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MacroAPE 1083:CNhs13549 bu f2: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;37.827973847398;3860.589057780671;37.827973847398;1709.6721837840619!2;11.760859990499842;1625.1163903948084;11.760859990499842;3997.2790788...")
 
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106G5;0.0365621!10534-107G3;0.268958!10429-106D6;0.133002!10464-106H5;0.0826011!10827-111C8;0.127006!10789-110H6;0.800917!10828-111C9;0.472518!10788-110H5;0.57915!10792-110H9;0.330569!10765-110E9;0.621894!10829-111D1;0.614896!10830-111D2;0.480587!10831-111D3;0.163595!10832-111D4;0.454764!10833-111D5;0.243553!10764-110E8;0.324891!10770-110F5;0.357514!10399-106A3;0.635239!10400-106A4;0.325372!10405-106A9;0.325908!10834-111D6;0.290897!10835-111D7;0.541274!10836-111D8;0.31732!10837-111D9;0.374366!10699-109G6;0.542326!10802-111A1;0.246945!10796-110I4;0.193435!10010-101C1;0.141014!10810-111A9;0.0293672!10421-106C7;0.0778171!10708-109H6;0.45719!12235-129G3;0.0262297!12236-129G4;0.604812!12237-129G5;0.770688!10167-103B5;0.998054!10151-102I7;0.43935!10428-106D5;0.418501!10795-110I3;0.0394589!10805-111A4;0.191805!10052-101G7;0.025788!10189-103D9;0.0578047!10589-108D4;0.0181092!10425-106D2;0.0925489!10427-106D4;0.049973!10702-109G9;0.106177!10432-106D9;0.183178!10496-107C1;0.0274307!10718-109I7;0.243671!10011-101C2;0.507232!10053-101G8;0.0610486!10686-109F2;0.333385!10084-102B3;0.959107!10012-101C3;0.268582!10085-102B4;0.27357!10482-107A5;0.819516!10419-106C5;0.00793286!10080-102A8;0.00568328!10760-110E4;0.204362!10709-109H7;0.0691734!10710-109H8;0.0967872!10703-109H1;0.0893686!10719-109I8;0.0954618!10642-109A3;0.0871157!10177-103C6;0.0424482!10164-103B2;0.262463!10173-103C2;0.333669!10166-103B4;0.709926!10083-102B2;0.638463!10188-103D8;0.597894!10552-107I3;0.292479!10553-107I4;0.245304!10013-101C4;0.00976629!10536-107G5;0.0707644!10618-108G6;0.0557316!10423-106C9;0.0394493!10785-110H2;0.0243642!12238-129G6;0.00869379!12239-129G7;0.137689!12240-129G8;0.499557!10416-106C2;0.0947086!10801-110I9;0.293474!10766-110F1;0.416704!10824-111C5;0.514618!10825-111C6;0.253052!10826-111C7;0.256703!10454-106G4;0.2567!10409-106B4;0.201761!10638-108I8;0.4334!10636-108I6;0.0174212!10513-107D9;0.0320676!10420-106C6;0.0339142!10082-102B1;0.0130199!10014-101C5;0.0728002!10070-101I7;0.0389396!10452-106G2;0.0929893!10453-106G3;0.0572818!10449-106F8;0.0892907!10042-101F6;0.0932592!10069-101I6;0.186047!10193-103E4;0.0973414!10631-108I1;0.250766!10438-106E6;0.184417!10488-107B2;0.0367234!10196-103E7;0.0414531!10071-101I8;0.146566!10071-101I8;0.0790768!10041-101F5;0.984729!10451-106G1;0.038496!10450-106F9;0.0139333!10604-108F1;0.0118152!10605-108F2;0.0416957!10606-108F3;0.140528!10603-108E9;0.0576666!10497-107C2;0.0796826!10448-106F7;0.0706979!10643-109A4;0.102654!10426-106D3;0.0178594!10431-106D8;0.0695371!10197-103E8;0.0127869!10443-106F2;0.0473512!10815-111B5;0.0920645!10816-111B6;0.213215!10817-111B7;0.148124!10015-101C6;0.188821!10410-106B5;0.0431299!10054-101G9;0.0652785!10758-110E2;0.0954874!10711-109H9;0.261751!10040-101F4;0.155605!10470-106I2;0.454965!10415-106C1;0.0675612!10198-103E9;0.334094!10614-108G2;0.0445021!10612-108F9;0.0310876!10549-107H9;0.00501819!10615-108G3;0.0623182!10487-107B1;0.0618984!10433-106E1;0.216848!10688-109F4;0.0799582!10444-106F3;0.179522!10444-106F3;0.372973!10485-107A8;0.374831!10413-106B8;0.11129!10175-103C4;0.0759235!10161-103A8;0.24762!12