FFCP PHASE1:Mm9::chr6:126588640..126588687,-: Difference between revisions
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|id=chr6:126588640..126588687,- | |id=chr6:126588640..126588687,- | ||
|ontology_enrichment_celltype=CL:0000117!2.79e-11!23;CL:0000337!2.79e-11!23;CL:0002610!4.54e-09!3;CL:0002614!5.78e-09!3;CL:0000540!1.32e-08!33;CL:0000047!1.32e-08!33;CL:0000031!1.32e-08!33;CL:0000404!1.32e-08!33;CL:0000221!3.80e-08!44;CL:0000133!3.80e-08!44;CL:0002319!3.87e-07!43;CL:0000393!6.51e-07!39;CL:0000211!6.51e-07!39 | |ontology_enrichment_celltype=CL:0000117!2.79e-11!23;CL:0000337!2.79e-11!23;CL:0002610!4.54e-09!3;CL:0002614!5.78e-09!3;CL:0000540!1.32e-08!33;CL:0000047!1.32e-08!33;CL:0000031!1.32e-08!33;CL:0000404!1.32e-08!33;CL:0000221!3.80e-08!44;CL:0000133!3.80e-08!44;CL:0002319!3.87e-07!43;CL:0000393!6.51e-07!39;CL:0000211!6.51e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0002610,2.33e-17,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.33e-23!75;UBERON:0001016!3.33e-23!75;UBERON:0001017!3.08e-22!73;UBERON:0005743!3.08e-22!73;UBERON:0001049!2.06e-21!52;UBERON:0005068!2.06e-21!52;UBERON:0006241!2.06e-21!52;UBERON:0007135!2.06e-21!52;UBERON:0000955!6.61e-21!50;UBERON:0006238!6.61e-21!50;UBERON:0002616!2.34e-19!49;UBERON:0004121!3.25e-18!102;UBERON:0000924!3.25e-18!102;UBERON:0006601!3.25e-18!102;UBERON:0000033!3.56e-17!63;UBERON:0002298!3.16e-16!6;UBERON:0003076!7.56e-16!12;UBERON:0003057!7.56e-16!12;UBERON:0002020!1.11e-15!34;UBERON:0002346!2.89e-14!71;UBERON:0003075!2.89e-14!71;UBERON:0007284!2.89e-14!71;UBERON:0002950!1.80e-11!4;UBERON:0001891!1.80e-11!4;UBERON:0009616!1.80e-11!4;UBERON:0007811!3.67e-11!86;UBERON:0002791!1.29e-10!29;UBERON:0003528!1.29e-10!29;UBERON:0001893!1.29e-10!29;UBERON:0002240!5.20e-10!6;UBERON:0005174!5.20e-10!6;UBERON:0001137!5.20e-10!6;UBERON:0003080!8.57e-10!40;UBERON:0000153!9.13e-10!94;UBERON:0004684!4.54e-09!3;UBERON:0002275!4.54e-09!3;UBERON:0002038!5.78e-09!3;UBERON:0002308!5.78e-09!3;UBERON:0009663!5.78e-09!3;UBERON:0009661!5.78e-09!3;UBERON:0006331!5.78e-09!3;UBERON:0000125!5.78e-09!3;UBERON:0000025!1.05e-08!114;UBERON:0004111!1.17e-08!122;UBERON:0002780!1.61e-08!39;UBERON:0001890!1.61e-08!39;UBERON:0006240!1.61e-08!39;UBERON:0001948!1.43e-07!5;UBERON:0002315!1.43e-07!5;UBERON:0004733!1.85e-07!6;UBERON:0004732!1.85e-07!6;UBERON:0002028!1.85e-07!6;UBERON:0007277!1.85e-07!6;UBERON:0003056!1.93e-07!49;UBERON:0000475!8.31e-07!200 | |ontology_enrichment_uberon=UBERON:0000073!3.33e-23!75;UBERON:0001016!3.33e-23!75;UBERON:0001017!3.08e-22!73;UBERON:0005743!3.08e-22!73;UBERON:0001049!2.06e-21!52;UBERON:0005068!2.06e-21!52;UBERON:0006241!2.06e-21!52;UBERON:0007135!2.06e-21!52;UBERON:0000955!6.61e-21!50;UBERON:0006238!6.61e-21!50;UBERON:0002616!2.34e-19!49;UBERON:0004121!3.25e-18!102;UBERON:0000924!3.25e-18!102;UBERON:0006601!3.25e-18!102;UBERON:0000033!3.56e-17!63;UBERON:0002298!3.16e-16!6;UBERON:0003076!7.56e-16!12;UBERON:0003057!7.56e-16!12;UBERON:0002020!1.11e-15!34;UBERON:0002346!2.89e-14!71;UBERON:0003075!2.89e-14!71;UBERON:0007284!2.89e-14!71;UBERON:0002950!1.80e-11!4;UBERON:0001891!1.80e-11!4;UBERON:0009616!1.80e-11!4;UBERON:0007811!3.67e-11!86;UBERON:0002791!1.29e-10!29;UBERON:0003528!1.29e-10!29;UBERON:0001893!1.29e-10!29;UBERON:0002240!5.20e-10!6;UBERON:0005174!5.20e-10!6;UBERON:0001137!5.20e-10!6;UBERON:0003080!8.57e-10!40;UBERON:0000153!9.13e-10!94;UBERON:0004684!4.54e-09!3;UBERON:0002275!4.54e-09!3;UBERON:0002038!5.78e-09!3;UBERON:0002308!5.78e-09!3;UBERON:0009663!5.78e-09!3;UBERON:0009661!5.78e-09!3;UBERON:0006331!5.78e-09!3;UBERON:0000125!5.78e-09!3;UBERON:0000025!1.05e-08!114;UBERON:0004111!1.17e-08!122;UBERON:0002780!1.61e-08!39;UBERON:0001890!1.61e-08!39;UBERON:0006240!1.61e-08!39;UBERON:0001948!1.43e-07!5;UBERON:0002315!1.43e-07!5;UBERON:0004733!1.85e-07!6;UBERON:0004732!1.85e-07!6;UBERON:0002028!1.85e-07!6;UBERON:0007277!1.85e-07!6;UBERON:0003056!1.93e-07!49;UBERON:0000475!8.31e-07!200 