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MacroAPE 1083:15-CWTCTGACTV: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;0.775;703.7;0.775;69.75!2;320.075;122.45;26.35;305.35!3;0.775;184.45;129.425;460.35!4;251.875;521.575;0.775;0.775!5;230.175;0.775;0.775;543....")
 
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8874!12182-129A4;0.222414!12183-129A5;0.409443!12184-129A6;0.494829!10809-111A8;0.248225!10597-108E3;0.878627!10717-109I6;0.281118!10455-106G5;0.149651!10534-107G3;0.00127414!10429-106D6;0.000226762!10464-106H5;0.00043329!10827-111C8;0.00433724!10789-110H6;0.000520393!10828-111C9;0.00291012!10788-110H5;0.00415066!10792-110H9;0.000630857!10765-110E9;0.0204306!10829-111D1;0.00027032!10830-111D2;1.68078e-05!10831-111D3;0.00244177!10832-111D4;0.000483816!10833-111D5;0.000970576!10764-110E8;5.86586e-05!10770-110F5;0.00885379!10399-106A3;0.000132478!10400-106A4;0.000162992!10405-106A9;0.000536411!10834-111D6;0.000184138!10835-111D7;0.00095872!10836-111D8;3.23779e-05!10837-111D9;0.00172966!10699-109G6;0.000156274!10802-111A1;0.00155254!10796-110I4;0.00319304!10010-101C1;0.187506!10810-111A9;0.000672534!10421-106C7;0.0518102!10708-109H6;0.00436795!12235-129G3;0.734525!12236-129G4;0.16784!12237-129G5;0.929952!10167-103B5;0.603311!10151-102I7;0.0294685!10428-106D5;0.0279017!10795-110I3;0.92996!10805-111A4;0.0098167!10052-101G7;0.449788!10189-103D9;0.0158297!10589-108D4;0.190794!10425-106D2;0.061989!10427-106D4;0.32389!10702-109G9;0.0137157!10432-106D9;0.0505968!10496-107C1;0.117824!10718-109I7;0.761842!10011-101C2;0.000317331!10053-101G8;0.011701!10686-109F2;0.430839!10084-102B3;0.46423!10012-101C3;0.0226086!10085-102B4;0.0151543!10482-107A5;0.0812545!10419-106C5;0.302344!10080-102A8;0.167028!10760-110E4;0.007877!10709-109H7;0.0824646!10710-109H8;0.0141573!10703-109H1;0.897443!10719-109I8;0.610254!10642-109A3;0.24288!10177-103C6;0.80782!10164-103B2;0.0991503!10173-103C2;0.0806331!10166-103B4;0.166875!10083-102B2;0.128947!10188-103D8;0.104318!10552-107I3;0.0491425!10553-107I4;0.022149!10013-101C4;0.755701!10536-107G5;0.0808102!10618-108G6;0.329329!10423-106C9;0.176208!10785-110H2;0.0518095!12238-129G6;0.0854729!12239-129G7;0.0365183!12240-129G8;0.132411!10416-106C2;0.0672096!10801-110I9;0.000379322!10766-110F1;0.00144006!10824-111C5;0.000573787!10825-111C6;0.0932405!10826-111C7;0.0737093!10454-106G4;0.114062!10409-106B4;0.00664531!10638-108I8;3.63657e-05!10636-108I6;0.0393011!10513-107D9;0.142397!10420-106C6;0.436298!10082-102B1;0.0155274!10014-101C5;0.145626!10070-101I7;0.0223402!10452-106G2;0.0181009!10453-106G3;0.0890107!10449-106F8;0.0137069!10042-101F6;0.0119028!10069-101I6;0.0122382!10193-103E4;0.182335!10631-108I1;0.0574234!10438-106E6;1.34376e-06!10488-107B2;0.152699!10196-103E7;0.941483!10071-101I8;0.103348!10071-101I8;0.18723!10041-101F5;0.0794013!10451-106G1;0.0171481!10450-106F9;0.0315095!10604-108F1;0.169904!10605-108F2;0.47146!10606-108F3;0.238916!10603-108E9;0.429549!10