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MacroAPE 1083:PO3F2 si: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;35.3972868217055;14.738372093023303;4.345930232558149;10.51841085271322!2;27.209302325581458;0.0;2.3934108527131825;35.3972868217055!3;25.31...")
 
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59!10827-111C8;0.392712!10789-110H6;0.370435!10828-111C9;0.894862!10788-110H5;0.455743!10792-110H9;0.937043!10765-110E9;0.79097!10829-111D1;0.593485!10830-111D2;0.889446!10831-111D3;0.872328!10832-111D4;0.486903!10833-111D5;0.223559!10764-110E8;0.0513707!10770-110F5;0.631225!10399-106A3;0.817818!10400-106A4;0.561252!10405-106A9;0.614778!10834-111D6;0.591791!10835-111D7;0.390751!10836-111D8;0.907306!10837-111D9;0.112931!10699-109G6;0.273458!10802-111A1;0.856544!10796-110I4;0.440599!10010-101C1;0.544147!10810-111A9;0.842147!10421-106C7;0.527241!10708-109H6;0.726508!12235-129G3;0.573741!12236-129G4;0.990123!12237-129G5;0.0188961!10167-103B5;0.705111!10151-102I7;0.01657!10428-106D5;0.00489674!10795-110I3;0.764124!10805-111A4;0.0972939!10052-101G7;0.0912957!10189-103D9;0.665578!10589-108D4;0.87513!10425-106D2;0.336129!10427-106D4;0.960976!10702-109G9;0.714908!10432-106D9;0.727608!10496-107C1;0.779437!10718-109I7;0.90637!10011-101C2;0.532262!10053-101G8;0.811262!10686-109F2;0.807103!10084-102B3;0.688731!10012-101C3;0.000200228!10085-102B4;0.0222632!10482-107A5;0.0704474!10419-106C5;0.184652!10080-102A8;0.758767!10760-110E4;0.120608!10709-109H7;0.438755!10710-109H8;0.758278!10703-109H1;0.522044!10719-109I8;0.128529!10642-109A3;0.212864!10177-103C6;0.282688!10164-103B2;0.0665736!10173-103C2;0.00884434!10166-103B4;0.00219064!10083-102B2;0.0257241!10188-103D8;0.011815!10552-107I3;0.0308764!10553-107I4;0.248921!10013-101C4;0.0405886!10536-107G5;0.352899!10618-108G6;0.77009!10423-106C9;0.921256!10785-110H2;0.391651!12238-129G6;0.523754!12239-129G7;0.416364!12240-129G8;0.0478918!10416-106C2;0.0996133!10801-110I9;0.334896!10766-110F1;0.129557!10824-111C5;0.846435!10825-111C6;0.12825!10826-111C7;0.195082!10454-106G4;0.199488!10409-106B4;0.740711!10638-108I8;0.509296!10636-108I6;0.943466!10513-107D9;0.814617!10420-106C6;0.920357!10082-102B1;0.510102!10014-101C5;0.73513!10070-101I7;0.526863!10452-106G2;0.694846!10453-106G3;0.380112!10449-106F8;0.0778321!10042-101F6;0.0622173!10069-101I6;0.00428829!10193-103E4;0.91658!10631-108I1;0.00950553!10438-106E6;0.312345!10488-107B2;0.154182!10196-103E7;0.73338!10071-101I8;0.286561!10071-101I8;0.606371!10041-101F5;0.200352!10451-106G1;0.976694!10450-106F9;0.940344!10604-108F1;0.728907!10605-108F2;0.150538!10606-108F3;0.523027!10603-108E9;0.31643!10497-107C2;0.242655!10448-106F7;0.773065!10643-109A4;0.182365!10426-106D3;0.963956!10431-106D8;0.874793!10197-103E8;0.327096!10443-106F2;0.375008!10815-111B5;0.340774!10816-111B6;0.354998!10817-111B7;0.572007!10015-101C6;0.332886!10410-106B5;0.928531!10054-101G9;0.817972!10758-110E2;0.510549!10711-109H9;0.956966!10040-101F4;0.397146!10470-106I2;0.0101327!10415-106C1;0.41192!10198-103E9;0.669249!10614-108