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MacroAPE 1083:Motif GNCATC: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;0;12640;0!02;3160;3160;3160;3160!03;0;12640;0;0!04;12640;0;0;0!05;0;0;0;12640!06;0;12640;0;0 |macroape_1083_sample_pvalues=11376-118A8;0...")
 
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3;0.0157742!10429-106D6;0.00292591!10464-106H5;0.000947532!10827-111C8;0.0347952!10789-110H6;0.00385477!10828-111C9;0.00667687!10788-110H5;0.0114379!10792-110H9;0.0627968!10765-110E9;0.0349599!10829-111D1;0.00136427!10830-111D2;0.00430602!10831-111D3;0.0110897!10832-111D4;0.00700874!10833-111D5;0.000810863!10764-110E8;0.0119533!10770-110F5;0.0806591!10399-106A3;0.0103363!10400-106A4;0.0202148!10405-106A9;0.0220735!10834-111D6;0.0258862!10835-111D7;0.023516!10836-111D8;0.097539!10837-111D9;0.0313877!10699-109G6;0.138322!10802-111A1;0.00345776!10796-110I4;0.0183479!10010-101C1;0.612032!10810-111A9;0.339455!10421-106C7;0.358864!10708-109H6;0.00484648!12235-129G3;0.651156!12236-129G4;0.0607348!12237-129G5;0.568544!10167-103B5;0.384489!10151-102I7;0.920725!10428-106D5;0.590196!10795-110I3;0.0523673!10805-111A4;0.0140703!10052-101G7;0.978178!10189-103D9;0.0730101!10589-108D4;0.128235!10425-106D2;0.19117!10427-106D4;0.358064!10702-109G9;0.0108902!10432-106D9;0.256223!10496-107C1;0.564398!10718-109I7;0.713544!10011-101C2;0.00927416!10053-101G8;0.21083!10686-109F2;0.390648!10084-102B3;0.554615!10012-101C3;0.581463!10085-102B4;0.881418!10482-107A5;0.997385!10419-106C5;0.78017!10080-102A8;0.956569!10760-110E4;0.00137295!10709-109H7;0.61622!10710-109H8;0.604056!10703-109H1;0.914822!10719-109I8;0.138567!10642-109A3;0.375586!10177-103C6;0.307027!10164-103B2;0.669512!10173-103C2;0.764969!10166-103B4;0.637313!10083-102B2;0.921436!10188-103D8;0.884605!10552-107I3;0.617044!10553-107I4;0.571001!10013-101C4;0.141272!10536-107G5;0.242437!10618-108G6;0.722644!10423-106C9;0.810922!10785-110H2;0.398916!12238-129G6;0.898005!12239-129G7;0.37906!12240-129G8;0.13529!10416-106C2;0.748422!10801-110I9;0.00310459!10766-110F1;0.0497061!10824-111C5;0.0887857!10825-111C6;0.121656!10826-111C7;0.125003!10454-106G4;0.0970824!10409-106B4;0.0227099!10638-108I8;0.0702059!10636-108I6;0.640929!10513-107D9;0.437901!10420-106C6;0.500035!10082-102B1;0.259327!10014-101C5;0.0400145!10070-101I7;0.116113!10452-106G2;0.0166572!10453-106G3;0.183404!10449-106F8;0.0278673!10042-101F6;0.0237498!10069-101I6;0.664802!10193-103E4;0.403201!10631-108I1;0.886832!10438-106E6;0.00319892!10488-107B2;0.41854!10196-103E7;0.457748!10071-101I8;0.202957!10071-101I8;0.0595538!10041-101F5;0.946286!10451-106G1;0.247643!10450-106F9;0.33085!10604-108F1;0.257243!10605-108F2;0.849465!10606-108F3;0.54065!10603-108E9;0.994131!10497-107C2;0.64233!10448-106F7;0.285194!10643-109A4;0.370892!10426-106D3;0.271209!10431-106D8;0.162235!10197-103E8;0.361853!10443-106F2;0.332523!10815-111B5;0.778381!10816-111B6;0.432655!10817-111B7;0.678978!10015-101C6;0.552381!10410-106B5;0.177631!10054-101G9;0.270755!10758-110E2;0.338767!10711-109H9;0.249678!10040-101F4;0.177176!10470-106I2;0.897372!10415-106C1;0.110077!10198-103E9;0.192679!10614-108G2;0.103636!10612-108F9;0.712978!10549-107H9;0.786696!10615-108G3;0.569251!10487-107B1;0.770315!10433-106E1;0.422747!10688-109F4;0.724461!10444-106F3;0.375853!10444-106F3;0.748179!10485-107A8;0.769907!10413-106B8;0.591005!10175-103C4;0.687659!10161-103A8;0.