497-107C2;0.504644!10448-106F7;0.602999!10643-109A4;0.599221!10426-106D3;0.00435232!10431-106D8;0.0160299!10197-103E8;0.198212!10443-106F2;0.0342626!10815-111B5;0.463327!10816-111B6;0.0284406!10817-111B7;0.038234!10015-101C6;0.0496126!10410-106B5;0.0116709!10054-101G9;0.730567!10758-110E2;0.0694353!10711-109H9;0.829736!10040-101F4;0.259283!10470-106I2;0.0338403!10415-106C1;0.225177!10198-103E9;0.927652!10614-108G2;0.0402199!10612-108F9;0.585466!10549-107H9;0.33044!10615-108G3;0.433981!10487-107B1;0.795498!10433-106E1;0.0451723!10688-109F4;0.902835!10444-106F3;0.140875!10444-106F3;0.0131912!10485-107A8;0.0224309!10413-106B8;0.770295!10175-103C4;0.267681!10161-103A8;0.0549751!12131-128D7;0.014975!10624-108H3;0.0172778!10712-109I1;0.0137354!10205-103F7;3.15212e-05!10206-103F8;0.0215009!10207-103F9;0.0251775!10050-101G5;0.0156068!10051-101G6;0.127791!10016-101C7;0.162257!10046-101G1;0.0976992!10778-110G4;0.101061!10633-108I3;0.0269742!10818-111B8;0.946673!10819-111B9;0.173467!10820-111C1;0.194796!10484-107A7;0.133973!10808-111A7;0.3759!10169-103B7;1.67771e-06!10153-102I9;0.0368217!13425-144D5;0.0236478!13433-144E4;0.00914731!13437-144E8;0.00332514!11904-125F5;0.00281743!11905-125F6;0.0514126!10039-101F3;0.0983297!10791-110H8;0.0346436!10017-101C8;0.235746!10045-101F9;0.0177629!10509-107D5;0.103754!10839-111E2;0.242169!10692-109F8;0.634063!10079-102A7;0.467478!10078-102A6;0.0396743!10721-110A1;0.261851!10569-108B2;0.0180823!10570-108B3;0.00191338!10571-108B4;0.0199001!10647-109A8;0.002388!10752-110D5;0.585216!10782-110G8;0.00805255!10726-110A6;0.417616!10018-101C9;0.066066!10086-102B5;0.199342!10182-103D2;0.638626!10165-103B3;0.00663362!10499-107C4;0.00999685!10408-106B3;0.844554!10019-101D1;0.135108!10068-101I5;0.207532!10075-102A3;0.832687!10077-102A5;0.663501!10727-110A7;0.506603!10775-110G1;1.21191e-05!10412-106B7;6.30008e-05!12231-129F8;0.385739!12232-129F9;0.00638882!12233-129G1;0.0617253!12234-129G2;0.0330303!10414-106B9;0.0234907!10170-103B8;0.21864!10183-103D3;0.0215099!10150-102I6;0.0404789!10174-103C3;0.029249!10155-103A2;0.0194282!10038-101F2;0.00974435!10838-111E1;0.0059412!10759-110E3;0.00481899!10514-107E1;0.0213413!10465-106H6;0.742788!10691-109F7;0.410657!10843-111E6;0.250277!10844-111E7;0.0326532!11747-123G1;0.360221!11748-123G2;0.859168!11749-123G3;0.025329!11750-123G4;0.369266!11751-123G5;0.00105148!11840-124H4;4.34581e-05!11752-123G6;0.00216148!11753-123G7;0.0312478!11754-123G8;0.00523141!11755-123G9;0.321525!11756-123H1;0.224709!11833-124G6;0.291636!11760-123H5;0.00378582!11836-124G9;0.523404!11758-123H3;0.717426!11835-124G8;0.131361!11762-123H7;0.0331002!11838-124H2;0.00113034!11757-123H2;0.000645483!11759-123H4;0.120342!11761-123H6;0.705833!11842-124H6;0.0438462!11837-124H1;0.00161673!10568-108B1;0.00222388!13230-141I8;0.649529!13231-141I9;0.0224449!10696-109G3;0.102521!10493-107B7;0.0149279!10494-107B8;0.385193!10850-111F4;0.987982!10851-111F5;0.654519!10852-111F6;0.565843!10853-111