0190767341857,1.41754207454303,1.00841762311671,0.667134131534611,1.33157938278791,0,1.15289268306808,0.502670417600539,0.397912944082302,0.58489226135736,0,0,0.597423819763102,0.948339504765408,1.37098215131675,0,0,0,0.350679099451593,0,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.325929952884052,0,0,0.167506257441816,0.476087281772027,0,0,0,0,0,0,0,0,0,0,0,6.90367536947505,10.5490517932983,0,0,10.0962630213202,7.80877488593277,20.0343759891503,2.62865677747807,3.7875774594007,6.51076020814315,10.1202675418724,13.7360253218317,12.2539211163422,12.8528526568723,0,0,0,0,1.32745138339963,2.6705869977048,2.72091201268276,3.58349651536206,3.54362271456927,3.68922177532713,2.32585463851399,3.27180356529755,2.49548164869305,2.52829406348653,0,0,2.38307724027652,0.18006109403131,0.905510786479282,4.71541477069503,6.20690817747958,6.95638388648075,3.62007845324666,8.82948352432338,0,0,0,0,0,0,0,0,0,4.63563255026274,0,0,0,0,0,0,0,0,0,0,0.632671987162271,2.43983360552218,1.18805874903981,1.46361807210128,1.9652630737156,0.944050424693745,0.826534557253359,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358053391334963,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.2950368523413,5.06357760157895,6.30185064783336,10.998603669996,4.11049511862385,2.2661816921691,4.72515750162264,0.900642406448441,2.71885445390523,6.73088405277366,0.726511433089237,0.798049746802062,0.853668028770671,1.94485373654635,1.46729213839588,3.30918315210025,2.44471400581777,3.09052585858341,0.962757628775446,1.76888048234658,2.5347929989024,1.88626341386076,2.34103768674706,2.17685518176556,1.66562859971278,2.38146845641537,2.78122382267653,1.54327376370964,2.47251540481984,1.61918812147837,2.05721551431249,2.12970967391205,1.90748951957857,1.16277133305863,2.35273451038327,1.69229215783353,2.0122077016005,1.31534855718921,1.49384525230448,1.68342681497322,2.01679530811096,1.67457620038458,1.22769312950907,1.54936841185966,2.12197272079256,5.74564329257276,2.10538447600868,1.28922632428979,1.3390183244819,0.661774257358546,1.39120701372253
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.7227724255587,7.93486468908049,16.4796164911607,0,0,0,0,0,0.299600110518405,0,0.622137673850866,0.540023753326763,0.841299845405528,33.9924671440526,35.3389665522582,0.979926393719632,0.766763768145891,3.67687514644008,5.50579404996943,3.06449611404451,3.84016333140609,15.5625819521629,10.6125666578795,13.5437476344758,3.90856198601933,5.06486349028512,3.36156145108982,41.5426305517871,23.9184423742493,19.0127434741807,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.563373679106722,0,0,0,0,0,0,0.34255163915718,0,2.52351636410202,6.07198643681475,13.3964810457342,5.99600292865752,8.89263579260473,6.46737889246376,1.13099932196708,0,0,0,0,0,0,0,3.80615036115011,5.86450779077674,0,0,0,0,4.79330046095433,3.66000482254901,7.79056983099759,3.82413504423008,3.83573185995496,4.57133698031032,3.56930778749067,0.101839363850316,0,0,11.7847439296425,0,0.459804208866946,0.180062129805349,1.65775299619287,2.31324097114515,4.35586648968489,6.65282244374075,51.4819707770641,0,0,0,0.876782929710299,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0.393528463494808,0.154267112887378,0,0,0,0,0,0,0,0,0,2.10289948564127,5.45394445610208,0,0.264450566663544,0.639864751605702,3.0190767341857,1.41754207454303,1.00841762311671,0.667134131534611,1.33157938278791,0,1.15289268306808,0.502670417600539,0.397912944082302,0.58489226135736,0,0,0.597423819763102,0.948339504765408,1.37098215131675,0,0,0,0.350679099451593,0,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.325929952884052,0,0,0.167506257441816,0.476087281772027,0,0,0,0,0,0,0,0,0,0,0,6.90367536947505,10.5490517932983,0,0,10.0962630213202,7.80877488593277,20.0343759891503,2.62865677747807,3.7875774594007,6.51076020814315,10.1202675418724,13.7360253218317,12.2539211163422,12.8528526568723,0,0,0,0,1.32745138339963,2.6705869977048,2.72091201268276,3.58349651536206,3.54362271456927,3.68922177532713,2.32585463851399,3.27180356529755,2.49548164869305,2.52829406348653,0,0,2.38307724027652,0.18006109403131,0.905510786479282,4.71541477069503,6.20690817747958,6.95638388648075,3.62007845324666,8.82948352432338,0,0,0,0,0,0,0,0,0,4.63563255026274,0,0,0,0,0,0,0,0,0,0,0.632671987162271,2.43983360552218,1.18805874903981,1.46361807210128,1.9652630737156,0.944050424693745,0.826534557253359,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358053391334963,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.2950368523413,5.06357760157895,6.30185064783336,10.998603669996,4.11049511862385,2.2661816921691,4.72515750162264,0.900642406448441,2.71885445390523,6.73088405277366,0.726511433089237,0.798049746802062,0.853668028770671,1.94485373654635,1.46729213839588,3.30918315210025,2.44471400581777,3.09052585858341,0.962757628775446,1.76888048234658,2.5347929989024,1.88626341386076,2.34103768674706,2.17685518176556,1.66562859971278,2.38146845641537,2.78122382267653,1.54327376370964,2.47251540481984,1.61918812147837,2.05721551431249,2.12970967391205,1.90748951957857,1.16277133305863,2.35273451038327,1.69229215783353,2.0122077016005,1.31534855718921,1.49384525230448,1.68342681497322,2.01679530811096,1.67457620038458,1.22769312950907,1.54936841185966,2.12197272079256,5.74564329257276,2.10538447600868,1.28922632428979,1.3390183244819,0.661774257358546,1.39120701372253
|short_description=p1@Gjd2
|short_description=p1@Gjd2
}}
}}

