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MacroAPE 1083:CNhs11253 bl f1: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;866.0519826292187;4.371605790371833;712.0800219920939;18.132119185547992!2;415.4083539468455;423.18338041514033;760.538406718726;1.505588516...")
 
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9-110H6;0.0883886!10828-111C9;0.0623351!10788-110H5;0.139595!10792-110H9;0.11528!10765-110E9;0.105192!10829-111D1;0.153874!10830-111D2;0.14223!10831-111D3;0.411932!10832-111D4;0.122219!10833-111D5;0.0864375!10764-110E8;0.0933341!10770-110F5;0.122284!10399-106A3;0.272384!10400-106A4;0.0775876!10405-106A9;0.096559!10834-111D6;0.101819!10835-111D7;0.0854894!10836-111D8;0.10753!10837-111D9;0.320262!10699-109G6;0.117568!10802-111A1;0.325888!10796-110I4;0.364691!10010-101C1;0.092774!10810-111A9;0.384606!10421-106C7;0.375713!10708-109H6;0.146077!12235-129G3;0.149147!12236-129G4;0.241248!12237-129G5;0.435702!10167-103B5;0.11779!10151-102I7;0.0688447!10428-106D5;0.065884!10795-110I3;0.794584!10805-111A4;0.0598889!10052-101G7;0.724548!10189-103D9;0.287345!10589-108D4;0.381867!10425-106D2;0.428481!10427-106D4;0.336221!10702-109G9;0.0436701!10432-106D9;0.3106!10496-107C1;0.0741714!10718-109I7;0.0727463!10011-101C2;0.0540874!10053-101G8;0.351068!10686-109F2;0.3056!10084-102B3;0.502996!10012-101C3;0.0676393!10085-102B4;0.0647817!10482-107A5;0.11837!10419-106C5;0.305853!10080-102A8;0.445669!10760-110E4;0.349721!10709-109H7;0.152039!10710-109H8;0.180925!10703-109H1;0.0771017!10719-109I8;0.909031!10642-109A3;0.596854!10177-103C6;0.801891!10164-103B2;0.138705!10173-103C2;0.0886603!10166-103B4;0.093741!10083-102B2;0.118327!10188-103D8;0.110543!10552-107I3;0.0929643!10553-107I4;0.111124!10013-101C4;0.579064!10536-107G5;0.191908!10618-108G6;0.727318!10423-106C9;0.114316!10785-110H2;0.1137!12238-129G6;0.104683!12239-129G7;0.657747!12240-129G8;0.536573!10416-106C2;0.34154!10801-110I9;0.137825!10766-110F1;0.107809!10824-111C5;0.105682!10825-111C6;0.141235!10826-111C7;0.162765!10454-106G4;0.166629!10409-106B4;0.161297!10638-108I8;0.21719!10636-108I6;0.0586284!10513-107D9;0.138337!10420-106C6;0.198162!10082-102B1;0.768225!10014-101C5;0.264595!10070-101I7;0.255158!10452-106G2;0.199407!10453-106G3;0.296176!10449-106F8;0.247461!10042-101F6;0.289091!10069-101I6;0.06315!10193-103E4;0.412472!10631-108I1;0.0524588!10438-106E6;0.0518629!10488-107B2;0.11695!10196-103E7;0.12759!10071-101I8;0.298896!10071-101I8;0.189619!10041-101F5;0.137045!10451-106G1;0.227332!10450-106F9;0.225118!10604-108F1;0.2756!10605-108F2;0.348428!10606-108F3;0.204312!10603-108E9;0.347297!10497-107C2;0.252606!10448-106F7;0.0996018!10643-109A4;0.304856!10426-106D3;0.0695742!10431-106D8;0.197676!10197-103E8;0.235032!10443-106F2;0.396664!10815-111B5;0.109915!10816-111B6;0.180795!10817-111B7;0.207641!10015-101C6;0.163203!10410-106B5;0.402666!10054-101G9;0.5089!10758-110E2;0.198547!10711-109H9;0.954222!10040-101F4;0.224881!10470-106I2;0.0573334!10415-106C1;0.15974!10198-103E9;0.164515!10614-108G2;0.262584!10612-108F9;0.193095!10549-107H9;0.0775482!10615-108G3;0.426013!10487-107B1;0.763651!10433-106E1;0.0460412!10688-109F4;0.304544!10444-106F3;0.139125!10444-106F3;0.830385!10485-107A8;0.847851!10413-106B8;0.436745!10175-103C4;0.340546!10161-103A8;0.0741968!12131-128D7;0.0604805!10624-108H3;0.417226!10712-109I1;0.37211!10205-103F7;0.069892!10206-103F8;0.169541!10207-103F9;0.216968!10050-101G5;0.228716!10051-101G6;0.672491!10016-101C7