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MacroAPE 1083:Motif GCTNAT: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;0;1760;0!02;0;1760;0;0!03;0;0;0;1760!04;440;440;440;440!05;1760;0;0;0!06;0;0;0;1760 |macroape_1083_sample_pvalues=11376-118A8;0.00582375...")
 
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181-129A3;0.0115974!12176-128I7;0.0186138!12177-128I8;0.0047372!12182-129A4;0.00672348!12183-129A5;0.00407715!12184-129A6;0.00362514!10809-111A8;0.0266274!10597-108E3;0.790326!10717-109I6;0.762237!10455-106G5;0.61221!10534-107G3;0.0488091!10429-106D6;0.250323!10464-106H5;0.0661033!10827-111C8;0.110017!10789-110H6;0.0996186!10828-111C9;0.0198414!10788-110H5;0.163084!10792-110H9;0.0994073!10765-110E9;0.0472035!10829-111D1;0.105477!10830-111D2;0.075494!10831-111D3;0.00247719!10832-111D4;0.0284606!10833-111D5;0.00917066!10764-110E8;0.131101!10770-110F5;0.00507932!10399-106A3;0.000323618!10400-106A4;0.0228158!10405-106A9;0.0533058!10834-111D6;0.0108336!10835-111D7;0.028008!10836-111D8;0.280788!10837-111D9;0.708979!10699-109G6;0.140023!10802-111A1;0.160957!10796-110I4;0.381165!10010-101C1;0.621097!10810-111A9;0.716025!10421-106C7;0.522227!10708-109H6;0.00398726!12235-129G3;0.764536!12236-129G4;0.446625!12237-129G5;0.500884!10167-103B5;0.36476!10151-102I7;0.308236!10428-106D5;0.345514!10795-110I3;0.542891!10805-111A4;0.0465444!10052-101G7;0.550254!10189-103D9;0.534571!10589-108D4;0.965634!10425-106D2;0.786074!10427-106D4;0.417775!10702-109G9;0.0305268!10432-106D9;0.346285!10496-107C1;0.469379!10718-109I7;0.288215!10011-101C2;0.0455984!10053-101G8;0.429579!10686-109F2;0.00447621!10084-102B3;0.954948!10012-101C3;0.24103!10085-102B4;0.357179!10482-107A5;0.122241!10419-106C5;0.441027!10080-102A8;0.866066!10760-110E4;0.543768!10709-109H7;0.441312!10710-109H8;0.677161!10703-109H1;0.212081!10719-109I8;0.196482!10642-109A3;0.550621!10177-103C6;0.14486!10164-103B2;0.548174!10173-103C2;0.433113!10166-103B4;0.320787!10083-102B2;0.246445!10188-103D8;0.236553!10552-107I3;0.351686!10553-107I4;0.167906!10013-101C4;0.589776!10536-107G5;0.331897!10618-108G6;0.32041!10423-106C9;0.679534!10785-110H2;0.297755!12238-129G6;0.814744!12239-129G7;0.197592!12240-129G8;0.826281!10416-106C2;0.127811!10801-110I9;0.0843972!10766-110F1;0.336048!10824-111C5;0.188193!10825-111C6;0.648079!10826-111C7;0.719974!10454-106G4;0.639019!10409-106B4;0.726419!10638-108I8;0.161628!10636-108I6;0.748602!10513-107D9;0.237642!10420-106C6;0.626336!10082-102B1;0.830921!10014-101C5;0.621041!10070-101I7;0.522992!10452-106G2;0.329583!10453-106G3;0.035764!10449-106F8;0.0163562!10042-101F6;0.0217945!10069-101I6;0.214161!10193-103E4;0.298212!10631-108I1;0.298389!10438-106E6;0.0263613!10488-107B2;0.353084!10196-103E7;0.908984!10071-101I8;0.547167!10071-101I8;0.239692!10041-101F5;0.167771!10451-106G1;0.590051!10450-106F9;0.635576!10604-108F1;0.87589!10605-108F2;0.996575!10606-108F3;0.96745!10603-108E9;0.953294!10497-107C2;0.927427!10448-106F7;0.221713!10643-109A4;0.593658!10426-106D3;0.680442!10431-106D8;0.759627!10197-103E8;0.276719!10443-106F2;0.411655!10815-111B5;0.846161!10816-111B6;0.281337!10817-111B7;0.255374!10015-101C6;0.32427!10410-106B5;0.259915!10054-101G9;0.391858!10758-110E2;0.0710214!10711-109H9;0.485799!10040-101F4;0.952529!10470-106I2;0.368588!10415-106C1;0.542438!10198-103E9;0.550318!10614-108G2;0.289582!10612-108F9;0.0600472