131-128D7;0.209157!10624-108H3;0.0977008!10712-109I1;0.191998!10205-103F7;0.189958!10206-103F8;0.0564173!10207-103F9;0.0690573!10050-101G5;0.078442!10051-101G6;0.129281!10016-101C7;0.0727212!10046-101G1;0.0641095!10778-110G4;0.106519!10633-108I3;0.343923!10818-111B8;0.0216706!10819-111B9;0.146279!10820-111C1;0.135431!10484-107A7;0.147432!10808-111A7;0.00423578!10169-103B7;0.327661!10153-102I9;0.35338!13425-144D5;0.333066!13433-144E4;0.00809429!13437-144E8;0.00606367!11904-125F5;0.0107113!11905-125F6;0.21012!10039-101F3;0.0846914!10791-110H8;0.425475!10017-101C8;0.0499094!10045-101F9;0.124288!10509-107D5;0.26305!10839-111E2;0.0765455!10692-109F8;0.30719!10079-102A7;0.00307223!10078-102A6;0.025251!10721-110A1;0.0602616!10569-108B2;0.0381063!10570-108B3;0.125479!10571-108B4;0.207614!10647-109A8;0.0995761!10752-110D5;0.0513331!10782-110G8;0.189305!10726-110A6;0.610976!10018-101C9;0.0210461!10086-102B5;0.023737!10182-103D2;0.0150386!10165-103B3;0.228426!10499-107C4;0.197513!10408-106B3;0.0913309!10019-101D1;0.271324!10068-101I5;0.0431317!10075-102A3;0.104942!10077-102A5;0.0366837!10727-110A7;0.00509369!10775-110G1;0.135985!10412-106B7;0.221332!12231-129F8;0.133716!12232-129F9;0.380302!12233-129G1;0.196812!12234-129G2;0.206463!10414-106B9;0.600996!10170-103B8;0.0344989!10183-103D3;0.471146!10150-102I6;0.392053!10174-103C3;0.374474!10155-103A2;0.103579!10038-101F2;0.14314!10838-111E1;0.134649!10759-110E3;0.0175693!10514-107E1;0.0195122!10465-106H6;0.0425369!10691-109F7;0.107399!10843-111E6;0.760835!10844-111E7;0.03992!11747-123G1;0.034732!11748-123G2;0.506876!11749-123G3;0.51893!11750-123G4;0.0528578!11751-123G5;0.321308!11840-124H4;0.167305!11752-123G6;0.0368915!11753-123G7;0.448794!11754-123G8;0.270902!11755-123G9;0.535398!11756-123H1;0.83722!11833-124G6;0.427806!11760-123H5;0.771849!11836-124G9;0.470304!11758-123H3;0.0614351!11835-124G8;0.313646!11762-123H7;0.155441!11838-124H2;0.115466!11757-123H2;0.173041!11759-123H4;0.55007!11761-123H6;0.669984!11842-124H6;0.950231!11837-124H1;0.408277!10568-108B1;0.27957!13230-141I8;0.624424!13231-141I9;0.0267295!10696-109G3;0.0437256!10493-107B7;0.826525!10494-107B8;0.117409!10850-111F4;0.0320814!10851-111F5;0.0869619!10852-111F6;0.345801!10853-111F7;0.167336!10854-111F8;0.0627488!10855-111F9;0.019176!10856-111G1;0.644985!10847-111F1;0.0634213!10846-111E9;0.04756!10848-111F2;0.0128836!10845-111E8;0.195281!10857-111G2;0.067241!10858-111G3;0.252089!10156-103A3;0.0880538!11901-125F2;0.36511!11902-125F3;0.480155!11903-125F4;0.273727!10689-109F5;0.304673!10648-109A9;0.0137328!10784-110H1;0.123456!10744-110C6;0.0217687!10772-110F7;0.235437!10474-106I6;0.26854!10600-108E6;0.605023!10684-109E9;0.0340495!12226-129F3;0.208426!12227-129F4;0.138099!10508-107D4;0.615418!10539-107G8;0.0398458!10607-108F4;0.0662452!10555-107I6;0.113439!10774-110F9;0.0785182!10637-108I7;0.0633692!10663-109C6;0.142674!10728-110A8;0.027898!10729-110A9;0.0175785!10430-106D7;0.265764!10730-110B1;0.0300275!10813-111B3;0.0896908!10812-111B2;0.615683!10037-101F1;0.290268!10172-103C1;0.361409!10163-103B1;0.570133!10076-102A4;0.390709!10073-102A1;0.463384!10036-101E9;0.701393!10195-103E6;0.430354!10277-104E7;0.373852!10434-106E2;0.348076!10550-107I1;0.0243044!10545-107H5;0.0142022!10544-107H4;0.108208!10704-109H2;0.00940501!10510-107D6;0.242494!10558-107I9;0.0163741!10020-101D2;0.0317277!10732-110B3;0.0750877!10049-101G4;0.275262!10698-109G5;0.231664!10437-106E5;0.0796864!10417