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FFCP PHASE1:Mm9::chr12:73337679..73337695,-: Difference between revisions

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|id=chr12:73337679..73337695,-
|id=chr12:73337679..73337695,-
|ontology_enrichment_celltype=CL:0000221!1.27e-15!44;CL:0000133!1.27e-15!44;CL:0002319!1.55e-15!43;CL:0000540!4.37e-15!33;CL:0000047!4.37e-15!33;CL:0000031!4.37e-15!33;CL:0000404!4.37e-15!33;CL:0000117!1.63e-14!23;CL:0000337!1.63e-14!23;CL:0000055!7.24e-11!50;CL:0000393!1.45e-10!39;CL:0000211!1.45e-10!39
|ontology_enrichment_celltype=CL:0000221!1.27e-15!44;CL:0000133!1.27e-15!44;CL:0002319!1.55e-15!43;CL:0000540!4.37e-15!33;CL:0000047!4.37e-15!33;CL:0000031!4.37e-15!33;CL:0000404!4.37e-15!33;CL:0000117!1.63e-14!23;CL:0000337!1.63e-14!23;CL:0000055!7.24e-11!50;CL:0000393!1.45e-10!39;CL:0000211!1.45e-10!39
|ontology_enrichment_celltype_v019_2=CL:0000221,2.12e-16,44;CL:0000133,2.12e-16,44;CL:0002319,2.60e-16,43;CL:0000540,7.79e-16,33;CL:0000047,7.79e-16,33;CL:0000031,7.79e-16,33;CL:0000404,7.79e-16,33;CL:0000117,3.13e-15,23;CL:0000337,3.13e-15,23;CL:0000393,9.01e-11,39;CL:0000211,9.01e-11,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!8.02e-32!73;UBERON:0005743!8.02e-32!73;UBERON:0000073!8.61e-32!75;UBERON:0001016!8.61e-32!75;UBERON:0004121!4.08e-29!102;UBERON:0000924!4.08e-29!102;UBERON:0006601!4.08e-29!102;UBERON:0002346!5.34e-29!71;UBERON:0003075!5.34e-29!71;UBERON:0007284!5.34e-29!71;UBERON:0001049!4.64e-25!52;UBERON:0005068!4.64e-25!52;UBERON:0006241!4.64e-25!52;UBERON:0007135!4.64e-25!52;UBERON:0000033!3.40e-24!63;UBERON:0000955!3.56e-23!50;UBERON:0006238!3.56e-23!50;UBERON:0002616!1.13e-22!49;UBERON:0003056!1.09e-20!49;UBERON:0002020!3.20e-20!34;UBERON:0003080!1.17e-18!40;UBERON:0002780!5.21e-18!39;UBERON:0001890!5.21e-18!39;UBERON:0006240!5.21e-18!39;UBERON:0002791!7.43e-17!29;UBERON:0003528!7.43e-17!29;UBERON:0001893!7.43e-17!29;UBERON:0000956!7.50e-12!21;UBERON:0001869!7.50e-12!21;UBERON:0000203!7.50e-12!21;UBERON:0007811!9.16e-11!86;UBERON:0002619!1.02e-09!17;UBERON:0000153!3.26e-09!94;UBERON:0002021!1.66e-07!10;UBERON:0000411!1.66e-07!10;UBERON:0001950!1.66e-07!10;UBERON:0003076!5.69e-07!12;UBERON:0003057!5.69e-07!12
|ontology_enrichment_uberon=UBERON:0001017!8.02e-32!73;UBERON:0005743!8.02e-32!73;UBERON:0000073!8.61e-32!75;UBERON:0001016!8.61e-32!75;UBERON:0004121!4.08e-29!102;UBERON:0000924!4.08e-29!102;UBERON:0006601!4.08e-29!102;UBERON:0002346!5.34e-29!71;UBERON:0003075!5.34e-29!71;UBERON:0007284!5.34e-29!71;UBERON:0001049!4.64e-25!52;UBERON:0005068!4.64e-25!52;UBERON:0006241!4.64e-25!52;UBERON:0007135!4.64e-25!52;UBERON:0000033!3.40e-24!63;UBERON:0000955!3.56e-23!50;UBERON:0006238!3.56e-23!50;UBERON:0002616!1.13e-22!49;UBERON:0003056!1.09e-20!49;UBERON:0002020!3.20e-20!34;UBERON:0003080!1.17e-18!40;UBERON:0002780!5.21e-18!39;UBERON:0001890!5.21e-18!39;UBERON:0006240!5.21e-18!39;UBERON:0002791!7.43e-17!29;UBERON:0003528!7.43e-17!29;UBERON:0001893!7.43e-17!29;UBERON:0000956!7.50e-12!21;UBERON:0001869!7.50e-12!21;UBERON:0000203!7.50e-12!21;UBERON:0007811!9.16e-11!86;UBERON:0002619!1.02e-09!17;UBERON:0000153!3.26e-09!94;UBERON:0002021!1.66e-07!10;UBERON:0000411!1.66e-07!10;UBERON:0001950!1.66e-07!10;UBERON:0003076!5.69e-07!12;UBERON:0003057!5.69e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.66e-33,73;UBERON:0001016,1.79e-33,75;UBERON:0002346,2.25e-29,64;UBERON:0003075,2.25e-29,64;UBERON:0007284,2.25e-29,64;UBERON:0004121,1.74e-28,95;UBERON:0000924,1.74e-28,95;UBERON:0006601,1.74e-28,95;UBERON:0000073,1.38e-27,54;UBERON:0001049,2.29e-26,52;UBERON:0005068,2.29e-26,52;UBERON:0006241,2.29e-26,52;UBERON:0007135,2.29e-26,52;UBERON:0010314,1.15e-24,92;UBERON:0010371,2.26e-23,73;UBERON:0000955,1.40e-22,47;UBERON:0006238,1.40e-22,47;UBERON:0002616,4.65e-22,46;UBERON:0003056,9.46e-22,49;UBERON:0002020,2.95e-21,34;UBERON:0003080,1.32e-19,40;UBERON:0002780,6.38e-19,39;UBERON:0001890,6.38e-19,39;UBERON:0006240,6.38e-19,39;UBERON:0003528,1.06e-17,29;UBERON:0002791,1.06e-17,29;UBERON:0001893,1.06e-17,29;UBERON:0000956,2.02e-12,21;UBERON:0001869,2.02e-12,21;UBERON:0000203,2.02e-12,21;UBERON:0002619,3.61e-10,17;UBERON:0002021,7.75e-08,10;UBERON:0000411,7.75e-08,10;UBERON:0001950,7.75e-08,10;UBERON:0003076,2.84e-07,12;UBERON:0003057,2.84e-07,12