F7;0.885354!10854-111F8;0.605798!10855-111F9;0.708857!10856-111G1;0.298865!10847-111F1;0.237754!10846-111E9;0.0468519!10848-111F2;0.951695!10845-111E8;0.796726!10857-111G2;0.548486!10858-111G3;0.31024!10156-103A3;0.00414185!11901-125F2;0.0405063!11902-125F3;0.0507914!11903-125F4;0.00498425!10689-109F5;0.0041142!10648-109A9;0.643865!10784-110H1;0.34494!10744-110C6;0.574046!10772-110F7;0.021565!10474-106I6;0.000171593!10600-108E6;0.0600916!10684-109E9;0.709611!12226-129F3;0.836262!12227-129F4;0.442883!10508-107D4;0.0371326!10539-107G8;0.454083!10607-108F4;0.397558!10555-107I6;0.0670661!10774-110F9;0.852828!10637-108I7;0.00521086!10663-109C6;0.123252!10728-110A8;0.0971838!10729-110A9;0.0184888!10430-106D7;0.31221!10730-110B1;0.00922768!10813-111B3;0.699558!10812-111B2;0.642024!10037-101F1;0.274225!10172-103C1;0.0354687!10163-103B1;0.0682279!10076-102A4;0.0333323!10073-102A1;0.0501697!10036-101E9;0.127575!10195-103E6;0.0294829!10277-104E7;0.0274901!10434-106E2;0.0249065!10550-107I1;0.00243302!10545-107H5;0.0332542!10544-107H4;0.122075!10704-109H2;0.0924031!10510-107D6;0.0176892!10558-107I9;0.616849!10020-101D2;0.520648!10732-110B3;0.0614723!10049-101G4;0.945166!10698-109G5;0.619266!10437-106E5;0.183518!10417-106C3;0.596151!10035-101E8;0.848948!10171-103B9;0.0204016!10157-103A4;0.0172873!10034-101E7;0.0371545!10072-101I9;0.0188339!10199-103F1;0.249922!10200-103F2;0.919955!10697-109G4;0.0310681!10723-110A3;0.926442!10179-103C8;0.547462!10160-103A7;0.166832!10180-103C9;0.334519!10162-103A9;0.0871255!10021-101D3;0.0764953!10840-111E3;0.00542975!10706-109H4;0.00206817!10033-101E6;0.376633!10032-101E5;0.00645294!10490-107B4;0.025127!10439-106E7;0.223409!10022-101D4;0.0468783!10176-103C5;0.00687809!10469-106I1;0.12714!10067-101I4;0.878986!10411-106B6;0.138818!10471-106I3;0.794834!10030-101E3;0.725848!10475-106I7;0.0286706!10787-110H4;0.0138587!10477-106I9;0.0690804!10695-109G2;0.0428823!11771-123I7;0.237557!11772-123I8;0.199357!11773-123I9;0.933216!10093-102C3;0.403985!10442-106F1;0.39434!10442-106F1;0.000364048!10201-103F3;0.000242034!10639-108I9;0.164421!11843-124H7;0.681083!11841-124H5;0.880882!10693-109F9;0.102772!10436-106E4;0.811284!10483-107A6;0.51075!10282-104F3;0.355464!10023-101D5;0.220087!10066-101I3;0.0210149!10065-101I2;0.239005!10800-110I8;0.0613616!10610-108F7;0.602425!10841-111E4;0.764718!10541-107H1;0.0404375!10842-111E5;0.100156!10562-108A4;0.0764679!10024-101D6;0.799646!10064-101I1;0.0266504!10609-108F6;0.038164!10048-101G3;0.582812!10781-110G7;0.0261893!10181-103D1;0.167164!10159-103A6;0.00711208!10056-101H2;0.00152585!10737-110B8;0.0475536!10025-101D7;0.227909!10044-101F8;0.725111!10424-106D1;0.933505!10463-106H4;0.0029922!10616-108G4;0.0271528!10486-107A9;0.0350942!10062-101H8;0.65776!10202-103F4;0.0547872!10158-103A5;0.295602!10441-106E9;0.00388648!10031-101E4;0.0196376!10063-101H9;0.0283504!10063-101H9;0.108372!11763-123H8;0.102399!11765-123I1;0.0738602!11768-123I4;0.00125886!10807-111A6;0