804434!12131-128D7;0.745354!10624-108H3;0.592771!10712-109I1;0.0152191!10205-103F7;0.0348274!10206-103F8;0.251005!10207-103F9;0.42322!10050-101G5;0.109796!10051-101G6;0.162598!10016-101C7;0.956409!10046-101G1;0.504529!10778-110G4;0.389511!10633-108I3;0.0609931!10818-111B8;0.399521!10819-111B9;0.560932!10820-111C1;0.709536!10484-107A7;0.575618!10808-111A7;0.564871!10169-103B7;0.00462193!10153-102I9;0.894844!13425-144D5;0.536379!13433-144E4;0.412543!13437-144E8;0.831704!11904-125F5;0.953602!11905-125F6;0.839983!10039-101F3;0.515826!10791-110H8;0.867868!10017-101C8;0.650256!10045-101F9;0.237415!10509-107D5;0.0577826!10839-111E2;0.373887!10692-109F8;0.407527!10079-102A7;0.112479!10078-102A6;0.446751!10721-110A1;0.61841!10569-108B2;0.435228!10570-108B3;0.70611!10571-108B4;0.463163!10647-109A8;0.768787!10752-110D5;0.180106!10782-110G8;0.270826!10726-110A6;0.863156!10018-101C9;0.719016!10086-102B5;0.970687!10182-103D2;0.00501759!10165-103B3;0.494054!10499-107C4;0.675143!10408-106B3;0.510601!10019-101D1;0.0549664!10068-101I5;0.0403376!10075-102A3;0.0914534!10077-102A5;0.0122998!10727-110A7;0.632331!10775-110G1;0.0121648!10412-106B7;0.0128714!12231-129F8;0.760841!12232-129F9;0.169871!12233-129G1;0.0810199!12234-129G2;0.143799!10414-106B9;0.393297!10170-103B8;0.599516!10183-103D3;0.858417!10150-102I6;0.869588!10174-103C3;0.682762!10155-103A2;0.458221!10038-101F2;0.424264!10838-111E1;0.522356!10759-110E3;0.25799!10514-107E1;0.448821!10465-106H6;0.648026!10691-109F7;0.19261!10843-111E6;0.965057!10844-111E7;0.16404!11747-123G1;0.293763!11748-123G2;0.40314!11749-123G3;0.974124!11750-123G4;0.662862!11751-123G5;0.831099!11840-124H4;0.764642!11752-123G6;0.744507!11753-123G7;0.732381!11754-123G8;0.753851!11755-123G9;0.912271!11756-123H1;0.899794!11833-124G6;0.375606!11760-123H5;0.99896!11836-124G9;0.430467!11758-123H3;0.928171!11835-124G8;0.915974!11762-123H7;0.38338!11838-124H2;0.286234!11757-123H2;0.290969!11759-123H4;0.877781!11761-123H6;0.970084!11842-124H6;0.0171606!11837-124H1;0.373309!10568-108B1;0.329375!13230-141I8;0.856437!13231-141I9;0.936661!10696-109G3;0.911833!10493-107B7;0.110716!10494-107B8;0.390568!10850-111F4;0.253714!10851-111F5;0.971428!10852-111F6;0.546631!10853-111F7;0.594034!10854-111F8;0.839842!10855-111F9;0.399883!10856-111G1;0.114457!10847-111F1;0.0966399!10846-111E9;0.481386!10848-111F2;0.766947!10845-111E8;0.794161!10857-111G2;0.831566!10858-111G3;0.873578!10156-103A3;0.439812!11901-125F2;0.719932!11902-125F3;0.189165!11903-125F4;0.270227!10689-109F5;0.253339!10648-109A9;0.875438!10784-110H1;0.745937!10744-110C6;0.754029!10772-110F7;0.00204319!10474-106I6;0.168535!10600-108E6;0.000229479!10684-109E9;0.110976!12226-129F3;0.138426!12227-129F4;0.638195!10508-107D4;0.364867!10539-107G8;0.022384!10607-108F4;0.0947837!10555-107I6;0.292987!10774-110F9;0.0584547!10637-108I7;0.0684515!10663-109C6;0.613173!10728-110A8;0.811768!10729-110A9;0.800058!10430-106D7;0.205011!10730-110B1;0.0922154!10813-111B3;0.161344!10812-111B2;0.00632336!10037-101F1;0.411589!10172-103C1;0.802666!10163-103B1;0.9255!10076-102A4;0.633695!10073-102A1;0.846276!10036-101E9;0.900475!10195-103E6;0.795877!10277-104E7;0.784113!10434-106E2;0.990559!10550-107I1;0.478636!10545-107H5;0.536108!10544-107H4;0.679418!10704-109H2;0.540918!10510-107D6;0.162872!10558-107I9;0.783104!10020-101D2;0.38548!10732-110B3;0.37415!10049-101G4;0.448791!10698-109G5;0.857087!10437-