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,2.33e-17,3;UBERON:0002275,2.33e-17,3;UBERON:0002259,2.06e-13,1;UBERON:0002314,2.06e-13,1;UBERON:0004061,2.06e-13,1;UBERON:0006777,2.06e-13,1;UBERON:0005882,2.06e-13,1;UBERON:0002950,2.76e-13,4;UBERON:0001891,2.76e-13,4;UBERON:0009616,2.76e-13,4;UBERON:0010286,2.76e-13,4;UBERON:0001017,1.47e-08,73;UBERON:0000073,1.70e-08,54;UBERON:0001016,2.47e-08,75;UBERON:0002420,2.84e-07,8;UBERON:0007245,2.84e-07,8;UBERON:0010009,2.84e-07,8;UBERON:0010011,2.84e-07,8;UBERON:0000454,2.84e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0.285650984403804,0.220868540951614,0,0,0,1.10115880999389,0.638436690425939,1.0752457327937,0,0,0,1.11673199600552,0.56276261003168,0.916789486660861,0,0.142371680799103,0.186399445825301,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878342391034642,0.83778682725382,0,0,0,0,1.04853447583376,1.37250180845588,0,0.347648640384553,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963303539926752,0.468846746368813,0,0.252470927204373,0,0,0,0,0.222798674082394,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0.32977250588296,0,0,0,0,0,5.37733375830478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,1.14579102687879,0.171853182343688,0,0.755393897389701,0,0.45032120322422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0.285650984403804,0.220868540951614,0,0,0,1.10115880999389,0.638436690425939,1.0752457327937,0,0,0,1.11673199600552,0.56276261003168,0.916789486660861,0,0.142371680799103,0.186399445825301,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878342391034642,0.83778682725382,0,0,0,0,1.04853447583376,1.37250180845588,0,0.347648640384553,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963303539926752,0.468846746368813,0,0.252470927204373,0,0,0,0,0.222798674082394,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0.32977250588296,0,0,0,0,0,5.37733375830478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,1.14579102687879,0.171853182343688,0,0.755393897389701,0,0.45032120322422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:126588640..126588687,- | |short_description=p@chr6:126588640..126588687,- | ||
}} | }} |
Revision as of 12:38, 13 November 2012
Short description: | p@chr6:126588640..126588687, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:126588640..126588687, - |
Coexpression cluster: | MCL_coexpression_mm9:304 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 2.33e-17 | 3 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 2.33e-17 | 3 |
reticular formation | 2.33e-17 | 3 |
corpora quadrigemina | 2.06e-13 | 1 |
midbrain tectum | 2.06e-13 | 1 |
neural tube mantle layer | 2.06e-13 | 1 |
tectal plate | 2.06e-13 | 1 |
neural tube alar plate | 2.06e-13 | 1 |
regional part of midbrain | 2.76e-13 | 4 |
midbrain | 2.76e-13 | 4 |
presumptive midbrain | 2.76e-13 | 4 |
midbrain neural tube | 2.76e-13 | 4 |
central nervous system | 1.47e-08 | 73 |
regional part of nervous system | 1.70e-08 | 54 |
nervous system | 2.47e-08 | 75 |
basal ganglion | 2.84e-07 | 8 |
nuclear complex of neuraxis | 2.84e-07 | 8 |
aggregate regional part of brain | 2.84e-07 | 8 |
collection of basal ganglia | 2.84e-07 | 8 |
cerebral subcortex | 2.84e-07 | 8 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.