|phase1_expression=14.8938427807458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,78.9201732601928,0,0,0,0,0,0,0,0,0,0,0,0,15.8481681015439,0,0,0,0,0,0,0,0,0,0,0,0,16.4302182313088,15.6978112593922,7.46933021297204,3.69416808241138,9.09911740564856,12.9377307928474,0,0,0,0.514518872071894,0.85960031981627,0,479.085379315528,709.905894183068,426.568534559659,2.37191172448392,1.77858959222228,0,2.96659908770092,0,35.9520132622086,66.4697668206289,260.053547669662,296.338034638061,286.883247283285,465.325453593796,475.088231586921,298.142605289198,243.639187328357,231.643134225725,282.997814168429,297.383810400402,308.288312245281,537.56850878827,539.045196105398,503.20231595783,364.054630697801,334.84375296885,365.035013938799,459.620593338922,424.552352142925,529.93362448133,4.01348824665875,10.202160614416,0,0,0,2.15881276655127,0,0,21.2071074398945,0,0,0,12.9575946194546,0,0,0,0,0,0,11.9893073705013,0,9.20341262201914,23.7674897669606,34.404599049272,29.7493991460315,35.5705431704189,36.2173217977971,3.76999773989026,0.247194967734374,1.01219549843938,0,0.323533699894818,0.220841518460394,0,1.86391761218122,209.631050660268,249.241581108012,1.78819938646014,0,0,0,449.072336935658,264.435348429166,629.276995381225,532.771541389327,650.540123448361,347.213822459025,383.213863366044,0.611036183101898,0,0,9.04899980311838,7.28674480591141,46.2103229911281,58.1600679271278,55.7607825992146,83.3447114603766,68.7970677929643,68.402258928602,35.9597685327232,1.72454394346274,1.70195472151037,0.351902248327898,0.43839146485515,0.278047249225598,0.696504333044333,0.205782136407943,0.59710280045548,0,0,0,3.72826390563903,3.04883877975425,3.96136535214233,2.3674473558521,1.77087808572663,1.85120535464854,1.62773761325285,1.87791380979733,1.16765342367169,0.987359099480883,2.95501435342371,1.86458261955468,1.60819986167866,1.53685080703735,2.01309628140558,466.633395863798,614.134726679569,0,1.58670339998127,3.41261200856374,4.87697010906921,12.7578786708872,10.8909103296605,10.0070119730192,13.5060194539917,3.32170343081158,13.3406153326449,8.79673230800943,9.94782360205754,10.7230247915516,2.69645822596266,3.45820879799511,4.58024928485045,1.70701110857774,3.77020091612105,0,2.03651327845314,1.74557238450863,2.45475369616115,0.0632365371242573,0,0,0,0,0,0.393117990226406,0,0.202860121388503,0.241177159752417,0,0,0,0,0,0.372140947668503,0,0,0,0,0.184753190166605,4.9267767060326,0.651859905768103,0.848725428875941,0.938760993154008,1.34005005953453,0.952174563544055,1.56106918286239,5.2019597555043,3.98636441367795,5.10255259703959,0.327726629431476,1.55416483679306,0.578596234326046,0,0,0,0,315.000257556048,292.677581420731,0,0,25.2406575533005,28.5020283336546,33.8214734440494,6.69112634267146,14.0363164671908,13.3045969470751,20.6453457854196,33.3171678018896,25.2984177885775,187.972970106757,0,0.712262414669021,0.325773918707152,0,0,1.45668381692989,1.81394134178851,1.32023555829129,0.885905678642318,2.45948118355142,3.6179961043551,3.27180356529755,1.06949213515416,1.58018378967908,0,2.06271086496374,10.8940673841212,14.9450708045987,12.2890749593617,8.3591443662321,2.12808280370728,20.155676389034,32.2516080380157,35.6223990464081,0.469343416127421,0,9.70324951441832,0,0.161464426695906,0,0.119372344003136,0.164140899745061,4.08073171281791,302.05781697512,0,0.619160603889667,0,0,0,0,0,0,0,1.90934123603023,4.27053591334533,13.419084830372,8.96444328820951,6.89991376847747,7.42432716737004,10.1148259788616,8.01738520535759,3.14107130380836,3.24037433229482,0,0,0,0,0.388902376688095,0.258319646955462,0.675824501963113,0.352071715937262,1.0416350787516,1.46803082195995,0.241584120826006,0.288030006257865,0,4.05450430580328,1.02710957164827,0,1.07416017400489,0,0,0.147689527174577,0.100966449948148,0,0.201652370273681,0,0,0.116876902181569,1.36038230169127,0,0,0,6.95482538515886,0,0,0.857473516316263,0,521.83070257817,452.499707486555,521.334917229851,483.938561479824,369.944560676147,393.560220540034,428.639287647197,446.268312395202,396.952750270163,426.6344968835,11.9355449721803,47.0849350613217,77.0008561951145,60.5335725500052,53.8705827953914,42.2840069435033,78.0086014583669,75.2027958921964,83.7599137034638,86.4224464232187,76.0437899670719,74.8846575302722,76.5987531103638,74.0130761800289,81.5583659169708,61.4418861755165,77.6424983830532,77.7424158468731,76.647977549415,71.5386751853171,50.0589108482706,60.8742015126528,67.0005693751972,65.8419267344448,69.8291602681753,68.8762908238247,84.3297954943481,77.079425451288,65.5933869875512,77.9987757604256,78.8922870525758,78.9020903828263,50.3354183098718,64.4537259333619,58.8365163492481,225.329141300027,68.0740980576138,78.8576768357255,36.7273597572179,17.4267221104417,17.8538233427725