;0.421726!10046-101G1;0.350881!10778-110G4;0.165739!10633-108I3;0.115699!10818-111B8;0.949514!10819-111B9;0.167591!10820-111C1;0.152792!10484-107A7;0.181923!10808-111A7;0.423896!10169-103B7;0.101725!10153-102I9;0.068251!13425-144D5;0.0775915!13433-144E4;0.988276!13437-144E8;0.935311!11904-125F5;0.923348!11905-125F6;0.4095!10039-101F3;0.577293!10791-110H8;0.0585871!10017-101C8;0.176934!10045-101F9;0.530428!10509-107D5;0.202416!10839-111E2;0.40599!10692-109F8;0.0620884!10079-102A7;0.188455!10078-102A6;0.25071!10721-110A1;0.525343!10569-108B2;0.325139!10570-108B3;0.280113!10571-108B4;0.469729!10647-109A8;0.175333!10752-110D5;0.928131!10782-110G8;0.159125!10726-110A6;0.365068!10018-101C9;0.759334!10086-102B5;0.605669!10182-103D2;0.749018!10165-103B3;0.0641891!10499-107C4;0.0618869!10408-106B3;0.109958!10019-101D1;0.15158!10068-101I5;0.428222!10075-102A3;0.311284!10077-102A5;0.389384!10727-110A7;0.773856!10775-110G1;0.0724483!10412-106B7;0.0387546!12231-129F8;0.366275!12232-129F9;0.277485!12233-129G1;0.19871!12234-129G2;0.234114!10414-106B9;0.573258!10170-103B8;0.344339!10183-103D3;0.0663!10150-102I6;0.0548864!10174-103C3;0.0588625!10155-103A2;0.133168!10038-101F2;0.0989474!10838-111E1;0.0789676!10759-110E3;0.848119!10514-107E1;0.772452!10465-106H6;0.121143!10691-109F7;0.29423!10843-111E6;0.451024!10844-111E7;0.813464!11747-123G1;0.753733!11748-123G2;0.617211!11749-123G3;0.897133!11750-123G4;0.606576!11751-123G5;0.67702!11840-124H4;0.656556!11752-123G6;0.405242!11753-123G7;0.593166!11754-123G8;0.576803!11755-123G9;0.813649!11756-123H1;0.857117!11833-124G6;0.265548!11760-123H5;0.350539!11836-124G9;0.611214!11758-123H3;0.240464!11835-124G8;0.283078!11762-123H7;0.152317!11838-124H2;0.591262!11757-123H2;0.21121!11759-123H4;0.979708!11761-123H6;0.281592!11842-124H6;0.305163!11837-124H1;0.0761388!10568-108B1;0.228143!13230-141I8;0.909251!13231-141I9;0.503016!10696-109G3;0.65786!10493-107B7;0.140142!10494-107B8;0.131948!10850-111F4;0.307754!10851-111F5;0.0489106!10852-111F6;0.219263!10853-111F7;0.388258!10854-111F8;0.195248!10855-111F9;0.594084!10856-111G1;0.997002!10847-111F1;0.227585!10846-111E9;0.850337!10848-111F2;0.267352!10845-111E8;0.183718!10857-111G2;0.152196!10858-111G3;0.130718!10156-103A3;0.246119!11901-125F2;0.0567684!11902-125F3;0.116153!11903-125F4;0.231926!10689-109F5;0.156763!10648-109A9;0.136054!10784-110H1;0.12486!10744-110C6;0.0465504!10772-110F7;0.157535!10474-106I6;0.0919731!10600-108E6;0.0944684!10684-109E9;0.63839!12226-129F3;0.949151!12227-129F4;0.181372!10508-107D4;0.110513!10539-107G8;0.533019!10607-108F4;0.692383!10555-107I6;0.345102!10774-110F9;0.979809!10637-108I7;0.0796617!10663-109C6;0.754048!10728-110A8;0.64329!10729-110A9;0.484725!10430-106D7;0.184601!10730-110B1;0.390329!10813-111B3;0.898688!10812-111B2;0.11707!10037-101F1;0.0783028!10172-103C1;0.0631075!10163-103B1;0.0700957!10076-102A4;0.0656582!10073-102A1;0.0582789!10036-101E9;0.131074!10195-103E6;0.0616362!10277-104E7;0.0738331!10434-106E2;0.046697!10550-107I1;0.258046!10545-107H5;0.167397!10544-107H4;0.295835!10704-109H2;0.0883837!10510-107D6;0.369382!10558-107I9;0.953041!10020-101D2;0.462266!10732-110B3;0.471707!10049-101G4;0.559973!10698-109G5;0.471214!10437-106E5;0.154172!10417-106C3;0.255165!10035-101E8;0.104842!10171-103B9;0.0546079!10157-103A4;0.0617925!10034-101E7;0.0602949!10072-101I9;0.0564624!10199-103F1;0.136692!10200-103F2;0.677596!10697-109G4;0.388357!10723-110A3;0.41501!10179-103C8;0.467951!10160-103A7;0