Revision as of 16:41, 13 November 2012

Short description:p1@Gjd2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Gjd2_5end
Coexpression cluster:MCL_coexpression_mm9:1702
Association with transcript: -1bp_to_ENSMUST00000090275, NM_010290, uc008lpu.1_5end
EntrezGene:Gjd2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Gjd2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C310.72
Mouse Granule cells, donor2.CNhs12357.11731-123E37.93
Mouse Granule cells, donor3.CNhs12108.11636-122C716.48
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F133.99
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D535.34
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.77
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.06
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D415.56
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F410.61
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D813.54
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.91
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.06
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.36
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D641.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F623.92
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E119.01
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D72.52
adrenal gland, embryo E14.CNhs11038.406-44C56.07
adrenal gland, embryo E16.CNhs11004.1254-43D613.40
adrenal gland, embryo E17.CNhs11043.1263-45I16.00
adrenal gland, embryo E18.CNhs11026.1262-18F58.89
adrenal gland, neonate N00.CNhs11191.1311-23C16.47
adrenal gland, neonate N25.CNhs11223.1377-27I31.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.81
cerebellum, neonate N30.CNhs11135.1395-42I25.86
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A44.79
corpus striatum, adult.CNhs10487.19-21D83.66
corpus striatum, neonate N00.CNhs11226.630-43F17.79
cortex, adult.CNhs10473.12-14D53.82
cortex, neonate N30.CNhs11107.1392-42F23.84
diencephalon, adult.CNhs10482.20-12F24.57
diencephalon, neonate N30.CNhs11201.1388-42B23.57
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G411.78
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D41.66
eyeball, neonate N00.CNhs11207.633-15C62.31
eyeball, neonate N01.CNhs11140.1532-43E74.36
eyeball, neonate N02.CNhs11205.1551-44G86.65
eyeball, neonate N16.CNhs11188.777-19A251.48
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E82.10
hippocampus, neonate N00.CNhs11228.627-43G15.45
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D53.02
intestine, embryo E15.CNhs10602.976-16D81.42
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F71.33
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E91.15
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F81.37
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C26.90
medulla oblongata, neonate N30.CNhs11200.1396-42A310.55
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E110.10
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.81
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E320.03
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.63
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.79
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D96.51
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D410.12
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D513.74
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D612.25
olfactory brain, adult.CNhs10489.18-22I912.85
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F42.67
pancreas, embryo E15.CNhs11042.1556-45F22.72
pancreas, embryo E16.CNhs11003.460-26E53.58
pancreas, embryo E17.CNhs10599.1558-45G33.54
pancreas, embryo E18.CNhs10580.1535-43I73.69
pancreas, neonate N00.CNhs11105.645-26G92.33
pancreas, neonate N01.CNhs11138.1531-43D73.27
pancreas, neonate N02.CNhs11139.1539-43D82.50
pancreas, neonate N16.CNhs11136.787-43B62.53
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.91
pituitary gland, embryo E14.CNhs11037.398-44A54.72
pituitary gland, embryo E15.CNhs10592.427-16B96.21
pituitary gland, embryo E16.CNhs11036.449-43F66.96
pituitary gland, embryo E17.CNhs11039.1265-44F53.62
pituitary gland, neonate N00.CNhs11190.1308-22E98.83
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C94.64
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G82.44
stomach, embryo E16.CNhs11022.459-17D41.19
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C61.97
stomach, neonate N03.CNhs11193.1340-24B80.94
stomach, neonate N07.CNhs11210.718-18A90.83
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A111.30
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.06
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.30
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D711.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.73
whole body, embryo E11.CNhs11014.324-5I80.73
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F23.31
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.34
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.78
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.13
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.35
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.55
whole body, embryo E17.5.CNhs10513.490-9F92.12
whole body, embryo E17.CNhs10517.475-3I55.75
whole body, embryo E18.CNhs10516.493-3B32.11
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system1.12e-2773
nervous system2.42e-2675
neurectoderm5.10e-2364
neural plate5.10e-2364
presumptive neural plate5.10e-2364
ectoderm-derived structure1.65e-2295
ectoderm1.65e-2295
presumptive ectoderm1.65e-2295
regional part of nervous system8.21e-2054
neural tube1.19e-1852
neural rod1.19e-1852
future spinal cord1.19e-1852
neural keel1.19e-1852
ecto-epithelium7.48e-1873
structure with developmental contribution from neural crest1.48e-1692
brain1.57e-1447
future brain1.57e-1447
pre-chordal neural plate4.51e-1449
regional part of brain9.37e-1446
gray matter1.75e-1234
anterior neural tube2.47e-1240
regional part of forebrain9.55e-1239
forebrain9.55e-1239
future forebrain9.55e-1239
brain grey matter1.80e-0829
regional part of telencephalon1.80e-0829
telencephalon1.80e-0829
autonomic nervous system3.54e-089
posterior neural tube2.07e-0712
chordal neural plate2.07e-0712
basal ganglion5.22e-078
nuclear complex of neuraxis5.22e-078
aggregate regional part of brain5.22e-078
collection of basal ganglia5.22e-078
cerebral subcortex5.22e-078
spinal cord6.21e-076
dorsal region element6.21e-076
dorsum6.21e-076







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