-106C3;0.0371092!10035-101E8;0.170622!10171-103B9;0.431031!10157-103A4;0.453938!10034-101E7;0.374306!10072-101I9;0.426843!10199-103F1;0.840711!10200-103F2;0.0338219!10697-109G4;0.0450848!10723-110A3;0.136825!10179-103C8;0.00747767!10160-103A7;0.333999!10180-103C9;0.280924!10162-103A9;0.399189!10021-101D3;0.485231!10840-111E3;0.0982478!10706-109H4;0.215929!10033-101E6;0.760462!10032-101E5;0.250403!10490-107B4;0.403308!10439-106E7;0.0282003!10022-101D4;0.0265564!10176-103C5;0.0646518!10469-106I1;0.395335!10067-101I4;0.0179449!10411-106B6;0.198643!10471-106I3;0.231245!10030-101E3;0.250495!10475-106I7;0.119552!10787-110H4;0.03807!10477-106I9;0.0804331!10695-109G2;0.0463446!11771-123I7;0.901415!11772-123I8;0.0330096!11773-123I9;0.597449!10093-102C3;0.595684!10442-106F1;0.0477646!10442-106F1;0.274204!10201-103F3;0.242789!10639-108I9;0.108476!11843-124H7;9.98476e-05!11841-124H5;0.156658!10693-109F9;0.136396!10436-106E4;0.00277549!10483-107A6;0.244503!10282-104F3;0.156106!10023-101D5;0.104729!10066-101I3;0.0620002!10065-101I2;0.0474616!10800-110I8;0.0756883!10610-108F7;0.0113904!10841-111E4;0.0391431!10541-107H1;0.0635939!10842-111E5;0.0197939!10562-108A4;0.0365!10024-101D6;0.138452!10064-101I1;0.033729!10609-108F6;0.0397528!10048-101G3;0.0704998!10781-110G7;0.0885316!10181-103D1;0.0523846!10159-103A6;0.119958!10056-101H2;0.100358!10737-110B8;0.173146!10025-101D7;0.508531!10044-101F8;0.00892971!10424-106D1;0.0202749!10463-106H4;0.175441!10616-108G4;0.044418!10486-107A9;0.111247!10062-101H8;0.129689!10202-103F4;0.153714!10158-103A5;0.0420498!10441-106E9;0.104515!10031-101E4;0.00716618!10063-101H9;0.365984!10063-101H9;0.850155!11763-123H8;0.0446097!11765-123I1;0.0450087!11768-123I4;0.0575075!10807-111A6;0.0156829!10790-110H7;0.0188211!10798-110I6;0.0676232!10786-110H3;0.130148!10591-108D6;0.00714754!10593-108D8;0.0421389!10590-108D5;0.0154027!10026-101D8;0.0380789!10096-102C6;0.0618535!10168-103B6;0.826022!10154-103A1;0.195892!10209-103G2;0.217768!10061-101H7;0.0379819!10027-101D9;0.0771372!10043-101F7;0.748173!10783-110G9;0.06206!10028-101E1;0.0343015!10060-101H6;0.15087!10203-103F5;0.211698!10059-101H5;0.0549184!10047-101G2;0.0722243!10029-101E2;0.0223229!10058-101H4;0.0270828!10418-106C4;0.0785974!10492-107B6;0.0279262!10694-109G1;0.0470962!10797-110I5;0.294937!10057-101H3;0.0226607!10100-102D1;0.0475201!10055-101H1;0.117996!10204-103F6;0.18396!10191-103E2;0.144797!10563-108A5;0.0201993
|name=CNhs13549_bu_f2
|name=CNhs13549_bu_f2
|tomtom_result=REI1#MA0364.1;1;0.00841332;4.00474;1;6;CTCTGGG;CCCCTGA;+!RUNX1#MA0002.2;0;0.0204698;9.74363;1;7;CTCTGGG;GTCTGTGGTTT;+!SIP4#MA0380.1;0;0.0207648;9.88404;1;7;CTCTGGG;CTCCGGA;+
}}
}}

Latest revision as of 14:54, 7 September 2012

Full Name: CNhs13549_bu_f2

Motif matrix
POACGT
137.8279738473983860.58905778067137.8279738473981709.6721837840619
211.7608599904998421625.116390394808411.7608599904998423997.2790788837056
30.05645.9171892595370.00.0
40.00.00.05645.917189259537
511.79545308822992811.7954530882299285610.53082999484611.795453088229928
61373.40342250766931089.00963659879741869.17641960074981314.3277105522934
7721.60113958562491364.76832047306632401.64643630451251157.9012928962995

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
REI1#MA0364.110.008413324.0047416CTCTGGGCCCCTGA+
RUNX1#MA0002.200.02046989.7436317CTCTGGGGTCTGTGGTTT+
SIP4#MA0380.100.02076489.8840417CTCTGGGCTCCGGA+
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