FFCP PHASE1:Mm9::chr7:52308235..52308284,-: Difference between revisions
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|id=chr7:52308235..52308284,- | |id=chr7:52308235..52308284,- | ||
|ontology_enrichment_celltype=CL:0000540!3.56e-15!33;CL:0000047!3.56e-15!33;CL:0000031!3.56e-15!33;CL:0000404!3.56e-15!33;CL:0002319!2.83e-14!43;CL:0000221!5.53e-14!44;CL:0000133!5.53e-14!44;CL:0000393!3.91e-13!39;CL:0000211!3.91e-13!39;CL:0000055!6.99e-12!50;CL:0000117!8.35e-11!23;CL:0000337!8.35e-11!23 | |ontology_enrichment_celltype=CL:0000540!3.56e-15!33;CL:0000047!3.56e-15!33;CL:0000031!3.56e-15!33;CL:0000404!3.56e-15!33;CL:0002319!2.83e-14!43;CL:0000221!5.53e-14!44;CL:0000133!5.53e-14!44;CL:0000393!3.91e-13!39;CL:0000211!3.91e-13!39;CL:0000055!6.99e-12!50;CL:0000117!8.35e-11!23;CL:0000337!8.35e-11!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.01e-15,33;CL:0000047,1.01e-15,33;CL:0000031,1.01e-15,33;CL:0000404,1.01e-15,33;CL:0002319,8.12e-15,43;CL:0000221,1.63e-14,44;CL:0000133,1.63e-14,44;CL:0000393,1.67e-13,39;CL:0000211,1.67e-13,39;CL:0000117,3.97e-11,23;CL:0000337,3.97e-11,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.74e-23!73;UBERON:0005743!2.74e-23!73;UBERON:0000073!4.80e-22!75;UBERON:0001016!4.80e-22!75;UBERON:0004121!1.16e-16!102;UBERON:0000924!1.16e-16!102;UBERON:0006601!1.16e-16!102;UBERON:0002346!4.11e-15!71;UBERON:0003075!4.11e-15!71;UBERON:0007284!4.11e-15!71;UBERON:0001049!7.67e-15!52;UBERON:0005068!7.67e-15!52;UBERON:0006241!7.67e-15!52;UBERON:0007135!7.67e-15!52;UBERON:0000153!7.19e-14!94;UBERON:0000955!2.46e-13!50;UBERON:0006238!2.46e-13!50;UBERON:0002616!2.98e-13!49;UBERON:0002020!4.36e-12!34;UBERON:0000033!9.56e-12!63;UBERON:0003056!1.13e-11!49;UBERON:0007811!1.27e-11!86;UBERON:0003080!1.52e-11!40;UBERON:0002780!2.36e-11!39;UBERON:0001890!2.36e-11!39;UBERON:0006240!2.36e-11!39;UBERON:0002791!1.22e-09!29;UBERON:0003528!1.22e-09!29;UBERON:0001893!1.22e-09!29;UBERON:0000956!1.67e-07!21;UBERON:0001869!1.67e-07!21;UBERON:0000203!1.67e-07!21 | |ontology_enrichment_uberon=UBERON:0001017!2.74e-23!73;UBERON:0005743!2.74e-23!73;UBERON:0000073!4.80e-22!75;UBERON:0001016!4.80e-22!75;UBERON:0004121!1.16e-16!102;UBERON:0000924!1.16e-16!102;UBERON:0006601!1.16e-16!102;UBERON:0002346!4.11e-15!71;UBERON:0003075!4.11e-15!71;UBERON:0007284!4.11e-15!71;UBERON:0001049!7.67e-15!52;UBERON:0005068!7.67e-15!52;UBERON:0006241!7.67e-15!52;UBERON:0007135!7.67e-15!52;UBERON:0000153!7.19e-14!94;UBERON:0000955!2.46e-13!50;UBERON:0006238!2.46e-13!50;UBERON:0002616!2.98e-13!49;UBERON:0002020!4.36e-12!34;UBERON:0000033!9.56e-12!63;UBERON:0003056!1.13e-11!49;UBERON:0007811!1.27e-11!86;UBERON:0003080!1.52e-11!40;UBERON:0002780!2.36e-11!39;UBERON:0001890!2.36e-11!39;UBERON:0006240!2.36e-11!39;UBERON:0002791!1.22e-09!29;UBERON:0003528!1.22e-09!29;UBERON:0001893!1.22e-09!29;UBERON:0000956!1.67e-07!21;UBERON:0001869!1.67e-07!21;UBERON:0000203!1.67e-07!21