G2;0.531027!10612-108F9;0.871872!10549-107H9;0.292129!10615-108G3;0.409361!10487-107B1;0.180264!10433-106E1;0.750732!10688-109F4;0.37512!10444-106F3;0.907387!10444-106F3;0.737265!10485-107A8;0.582687!10413-106B8;0.345404!10175-103C4;0.175763!10161-103A8;0.011449!12131-128D7;0.0104462!10624-108H3;0.507336!10712-109I1;0.0645061!10205-103F7;0.797369!10206-103F8;0.9!10207-103F9;0.839529!10050-101G5;0.785334!10051-101G6;0.637811!10016-101C7;0.669102!10046-101G1;0.932977!10778-110G4;0.960544!10633-108I3;0.0467765!10818-111B8;0.2219!10819-111B9;0.496497!10820-111C1;0.516845!10484-107A7;0.603356!10808-111A7;0.0789037!10169-103B7;0.950111!10153-102I9;0.0672189!13425-144D5;0.00892674!13433-144E4;0.0631621!13437-144E8;0.154082!11904-125F5;0.158789!11905-125F6;0.51292!10039-101F3;0.0902422!10791-110H8;0.00434829!10017-101C8;0.705906!10045-101F9;0.181854!10509-107D5;0.792047!10839-111E2;0.261015!10692-109F8;0.604959!10079-102A7;0.997497!10078-102A6;0.63211!10721-110A1;0.585344!10569-108B2;0.383634!10570-108B3;0.0570047!10571-108B4;0.279692!10647-109A8;0.123914!10752-110D5;0.27746!10782-110G8;0.1116!10726-110A6;0.307268!10018-101C9;0.795558!10086-102B5;0.504234!10182-103D2;0.958585!10165-103B3;0.000791264!10499-107C4;0.00428177!10408-106B3;0.19556!10019-101D1;0.646033!10068-101I5;0.122699!10075-102A3;0.673334!10077-102A5;0.232882!10727-110A7;0.867663!10775-110G1;0.858055!10412-106B7;0.251306!12231-129F8;0.817828!12232-129F9;0.6713!12233-129G1;0.600946!12234-129G2;0.731417!10414-106B9;0.430046!10170-103B8;0.729202!10183-103D3;0.0189757!10150-102I6;0.0186166!10174-103C3;0.00531612!10155-103A2;0.0223761!10038-101F2;0.0125364!10838-111E1;0.00119518!10759-110E3;0.88166!10514-107E1;0.958036!10465-106H6;0.357777!10691-109F7;0.147457!10843-111E6;0.30299!10844-111E7;0.7678!11747-123G1;0.434976!11748-123G2;0.12394!11749-123G3;0.117259!11750-123G4;0.172871!11751-123G5;0.0725605!11840-124H4;0.13391!11752-123G6;0.286475!11753-123G7;0.172179!11754-123G8;0.356887!11755-123G9;0.052873!11756-123H1;0.234223!11833-124G6;0.111364!11760-123H5;0.879692!11836-124G9;0.134763!11758-123H3;0.152377!11835-124G8;0.0915026!11762-123H7;0.187403!11838-124H2;0.491084!11757-123H2;0.288114!11759-123H4;0.081255!11761-123H6;0.0283258!11842-124H6;0.29448!11837-124H1;0.0772294!10568-108B1;0.12096!13230-141I8;0.581344!13231-141I9;0.146664!10696-109G3;0.194749!10493-107B7;0.481089!10494-107B8;0.0666581!10850-111F4;0.606305!10851-111F5;0.0973876!10852-111F6;0.228852!10853-111F7;0.247141!10854-111F8;0.735192!10855-111F9;0.0111399!10856-111G1;0.753677!10847-111F1;0.28797!10846-111E9;0.53579!10848-111F2;0.766858!10845-111E8;0.361247!10857-111G2;0.309593!10858-111G3;0.0590072!10156-103A3;0.410421!11901-125F2;0.00471724!11902-125F3;0.902461!11903-125F4;0.921855!10689-109F5;0.786006!10648-109A9;0.680443!10784-110H1;0.242016!10744-110C6;0.571087!10772-110F7;0.203899!10474-106I6;0.95216!10600-108E6;0.416935!10684-109E9;0.786344!12226-129F3;0.033147!12227-129F4;0.691443!10508-107D4;0.549614!10539-107G8;0.719917!10607-108F4;0.801845!10555-107I6;0.379164!