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|short_description=p1@Rtn1
|short_description=p1@Rtn1
}}
}}

Revision as of 14:38, 13 November 2012

Short description:p1@Rtn1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rtn1_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: -6bp_to_ENSMUST00000144181_5end
EntrezGene:Rtn1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rtn1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G714.89
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A378.92
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B716.43
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C215.70
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B87.47
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.69
Mouse Astrocytes, donor2.CNhs12078.11552-120C49.10
Mouse Astrocytes, donor3.CNhs12107.11633-122C412.94
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C3479.09
Mouse Granule cells, donor2.CNhs12357.11731-123E3709.91
Mouse Granule cells, donor3.CNhs12108.11636-122C7426.57
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.37
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C835.95
Mouse Microglia, donor2.CNhs12634.11736-123E866.47
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5260.05
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5296.34
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9286.88
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1465.33
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5475.09
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2298.14
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2243.64
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6231.64
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3283.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3297.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7308.29
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4537.57
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4539.05
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8503.20
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4364.05
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5334.84
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6365.04
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6459.62
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6424.55
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1529.93
Mouse Schwann, donor1.CNhs12507.11728-123D94.01
Mouse Schwann, donor2.CNhs12573.11746-123F910.20
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A721.21
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G612.96
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B611.99
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D79.20
adrenal gland, embryo E14.CNhs11038.406-44C523.77
adrenal gland, embryo E16.CNhs11004.1254-43D634.40
adrenal gland, embryo E17.CNhs11043.1263-45I129.75
adrenal gland, embryo E18.CNhs11026.1262-18F535.57
adrenal gland, neonate N00.CNhs11191.1311-23C136.22
adrenal gland, neonate N25.CNhs11223.1377-27I33.77
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H11.01
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B2209.63
cerebellum, neonate N30.CNhs11135.1395-42I2249.24
colon, adult.CNhs10468.36-18H71.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A4449.07
corpus striatum, adult.CNhs10487.19-21D8264.44
corpus striatum, neonate N00.CNhs11226.630-43F1629.28
cortex, adult.CNhs10473.12-14D5532.77
cortex, neonate N30.CNhs11107.1392-42F2650.54
diencephalon, adult.CNhs10482.20-12F2347.21
diencephalon, neonate N30.CNhs11201.1388-42B2383.21
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G49.05
eyeball, embryo E12.CNhs11016.345-16C67.29
eyeball, embryo E14.CNhs10521.399-16E246.21
eyeball, embryo E15.CNhs10593.426-16C958.16
eyeball, embryo E17.CNhs11023.1261-18D455.76
eyeball, neonate N00.CNhs11207.633-15C683.34
eyeball, neonate N01.CNhs11140.1532-43E768.80
eyeball, neonate N02.CNhs11205.1551-44G868.40
eyeball, neonate N16.CNhs11188.777-19A235.96
forelimb, embryo E11.CNhs10596.335-25E21.72