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.80e-24,73;UBERON:0001016,5.38e-23,75;UBERON:0004121,8.58e-19,95;UBERON:0000924,8.58e-19,95;UBERON:0006601,8.58e-19,95;UBERON:0002346,2.81e-17,64;UBERON:0003075,2.81e-17,64;UBERON:0007284,2.81e-17,64;UBERON:0000073,2.21e-16,54;UBERON:0001049,2.11e-15,52;UBERON:0005068,2.11e-15,52;UBERON:0006241,2.11e-15,52;UBERON:0007135,2.11e-15,52;UBERON:0010371,1.39e-14,73;UBERON:0000955,8.71e-13,47;UBERON:0006238,8.71e-13,47;UBERON:0002616,1.06e-12,46;UBERON:0002020,1.71e-12,34;UBERON:0003056,4.39e-12,49;UBERON:0003080,6.17e-12,40;UBERON:0002780,9.78e-12,39;UBERON:0001890,9.78e-12,39;UBERON:0006240,9.78e-12,39;UBERON:0003528,6.29e-10,29;UBERON:0002791,6.29e-10,29;UBERON:0001893,6.29e-10,29;UBERON:0010314,2.72e-09,92;UBERON:0000956,8.18e-08,21;UBERON:0001869,8.18e-08,21;UBERON:0000203,8.18e-08,21 | |||
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| ||
|short_description=p2@Prr12 | |short_description=p2@Prr12 | ||
}} | }} |
Revision as of 12:01, 13 November 2012
Short description: | p2@Prr12 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Prr12_5end |
Coexpression cluster: | MCL_coexpression_mm9:2153 |
Association with transcript: | 0bp_to_ENSMUST00000057293, NM_175022, uc009gsu.1_5end |
EntrezGene: | Prr12 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.01e-15 | 33 |
neuronal stem cell | 1.01e-15 | 33 |
neuroblast | 1.01e-15 | 33 |
electrically signaling cell | 1.01e-15 | 33 |
neural cell | 8.12e-15 | 43 |
ectodermal cell | 1.63e-14 | 44 |
neurectodermal cell | 1.63e-14 | 44 |
electrically responsive cell | 1.67e-13 | 39 |
electrically active cell | 1.67e-13 | 39 |
CNS neuron (sensu Vertebrata) | 3.97e-11 | 23 |
neuroblast (sensu Vertebrata) | 3.97e-11 | 23 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.80e-24 | 73 |
nervous system | 5.38e-23 | 75 |
ectoderm-derived structure | 8.58e-19 | 95 |
ectoderm | 8.58e-19 | 95 |
presumptive ectoderm | 8.58e-19 | 95 |
neurectoderm | 2.81e-17 | 64 |
neural plate | 2.81e-17 | 64 |
presumptive neural plate | 2.81e-17 | 64 |
regional part of nervous system | 2.21e-16 | 54 |
neural tube | 2.11e-15 | 52 |
neural rod | 2.11e-15 | 52 |
future spinal cord | 2.11e-15 | 52 |
neural keel | 2.11e-15 | 52 |
ecto-epithelium | 1.39e-14 | 73 |
brain | 8.71e-13 | 47 |
future brain | 8.71e-13 | 47 |
regional part of brain | 1.06e-12 | 46 |
gray matter | 1.71e-12 | 34 |
pre-chordal neural plate | 4.39e-12 | 49 |
anterior neural tube | 6.17e-12 | 40 |
regional part of forebrain | 9.78e-12 | 39 |
forebrain | 9.78e-12 | 39 |
future forebrain | 9.78e-12 | 39 |
brain grey matter | 6.29e-10 | 29 |
regional part of telencephalon | 6.29e-10 | 29 |
telencephalon | 6.29e-10 | 29 |
structure with developmental contribution from neural crest | 2.72e-09 | 92 |
cerebral cortex | 8.18e-08 | 21 |
cerebral hemisphere | 8.18e-08 | 21 |
pallium | 8.18e-08 | 21 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.