10774-110F9;0.783204!10637-108I7;0.384157!10663-109C6;0.635526!10728-110A8;0.856128!10729-110A9;0.333596!10430-106D7;0.101557!10730-110B1;0.661135!10813-111B3;0.952192!10812-111B2;0.240988!10037-101F1;0.137016!10172-103C1;0.00764694!10163-103B1;0.0271357!10076-102A4;0.00339583!10073-102A1;0.008515!10036-101E9;0.174099!10195-103E6;0.000966381!10277-104E7;0.00911067!10434-106E2;0.0863972!10550-107I1;0.998541!10545-107H5;0.691505!10544-107H4;0.741585!10704-109H2;0.284625!10510-107D6;0.906865!10558-107I9;0.178914!10020-101D2;0.352106!10732-110B3;0.46225!10049-101G4;0.398704!10698-109G5;0.913558!10437-106E5;0.597668!10417-106C3;0.831395!10035-101E8;0.288997!10171-103B9;0.00647058!10157-103A4;0.00591781!10034-101E7;0.00411967!10072-101I9;0.00317385!10199-103F1;0.179129!10200-103F2;0.127891!10697-109G4;0.880426!10723-110A3;0.410645!10179-103C8;0.254159!10160-103A7;0.168992!10180-103C9;0.364684!10162-103A9;0.302899!10021-101D3;0.338522!10840-111E3;0.678308!10706-109H4;0.520141!10033-101E6;0.516401!10032-101E5;0.00612384!10490-107B4;0.00354911!10439-106E7;0.412095!10022-101D4;0.530283!10176-103C5;0.891515!10469-106I1;0.00830794!10067-101I4;0.67754!10411-106B6;0.936678!10471-106I3;0.262395!10030-101E3;0.223592!10475-106I7;0.919023!10787-110H4;0.538236!10477-106I9;0.625126!10695-109G2;0.853657!11771-123I7;0.195533!11772-123I8;0.892896!11773-123I9;0.850423!10093-102C3;0.676733!10442-106F1;0.318163!10442-106F1;0.264036!10201-103F3;0.301772!10639-108I9;0.279673!11843-124H7;0.946052!11841-124H5;0.774635!10693-109F9;0.426541!10436-106E4;0.968902!10483-107A6;0.232041!10282-104F3;0.953539!10023-101D5;0.873235!10066-101I3;0.755493!10065-101I2;0.627502!10800-110I8;0.402519!10610-108F7;0.530788!10841-111E4;0.574155!10541-107H1;0.836629!10842-111E5;0.875971!10562-108A4;0.381162!10024-101D6;0.727171!10064-101I1;0.844591!10609-108F6;0.727802!10048-101G3;0.462824!10781-110G7;0.888623!10181-103D1;0.880392!10159-103A6;0.0109082!10056-101H2;0.021318!10737-110B8;0.00782906!10025-101D7;0.455052!10044-101F8;0.86765!10424-106D1;0.3123!10463-106H4;0.81091!10616-108G4;0.623902!10486-107A9;0.141504!10062-101H8;0.853871!10202-103F4;0.789558!10158-103A5;0.601327!10441-106E9;0.0470925!10031-101E4;0.668528!10063-101H9;0.00191219!10063-101H9;0.218082!11763-123H8;0.892887!11765-123I1;0.403889!11768-123I4;0.428202!10807-111A6;0.327202!10790-110H7;0.409624!10798-110I6;0.22299!10786-110H3;0.222784!10591-108D6;0.0895724!10593-108D8;0.0114526!10590-108D5;0.110889!10026-101D8;0.0380761!10096-102C6;0.30539!10168-103B6;0.941942!10154-103A1;0.0139002!10209-103G2;0.0128719!10061-101H7;0.679279!10027-101D9;0.734949!10043-101F7;0.335669!10783-110G9;0.430268!10028-101E1;0.507259!10060-101H6;0.40857!10203-103F5;0.872493!10059-101H5;0.92218!10047-101G2;0.895684!10029-101E2;0.881844!10058-101H4;0.816826!10418-106C4;0.977124!10492-107B6;0.559478!10694-109G1;0.271086!10797-110I5;0.208635!10057-101H3;0.751014!10100-102D1;0.7348!10055-101H1;0.889931!10204-103F6;0.763811!10191-103E2;0.166723!10563-108A5;0.763806
|name=PO3F2_si
|name=PO3F2_si