forelimb, embryo E12.CNhs10600.359-14H21.70
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E93.73
heart, embryo E12.CNhs11015.353-12F53.05
heart, embryo E13.CNhs11013.376-3I93.96
heart, embryo E14.CNhs10597.403-26D42.37
heart, embryo E15.CNhs11017.431-16C81.77
heart, embryo E16.CNhs11021.457-17C61.85
heart, embryo E17.CNhs11025.479-18E51.63
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E31.17
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G12.96
heart, neonate N16.CNhs11209.782-15G11.86
heart, neonate N20.CNhs11127.821-26I61.61
heart, neonate N25.CNhs11196.1351-25D31.54
heart, neonate N30.CNhs11202.1390-42D22.01
hippocampus, adult.CNhs10478.13-16E8466.63
hippocampus, neonate N00.CNhs11228.627-43G1614.13
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I53.41
intestine, embryo E13.CNhs11010.381-16D54.88
intestine, embryo E15.CNhs10602.976-16D812.76
intestine, embryo E16.CNhs10585.463-22H410.89
intestine, embryo E17.CNhs10582.482-18D310.01
intestine, embryo E18.CNhs10526.1289-20F713.51
intestine, neonate N00.CNhs11126.644-26D13.32
intestine, neonate N01.CNhs11192.1322-23E913.34
intestine, neonate N06.CNhs11102.688-20B88.80
intestine, neonate N07.CNhs11095.720-20F29.95
intestine, neonate N10.CNhs11098.755-23A510.72
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E33.46
intestine, neonate N30.CNhs11131.1384-42G14.58
kidney, embryo E14.CNhs10606.411-4I91.71
kidney, embryo E15.CNhs10997.434-16F83.77
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I22.04
kidney, embryo E18.CNhs11001.1288-20C71.75
kidney, neonate N00.CNhs11214.646-21G72.45
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G24.93
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A61.34
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C61.56
lung, neonate N06.CNhs11212.683-20E55.20
lung, neonate N07.CNhs11111.715-19A33.99
lung, neonate N10.CNhs11219.750-23E65.10
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C71.55
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C2315.00
medulla oblongata, neonate N30.CNhs11200.1396-42A3292.68
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E125.24
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E228.50
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E333.82
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D76.69
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D814.04
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D913.30
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D420.65
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D533.32
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D625.30
olfactory brain, adult.CNhs10489.18-22I9187.97
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F21.81
pancreas, embryo E16.CNhs11003.460-26E51.32
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I72.46
pancreas, neonate N00.CNhs11105.645-26G93.62
pancreas, neonate N01.CNhs11138.1531-43D73.27
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G810.89
pituitary gland, embryo E12.CNhs11018.346-16E614.95
pituitary gland, embryo E13.CNhs11009.370-44C712.29
pituitary gland, embryo E14.CNhs11037.398-44A58.36
pituitary gland, embryo E15.CNhs10592.427-16B92.13
pituitary gland, embryo E16.CNhs11036.449-43F620.16
pituitary gland, embryo E17.CNhs11039.1265-44F532.25
pituitary gland, neonate N00.CNhs11190.1308-22E935.62
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F89.70
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I14.08
spinal cord, adult.CNhs10505.24-13C9302.06
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E34.27
stomach, embryo E15.CNhs10603.1252-16G813.42
stomach, embryo E16.CNhs11022.459-17D48.96
stomach, embryo E17.CNhs11006.1035-18D56.90
stomach, embryo E18.CNhs10999.1286-20C67.42
stomach, neonate N03.CNhs11193.1340-24B810.11
stomach, neonate N07.CNhs11210.718-18A98.02
stomach, neonate N25.CNhs11104.1355-25E43.14
stomach, neonate N30.CNhs11134.1386-42I13.24
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I41.04
testis, neonate N10.CNhs11204.763-44D91.47
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I44.05
thymus, embryo E15.CNhs11005.430-45I21.03
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C11.07
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E46.95
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1521.83