.148337!10790-110H7;0.0111417!10798-110I6;0.0291214!10786-110H3;0.00404862!10591-108D6;0.205637!10593-108D8;0.00590743!10590-108D5;0.834964!10026-101D8;0.000392841!10096-102C6;0.0610766!10168-103B6;0.283722!10154-103A1;0.0219278!10209-103G2;0.0219695!10061-101H7;0.116271!10027-101D9;0.24084!10043-101F7;0.000155447!10783-110G9;0.0521767!10028-101E1;0.234098!10060-101H6;0.0134283!10203-103F5;0.163592!10059-101H5;0.0683673!10047-101G2;0.110965!10029-101E2;0.188881!10058-101H4;0.0303723!10418-106C4;0.111179!10492-107B6;0.0116355!10694-109G1;0.283589!10797-110I5;0.789014!10057-101H3;0.446636!10100-102D1;0.00728034!10055-101H1;0.0717162!10204-103F6;0.619572!10191-103E2;0.00521819!10563-108A5;0.0880762
|name=15-CWTCTGACTV,CNhs10852,BestGuess:MAFG_si_HM09(0.740487223186701),T:775.0(10.29%),B:2472.4(5.98%),P:1e-46
|name=15-CWTCTGACTV,CNhs10852,BestGuess:MAFG_si_HM09(0.740487223186701),T:775.0(10.29%),B:2472.4(5.98%),P:1e-46
|tomtom_result=BAS1#MA0278.1;2;0.00271864;1.29407;1;10;CATCTGACTG;TTGACTTGACTCTGGCTGTGC;-!AP1#MA0099.2;-4;0.00299571;1.42596;1;6;CATCTGACTG;TGACTCA;+!Mafb#MA0117.1;-2;0.00777429;3.70056;1;8;CATCTGACTG;GCTGACGG;+!ARG80#MA0271.1;-4;0.00795296;3.78561;1;6;CATCTGACTG;AGACGC;+!ARG81#MA0272.1;-3;0.00873648;4.15857;1;7;CATCTGACTG;GTGACTCT;+!HAP4#MA0315.1;3;0.0109573;5.21565;1;10;CATCTGACTG;TCGCCTCTGATTGGT;-!NFE2L1::MafG#MA0089.1;-2;0.0116631;5.55163;1;6;CATCTGACTG;CATGAC;+!GCN4#MA0303.1;3;0.0137245;6.53284;1;10;CATCTGACTG;TGAAGTATGACTCATCCCTTG;-!HAP5#MA0316.1;3;0.0141539;6.73727;1;10;CATCTGACTG;TGGGATCTGATTGGT;+!Fos#MA0099.1;-4;0.0152723;7.26962;1;6;CATCTGACTG;TGACTCAC;-!YAP7#MA0419.1;-1;0.0173861;8.27581;1;9;CATCTGACTG;TGCTTACTAAT;-!vis#MA0252.1;-4;0.01989;9.46763;1;6;CATCTGACTG;TGACAG;+
}}
}}

Latest revision as of 15:01, 7 September 2012

Full Name: 15-CWTCTGACTV,CNhs10852,BestGuess:MAFG_si_HM09(0.740487223186701),T:775.0(10.29%),B:2472.4(5.98%),P:1e-46

Motif matrix
POACGT
10.775703.70.77569.75
2320.075122.4526.35305.35
30.775184.45129.425460.35
4251.875521.5750.7750.775
5230.1750.7750.775543.275
60.7750.775772.6750.775
7772.6750.7750.7750.775
80.775772.6750.7750.775
90.77511.62511.625750.975
10219.325255.75299.150.775

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
BAS1#MA0278.120.002718641.29407110CATCTGACTGTTGACTTGACTCTGGCTGTGC-
AP1#MA0099.2-40.002995711.4259616CATCTGACTGTGACTCA+
Mafb#MA0117.1-20.007774293.7005618CATCTGACTGGCTGACGG+
ARG80#MA0271.1-40.007952963.7856116CATCTGACTGAGACGC+
ARG81#MA0272.1-30.008736484.1585717CATCTGACTGGTGACTCT+
HAP4#MA0315.130.01095735.21565110CATCTGACTGTCGCCTCTGATTGGT-
NFE2L1::MafG#MA0089.1-20.01166315.5516316CATCTGACTGCATGAC+
GCN4#MA0303.130.01372456.53284110CATCTGACTGTGAAGTATGACTCATCCCTTG-
HAP5#MA0316.130.01415396.73727110CATCTGACTGTGGGATCTGATTGGT+
Fos#MA0099.1-40.01527237.2696216CATCTGACTGTGACTCAC-
YAP7#MA0419.1-10.01738618.2758119CATCTGACTGTGCTTACTAAT-
vis#MA0252.1-40.019899.4676316CATCTGACTGTGACAG+
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