|tomtom_result=SUM1#MA0398.1;0;8.44179e-05;0.0401829;0.0803658;9;ATTATTTATG;AAAATTTTT;+!ARR1#MA0274.1;-3;0.00128946;0.613783;0.613783;7;ATTATTTATG;ATTCAAGT;-!Foxq1#MA0040.1;1;0.00386451;1.83951;0.955748;10;ATTATTTATG;TATTGTTTATT;+!Abd-B#MA0165.1;-4;0.0050343;2.39633;0.955748;6;ATTATTTATG;TTTATGA;+!Foxa2#MA0047.1;1;0.00530245;2.52397;0.955748;10;ATTATTTATG;CAATATTTACTT;+!NHP6A#MA0345.1;5;0.0066735;3.17659;0.955748;10;ATTATTTATG;TCATTTTTATATATAGGTCAT;-!NHP6B#MA0346.1;4;0.00748899;3.56476;0.955748;10;ATTATTTATG;TCATATTATATATAAATAAA;-!CG7056#MA0183.1;-1;0.00874346;4.16189;0.955748;8;ATTATTTATG;TAATTAAA;-!Lhx3#MA0135.1;2;0.0110651;5.26699;0.955748;10;ATTATTTATG;GATTAATTAATTT;-!hb#MA0049.1;-1;0.0127352;6.06197;0.955748;9;ATTATTTATG;TTTTTTATGC;-!FOXL1#MA0033.1;-2;0.0148655;7.07596;0.955748;8;ATTATTTATG;TATGTATA;-!HOXA5#MA0158.1;-2;0.0148655;7.07596;0.955748;8;ATTATTTATG;AATTAGTG;-!CG42234#MA0174.1;-4;0.0157449;7.49457;0.955748;6;ATTATTTATG;TTTATTA;+!FOXI1#MA0042.1;1;0.0178591;8.50094;0.955748;10;ATTATTTATG;GGATGTTTGTTT;+!vvl#MA0254.1;-2;0.0190635;9.07422;0.955748;6;ATTATTTATG;TATGCA;+!H2.0#MA0448.1;-4;0.0209958;9.99399;0.955748;6;ATTATTTATG;TTAATTA;+
}}
}}

Latest revision as of 14:33, 7 September 2012

Full Name: PO3F2_si

Motif matrix
POACGT
135.397286821705514.7383720930233034.34593023255814910.51841085271322
227.2093023255814580.02.393410852713182535.3972868217055
325.319767441860490.07.810077519379861531.870155038759748
460.8745155038760.91327519379844930.283430232558142.9287790697674447
50.566860465116280.88178294573643430.5668604651162862.984496124031004
60.85029069767441921.228197674418606513.32122093023256149.60029069767448
711.0222868217054621.981589147286830.4408914728682178431.5552325581396
855.9302325581395650.02.77131782945736976.2984496124031075
913.1007751937984555.1647286821705529.57364341085270537.16085271317834
1012.7543604651162895.82606589147287533.60222868217057612.81734496124032

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
SUM1#MA0398.108.44179e-050.04018290.08036589ATTATTTATGAAAATTTTT+
ARR1#MA0274.1-30.001289460.6137830.6137837ATTATTTATGATTCAAGT-
Foxq1#MA0040.110.003864511.839510.95574810ATTATTTATGTATTGTTTATT+
Abd-B#MA0165.1-40.00503432.396330.9557486ATTATTTATGTTTATGA+
Foxa2#MA0047.110.005302452.523970.95574810ATTATTTATGCAATATTTACTT+
NHP6A#MA0345.150.00667353.176590.95574810ATTATTTATGTCATTTTTATATATAGGTCAT-
NHP6B#MA0346.140.007488993.564760.95574810ATTATTTATGTCATATTATATATAAATAAA-
CG7056#MA0183.1-10.008743464.161890.9557488ATTATTTATGTAATTAAA-
Lhx3#MA0135.120.01106515.266990.95574810ATTATTTATGGATTAATTAATTT-
hb#MA0049.1-10.01273526.061970.9557489ATTATTTATGTTTTTTATGC-
FOXL1#MA0033.1-20.01486557.075960.9557488ATTATTTATGTATGTATA-
HOXA5#MA0158.1-20.01486557.075960.9557488ATTATTTATGAATTAGTG-
CG42234#MA0174.1-40.01574497.494570.9557486ATTATTTATGTTTATTA+
FOXI1#MA0042.110.01785918.500940.95574810ATTATTTATGGGATGTTTGTTT+
vvl#MA0254.1-20.01906359.074220.9557486ATTATTTATGTATGCA+
H2.0#MA0448.1-40.02099589.993990.9557486ATTATTTATGTTAATTA+
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