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2452.50
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3521.33
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7483.94
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4369.94
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5393.56
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6428.64
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7446.27
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8396.95
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9426.63
whole body, embryo E11.CNhs11014.324-5I811.94
whole body, embryo E12.CNhs10587.857-27C947.08
whole body, embryo E13.CNhs10512.372-23H277.00
whole body, embryo E14.5.CNhs10578.420-27D260.53
whole body, embryo E14.CNhs10519.395-14B153.87
whole body, embryo E16.CNhs10514.453-14F242.28
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G578.01
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G575.20
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G583.76
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G586.42
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G576.04
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G574.88
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G576.60
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G574.01
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G581.56
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G561.44
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G577.64
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G577.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G576.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G571.54
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G550.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G560.87
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G567.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G565.84
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G569.83
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G568.88
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G584.33
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G577.08
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G565.59
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G578.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G578.89
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G578.90
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G550.34
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G564.45
whole body, embryo E17.5.CNhs10513.490-9F958.84
whole body, embryo E17.CNhs10517.475-3I5225.33
whole body, embryo E18.CNhs10516.493-3B368.07
whole body, neonate N00.CNhs10525.657-19C278.86
whole body, neonate N01.CNhs10576.659-23C636.73
whole body, neonate N06.CNhs10515.692-21D117.43
whole body, neonate N10.CNhs10518.761-6B417.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell2.12e-1644
neurectodermal cell2.12e-1644
neural cell2.60e-1643
neuron7.79e-1633
neuronal stem cell7.79e-1633
neuroblast7.79e-1633
electrically signaling cell7.79e-1633
CNS neuron (sensu Vertebrata)3.13e-1523
neuroblast (sensu Vertebrata)3.13e-1523
electrically responsive cell9.01e-1139
electrically active cell9.01e-1139

Uber anatomy
Ontology termp-valuen
central nervous system1.66e-3373
nervous system1.79e-3375
neurectoderm2.25e-2964
neural plate2.25e-2964
presumptive neural plate2.25e-2964
ectoderm-derived structure1.74e-2895
ectoderm1.74e-2895
presumptive ectoderm1.74e-2895
regional part of nervous system1.38e-2754
neural tube2.29e-2652
neural rod2.29e-2652
future spinal cord2.29e-2652
neural keel2.29e-2652
structure with developmental contribution from neural crest1.15e-2492
ecto-epithelium2.26e-2373
brain1.40e-2247
future brain1.40e-2247
regional part of brain4.65e-2246
pre-chordal neural plate9.46e-2249
gray matter2.95e-2134
anterior neural tube1.32e-1940
regional part of forebrain6.38e-1939
forebrain6.38e-1939
future forebrain6.38e-1939
brain grey matter1.06e-1729
regional part of telencephalon1.06e-1729
telencephalon1.06e-1729
cerebral cortex2.02e-1221
cerebral hemisphere2.02e-1221
pallium2.02e-1221
regional part of cerebral cortex3.61e-1017
occipital lobe7.75e-0810
visual cortex7.75e-0810
neocortex7.75e-0810
posterior neural tube2.84e-0712
chordal neural plate2.84e-0712







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