.132575!10180-103C9;0.151148!10162-103A9;0.209037!10021-101D3;0.135168!10840-111E3;0.565246!10706-109H4;0.0411225!10033-101E6;0.177872!10032-101E5;0.0492323!10490-107B4;0.0584045!10439-106E7;0.0598373!10022-101D4;0.290343!10176-103C5;0.315491!10469-106I1;0.0735955!10067-101I4;0.11898!10411-106B6;0.112834!10471-106I3;0.364528!10030-101E3;0.0406967!10475-106I7;0.151387!10787-110H4;0.466158!10477-106I9;0.568384!10695-109G2;0.80818!11771-123I7;0.0774462!11772-123I8;0.0904747!11773-123I9;0.106401!10093-102C3;0.905733!10442-106F1;0.941079!10442-106F1;0.124848!10201-103F3;0.196164!10639-108I9;0.393861!11843-124H7;0.271577!11841-124H5;0.377144!10693-109F9;0.420138!10436-106E4;0.367244!10483-107A6;0.0847002!10282-104F3;0.255935!10023-101D5;0.788414!10066-101I3;0.680432!10065-101I2;0.314942!10800-110I8;0.379754!10610-108F7;0.947103!10841-111E4;0.57208!10541-107H1;0.524528!10842-111E5;0.800071!10562-108A4;0.910166!10024-101D6;0.978147!10064-101I1;0.273597!10609-108F6;0.273836!10048-101G3;0.982961!10781-110G7;0.265028!10181-103D1;0.479614!10159-103A6;0.0715871!10056-101H2;0.0704838!10737-110B8;0.129137!10025-101D7;0.266474!10044-101F8;0.719274!10424-106D1;0.311473!10463-106H4;0.0257817!10616-108G4;0.211001!10486-107A9;0.197823!10062-101H8;0.0892388!10202-103F4;0.14075!10158-103A5;0.650655!10441-106E9;0.0492559!10031-101E4;0.871226!10063-101H9;0.0591289!10063-101H9;0.144863!11763-123H8;0.19898!11765-123I1;0.490673!11768-123I4;0.622418!10807-111A6;0.62574!10790-110H7;0.970401!10798-110I6;0.740317!10786-110H3;0.580216!10591-108D6;0.958838!10593-108D8;0.712216!10590-108D5;0.926591!10026-101D8;0.31928!10096-102C6;0.995547!10168-103B6;0.646285!10154-103A1;0.0651494!10209-103G2;0.0617168!10061-101H7;0.560635!10027-101D9;0.351405!10043-101F7;0.208657!10783-110G9;0.914693!10028-101E1;0.318515!10060-101H6;0.764682!10203-103F5;0.281835!10059-101H5;0.528238!10047-101G2;0.528518!10029-101E2;0.818501!10058-101H4;0.637898!10418-106C4;0.351868!10492-107B6;0.30811!10694-109G1;0.151569!10797-110I5;0.155984!10057-101H3;0.402271!10100-102D1;0.555521!10055-101H1;0.238421!10204-103F6;0.174734!10191-103E2;0.196585!10563-108A5;0.496339
|name=CNhs11253_bl_f1
|name=CNhs11253_bl_f1
|tomtom_result=CRZ1#MA0285.1;1;0.00119226;0.567515;1;7;AGAGCCA;CTAAGCCAC;+!kni#MA0451.1;5;0.00380754;1.81239;1;7;AGAGCCA;AAACTAGAGCAC;+!Trl#MA0205.1;3;0.00748136;3.56113;1;7;AGAGCCA;GAGAGAGCAA;-!Dof2#MA0020.1;0;0.00850387;4.04784;1;6;AGAGCCA;AAAGCA;+!STP1#MA0394.1;-1;0.0159551;7.59465;1;6;AGAGCCA;GCGCCGCA;-!BAS1#MA0278.1;2;0.0196995;9.37695;1;7;AGAGCCA;GCACAGCCAGAGTCAAGTCAA;+
}}
}}

Latest revision as of 14:26, 7 September 2012

Full Name: CNhs11253_bl_f1

Motif matrix
POACGT
1866.05198262921874.371605790371833712.080021992093918.132119185547992
2415.4083539468455423.18338041514033760.5384067187261.5055885165209149
31600.63572959723140.00.00.0
40.00.01600.63572959723140.0
50.01600.63572959723140.00.0
6658.3813985678298939.889342281521.18249437394113241.1824943739411324
7506.38182317681884318.4384106124767464.9620551725833310.85344063535484

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
CRZ1#MA0285.110.001192260.56751517AGAGCCACTAAGCCAC+
kni#MA0451.150.003807541.8123917AGAGCCAAAACTAGAGCAC+
Trl#MA0205.130.007481363.5611317AGAGCCAGAGAGAGCAA-
Dof2#MA0020.100.008503874.0478416AGAGCCAAAAGCA+
STP1#MA0394.1-10.01595517.5946516AGAGCCAGCGCCGCA-
BAS1#MA0278.120.01969959.3769517AGAGCCAGCACAGCCAGAGTCAAGTCAA+
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