106E5;0.531339!10417-106C3;0.940037!10035-101E8;0.0647948!10171-103B9;0.825286!10157-103A4;0.993907!10034-101E7;0.710839!10072-101I9;0.803347!10199-103F1;0.979903!10200-103F2;0.140552!10697-109G4;0.404644!10723-110A3;0.0888192!10179-103C8;0.00584336!10160-103A7;0.630849!10180-103C9;0.66124!10162-103A9;0.877932!10021-101D3;0.656553!10840-111E3;0.146959!10706-109H4;0.0458607!10033-101E6;0.0197922!10032-101E5;0.795131!10490-107B4;0.886451!10439-106E7;0.814245!10022-101D4;0.365437!10176-103C5;0.181229!10469-106I1;0.882473!10067-101I4;0.230048!10411-106B6;0.0870945!10471-106I3;0.00214282!10030-101E3;0.882174!10475-106I7;0.312098!10787-110H4;0.069856!10477-106I9;0.25926!10695-109G2;0.949595!11771-123I7;0.3161!11772-123I8;0.417327!11773-123I9;0.179114!10093-102C3;0.0110079!10442-106F1;0.1387!10442-106F1;0.077974!10201-103F3;0.155289!10639-108I9;0.169273!11843-124H7;0.0847513!11841-124H5;0.242985!10693-109F9;0.827927!10436-106E4;0.225579!10483-107A6;0.833851!10282-104F3;0.553652!10023-101D5;0.705993!10066-101I3;0.904476!10065-101I2;0.474556!10800-110I8;0.251186!10610-108F7;0.707907!10841-111E4;0.266949!10541-107H1;0.172531!10842-111E5;0.48785!10562-108A4;0.0968618!10024-101D6;0.96447!10064-101I1;0.087245!10609-108F6;0.0994956!10048-101G3;0.965332!10781-110G7;0.364111!10181-103D1;0.935329!10159-103A6;0.513568!10056-101H2;0.522739!10737-110B8;0.282123!10025-101D7;0.0902192!10044-101F8;0.45915!10424-106D1;0.182505!10463-106H4;0.00920674!10616-108G4;0.699244!10486-107A9;0.639539!10062-101H8;0.509746!10202-103F4;0.00436574!10158-103A5;0.26069!10441-106E9;0.541958!10031-101E4;0.811187!10063-101H9;0.751223!10063-101H9;0.931761!11763-123H8;0.353685!11765-123I1;0.482477!11768-123I4;0.488317!10807-111A6;0.689315!10790-110H7;0.375036!10798-110I6;0.528231!10786-110H3;0.53533!10591-108D6;0.951692!10593-108D8;0.310979!10590-108D5;0.729262!10026-101D8;0.549348!10096-102C6;0.414276!10168-103B6;0.8341!10154-103A1;0.915262!10209-103G2;0.712367!10061-101H7;0.281441!10027-101D9;0.154674!10043-101F7;0.481473!10783-110G9;0.156302!10028-101E1;0.596426!10060-101H6;0.190977!10203-103F5;0.0451786!10059-101H5;0.358172!10047-101G2;0.233043!10029-101E2;0.183099!10058-101H4;0.0877897!10418-106C4;0.108263!10492-107B6;0.159789!10694-109G1;0.903957!10797-110I5;0.0549659!10057-101H3;0.783388!10100-102D1;0.189946!10055-101H1;0.284027!10204-103F6;0.0978747!10191-103E2;0.048264!10563-108A5;0.332765
|name=motif_GNCATC
|name=motif_GNCATC
|tomtom_result=YY1#MA0095.1;0;0.00193467;0.920902;1;6;GACATC;GCCATC;+!NFE2L1::MafG#MA0089.1;0;0.00252922;1.20391;1;6;GACATC;GTCATG;-!Gata1#MA0035.1;-1;0.00598109;2.847;1;5;GACATC;CCATCC;-!bZIP911#MA0097.1;6;0.00803312;3.82377;1;6;GACATC;GGCCACGTCATC;-!CREB1#MA0018.1;3;0.019046;9.06592;1;6;GACATC;GACGTCACCAGG;-!GCR1#MA0304.1;0;0.019446;9.25631;1;6;GACATC;GGCTTCCA;-
}}
}}

Latest revision as of 15:03, 7 September 2012

Full Name: motif_GNCATC

Motif matrix
POACGT
0100126400
023160316031603160
0301264000
0412640000
0500012640
0601264000

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
YY1#MA0095.100.001934670.92090216GACATCGCCATC+
NFE2L1::MafG#MA0089.100.002529221.2039116GACATCGTCATG-
Gata1#MA0035.1-10.005981092.84715GACATCCCATCC-
bZIP911#MA0097.160.008033123.8237716GACATCGGCCACGTCATC-
CREB1#MA0018.130.0190469.0659216GACATCGACGTCACCAGG-
GCR1#MA0304.100.0194469.2563116GACATCGGCTTCCA-
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