!10549-107H9;0.858168!10615-108G3;0.460014!10487-107B1;0.519297!10433-106E1;0.235111!10688-109F4;0.327766!10444-106F3;0.300317!10444-106F3;0.690302!10485-107A8;0.913303!10413-106B8;0.631081!10175-103C4;0.925692!10161-103A8;0.414597!12131-128D7;0.234071!10624-108H3;4.5865e-05!10712-109I1;0.238491!10205-103F7;0.0515856!10206-103F8;0.365735!10207-103F9;0.193821!10050-101G5;0.220926!10051-101G6;0.0382763!10016-101C7;0.157555!10046-101G1;0.244046!10778-110G4;0.134392!10633-108I3;0.475969!10818-111B8;0.983231!10819-111B9;0.946606!10820-111C1;0.940411!10484-107A7;0.874784!10808-111A7;0.869445!10169-103B7;0.032623!10153-102I9;0.518904!13425-144D5;0.370056!13433-144E4;0.768504!13437-144E8;0.766749!11904-125F5;0.759632!11905-125F6;0.022185!10039-101F3;0.0123863!10791-110H8;0.39306!10017-101C8;0.654902!10045-101F9;0.155463!10509-107D5;0.125189!10839-111E2;0.738424!10692-109F8;0.562185!10079-102A7;0.998002!10078-102A6;0.206339!10721-110A1;0.239217!10569-108B2;0.848882!10570-108B3;0.134728!10571-108B4;0.174216!10647-109A8;0.0830251!10752-110D5;0.515289!10782-110G8;0.579748!10726-110A6;0.942322!10018-101C9;0.866262!10086-102B5;0.523058!10182-103D2;0.137992!10165-103B3;0.280798!10499-107C4;0.216097!10408-106B3;0.674794!10019-101D1;0.374537!10068-101I5;0.725449!10075-102A3;0.484904!10077-102A5;0.894878!10727-110A7;0.310303!10775-110G1;0.00631006!10412-106B7;0.0100818!12231-129F8;0.711848!12232-129F9;0.369955!12233-129G1;0.920091!12234-129G2;0.769543!10414-106B9;0.315528!10170-103B8;0.240701!10183-103D3;0.439949!10150-102I6;0.474925!10174-103C3;0.457882!10155-103A2;0.292865!10038-101F2;0.187037!10838-111E1;0.207104!10759-110E3;0.0272954!10514-107E1;0.903072!10465-106H6;0.877926!10691-109F7;0.707508!10843-111E6;0.978519!10844-111E7;0.132915!11747-123G1;0.000742341!11748-123G2;0.164581!11749-123G3;0.0567279!11750-123G4;0.143981!11751-123G5;0.242474!11840-124H4;0.011436!11752-123G6;0.0385593!11753-123G7;0.0618337!11754-123G8;0.00820844!11755-123G9;0.0377164!11756-123H1;0.268078!11833-124G6;0.221651!11760-123H5;0.133918!11836-124G9;0.390978!11758-123H3;0.0790284!11835-124G8;0.442682!11762-123H7;0.367584!11838-124H2;0.625755!11757-123H2;0.896467!11759-123H4;0.676135!11761-123H6;0.115011!11842-124H6;0.153779!11837-124H1;0.376259!10568-108B1;0.506312!13230-141I8;0.793357!13231-141I9;0.204016!10696-109G3;0.350835!10493-107B7;0.0952219!10494-107B8;0.662368!10850-111F4;0.755659!10851-111F5;0.606111!10852-111F6;0.224396!10853-111F7;0.68169!10854-111F8;0.860539!10855-111F9;0.995977!10856-111G1;0.711273!10847-111F1;0.104184!10846-111E9;0.796244!10848-111F2;0.847636!10845-111E8;0.649741!10857-111G2;0.494488!10858-111G3;0.804183!10156-103A3;0.738522!11901-125F2;0.421278!11902-125F3;0.00488926!11903-125F4;0.00755813!10689-109F5;0.00223544!10648-109A9;0.743825!10784-110H1;0.782451!10744-110C6;0.967116!10772-110F7;0.0489825!10474-106I6;0.000132966!10600-108E6;0.102681!10684-109E9;0.0384984!12226-129F3;0.453197!12227-129F4;0.582877!10508-107D4;0.389183!10539-107G8;0.138594!10607-108F4;0.0113007!10555-107I6;0.379551!10774-110F9;0.0683574!10637-108I7;0.547995!10663-109C6;0.889624!10728-110A8;0.449464!10729-110A9;0.629206!10430-106D7;0.126641!10730-110B1;0.230657!10813-111B3;0.14383!10812-111B2;0.114987!10037-101F1;0.651879!10172-103C1;0.39502!10163-103B1;0.542242!10076-102A4;0.447609!10073-102A1;0.406518!10036-101E9;0.206278!10195-103E6;0.398688!10277-104E7;0.381319!10434-106E2;0.0313479!10550-107I1;0.910443!10545-107H5;0.742472!10544-107H4;0.987768!10704-109H2;0.373338!10510-107D6;0.641502!10558-107I9;0.240347!10020-101D2;0.431121!10732-110B3;0.536462!10049-101G4;0.198095!10698-109G5;0.239979!10437-106E5;0.261025!10417-106C3;0.707!10035-101E8;0.555343!10171-103B9;0.388165!10157-103A4;0.447386!10034-101E7;0.447826!10072-101I9;0.366014!10199-103F1;0.176059!10200-103F2;0.637894!10697-109G4;0.382074!10723-110A3;0.692284!10179-103C8;0.237161!10160-103A7;0.093337!10180-103C9;0.0658124!10162-103A9;0.0836441!10021-101D3;0.105144!10840-111E3;0.407543!10706-109H4;0.0083848!10033-101E6;0.47686!10032-101E5;0.211612!10490-107B4;0.369024!10439-106E7;0.910861!10022-101D4;0.700246!10176-103C5;0.28963!10469-106I1;0.413893!10067-101I4;0.34455!10411-106B6;0.204772!10471-106I3;0.054707!10030-101E3;0.155437!10475-106I7;0.0699226!10787-110H4;0.698462!10477-106I9;0.326655!10695-109G2;0.217197!11771-123I7;0.0346948!11772-123I8;0.211911!11773-123I9;0.846239!10093-102C3;0.0870351!10442-106F1;0.270602!10442-106F1;0.237539!10201-103F3;0.212399!10639-108I9;0.644201!11843-124H7;0.501212!11841-124H5;0.641841!10693-109F9;0.633644!10436-106E4;0.655215!10483-107A6;0.344523!10282-104F3;0.337532!10023-101D5;0.436375!10066-101I3;0.323789!10065-101I2;0.217374!10800-110I8;0.231368!10610-108F7;0.45672!10841-111E4;0.350094!10541-107H1;0.918944!10842-111E5;0.904078!10562-108A4;0.0745324!10024-101D6;0.105356!10064-101I1;0.460968!10609-108F6;0.226885!10048-101G3;0.995062!10781-110G7;0.346148!10181-103D1;0.12404!10159-103A6;0.312204!10056-101H2;0.277292!10737-110B8;0.167722!10025-101D7;0.655389!10044-101F8;0.509407!10424-106D1;0.394804!10463-106H4;0.0199362!10616-108G4;0.377095!10486-107A9;0.851385!10062-101H8;0.225773!10202-103F4;0.25463!10158-103A5;0.607672!10441-106E9;0.158155!10031-101E4;0.338527!10063-101H9;0.352584!10063-101H9;0.160344!11763-123H8;0.327299!11765-123I1;0.44773!11768-123I4;0.122638!10807-111A6;0.255884!10790-110H7;0.424367!10798-110I6;0.680138!10786-110H3;0.199324!10591-108D6;0.571989!10593-108D8;0.525371!10590-108D5;0.776677!10026-101D8;0.895361!10096-102C6;0.173818!10168-103B6;0.242238!10154-103A1;0.346885!10209-103G2;0.313454!10061-101H7;0.330888!10027-101D9;0.196012!10043-101F7;0.0513003!10783-110G9;0.618042!10028-101E1;0.52159!10060-101H6;0.250613!10203-103F5;0.191047!10059-101H5;0.253323!10047-101G2;0.203187!10029-101E2;0.734378!10058-101H4;0.568063!10418-106C4;0.312964!10492-107B6;0.92842!10694-109G1;0.390746!10797-110I5;0.0342037!10057-101H3;0.400526!10100-102D1;0.0963616!10055-101H1;0.263066!10204-103F6;0.145323!10191-103E2;0.576116!10563-108A5;0.821493
|name=motif_GCTNAT
|name=motif_GCTNAT
|tomtom_result=HAP5#MA0316.1;5;0.0109508;5.21257;1;6;GCTAAT;TGGGATCTGATTGGT;+!NFYA#MA0060.1;2;0.0155178;7.38649;1;6;GCTAAT;GCGCTGATTGGCTGAG;-!Mafb#MA0117.1;0;0.016996;8.09009;1;6;GCTAAT;GCTGACGG;+
}}
}}

Latest revision as of 14:15, 7 September 2012

Full Name: motif_GCTNAT

Motif matrix
POACGT
010017600
020176000
030001760
04440440440440
051760000
060001760

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
HAP5#MA0316.150.01095085.2125716GCTAATTGGGATCTGATTGGT+
NFYA#MA0060.120.01551787.3864916GCTAATGCGCTGATTGGCTGAG-
Mafb#MA0117.100.0169968.0900916GCTAATGCTGACGG+
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=MacroAPE_1083:Motif_GCTNAT&oldid=2134293"