MacroAPE 1083:Motif143: Difference between revisions
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1!10534-107G3;0.103156!10429-106D6;0.0266613!10464-106H5;0.24591!10827-111C8;0.171697!10789-110H6;0.256047!10828-111C9;0.178394!10788-110H5;0.420956!10792-110H9;0.0454466!10765-110E9;0.254179!10829-111D1;0.208399!10830-111D2;0.0491739!10831-111D3;0.162736!10832-111D4;0.149012!10833-111D5;0.078947!10764-110E8;0.0814842!10770-110F5;0.0535391!10399-106A3;0.154451!10400-106A4;0.0363226!10405-106A9;0.05416!10834-111D6;0.0322554!10835-111D7;0.187399!10836-111D8;0.160409!10837-111D9;0.213546!10699-109G6;0.198731!10802-111A1;0.424027!10796-110I4;0.473371!10010-101C1;0.0423221!10810-111A9;0.0217698!10421-106C7;0.132822!10708-109H6;0.57028!12235-129G3;0.028499!12236-129G4;0.473429!12237-129G5;0.931629!10167-103B5;0.543907!10151-102I7;0.141222!10428-106D5;0.0568736!10795-110I3;0.0150256!10805-111A4;0.0542145!10052-101G7;0.0122892!10189-103D9;0.0282504!10589-108D4;0.00354802!10425-106D2;0.295603!10427-106D4;0.104938!10702-109G9;0.242551!10432-106D9;0.831377!10496-107C1;0.0351021!10718-109I7;0.0831433!10011-101C2;0.0786492!10053-101G8;0.0195249!10686-109F2;0.00992925!10084-102B3;0.365811!10012-101C3;0.0214172!10085-102B4;0.0348516!10482-107A5;0.2687!10419-106C5;0.00818177!10080-102A8;0.0109195!10760-110E4;0.08096!10709-109H7;0.0219365!10710-109H8;0.00567202!10703-109H1;0.0991891!10719-109I8;0.236422!10642-109A3;0.185982!10177-103C6;0.190522!10164-103B2;0.0696371!10173-103C2;0.0438628!10166-103B4;0.392032!10083-102B2;0.200063!10188-103D8;0.174119!10552-107I3;0.0412948!10553-107I4;0.0215757!10013-101C4;0.0232733!10536-107G5;0.00439529!10618-108G6;0.0232108!10423-106C9;0.110787!10785-110H2;0.16793!12238-129G6;0.0527926!12239-129G7;0.632665!12240-129G8;0.250107!10416-106C2;0.446471!10801-110I9;0.13288!10766-110F1;0.19343!10824-111C5;0.406617!10825-111C6;0.16677!10826-111C7;0.21908!10454-106G4;0.199966!10409-106B4;0.124506!10638-108I8;0.213667!10636-108I6;0.0426132!10513-107D9;0.030097!10420-106C6;0.00502858!10082-102B1;0.0603959!10014-101C5;0.0575318!10070-101I7;0.0227815!10452-106G2;0.00592873!10453-106G3;0.0373935!10449-106F8;0.0588871!10042-101F6;0.0611467!10069-101I6;0.00518346!10193-103E4;0.00941525!10631-108I1;0.0555818!10438-106E6;0.0674108!10488-107B2;0.0274729!10196-103E7;0.133175!10071-101I8;0.0467759!10071-101I8;0.0183992!10041-101F5;0.452453!10451-106G1;0.0270077!10450-106F9;0.0192893!10604-108F1;0.0227462!10605-108F2;0.134183!10606-108F3;0.102794!10603-108E9;0.108224!10497-107C2;0.178574!10448-106F7;0.860853!10643-109A4;0.0257744!10426-106D3;0.0463537!10431-106D8;0.00630094!10197-103E8;0.00673447!10443-106F2;0.0260408!10815-111B5;0.141268!10816-111B6;0.0155634!10817-111B7;0.0130069!10015-101C6;0.0157587!10410-106B5;0.0415633!10054-101G9;0.380435!10758-110E2;0.00843071!10711-109H9;0.0257196!10040-101F4;0.00801269!10470-106I2;0.0722366!10415-106C1;0.0056078!10198-103E9;0.0571624!10614-108G2;0.0123585!10612-108F9;0.0462674!10549-107H9;0.0478192!10615-108G3;0.0329526!10487-107B1;0.124202!10433-106E1;0.0172375!10688-109F4;0.0221571!10444-106F3;0.0885545!10444-106F3;0.454014!10485-107A8;0.636206!10413-106B8;0.00166985!10175-103C4;0.122637!10161-103A8;0.0902952!12131-128D7;0.0168298!10624-108H3;0.11347!10712-109I1;0.0835106!10205-103F7;0.0791622!10206-103F8;0.00534172!10207-103F9;0.0139814!10050-101G5;0.028332!10051-101G6;0.0865999!10016-101C7;0.0190655!10046-101G1;0.0205652!10778-110G4;0.00619553!10633-108I3;0.254579!10818-111B8;0.0953451!10819-111B9;0.30347!10820-111C1;0.310274!10484-107A7;0.295538!10808-111A7;0.0188216!10169-103B7;0.0981079!10153-102I9;0.126647!13425-144D5;0.0317324!13433-144E4;0.170037!13437-144E8;0.195296!11904-125F5;0.200394!11905-125F6;0.0669186!10039-101F3;0.100967!10791-110H8;0.0551102!10017-101C8;0.00372051!10045-101F9;0.0634863!10509-107D5;0.0151355!10839-111E2;0.0403038!10692-109F8;0.016112!10079-102A7;0.0127828!10078-102A6;0.0109973!10721-110A1;0.0379341!10569-108B2;0.0973799!10570-108B3;0.312025!10571-108B4;0.0909648!10647-109A8;0.181849!10752-110D5;0.316503!10782-110G8;0.0491607!10726-110A6;0.524202!10018-101C9;0.131016!10086-102B5;0.15931!10182-103D2;0.0575729!10165-103B3;0.0544004!10499-107C4;0.0192879!10408-106B3;0.130607!10019-101D1;0.710215!10068-101I5;0.0539317!10075-102A3;0.00576039!10077-102A5;0.0468259!10727-110A7;0.00487731!10775-110G1;0.177126!10412-106B7;0.092507!12231-129F8;0.0225136!12232-129F9;0.350794!12233-129G1;0.309086!12234-129G2;0.355619!10414-106B9;0.551403!10170-103B8;0.153826!10183-103D3;0.176749!10150-102I6;0.142529!10174-103C3;0.0644983!10155-103A2;0.0293179!10038-101F2;0.00801018!10838-111E1;0.00684187!10759-110E3;0.0384607!10514-107E1;0.0104043!10465-106H6;0.0148816!10691-109F7;0.0337107!10843-111E6;8.72237e-06!10844-111E7;0.215539!11747-123G1;0.284163!11748-123G2;0.364987!11749-123G3;0.563208!11750-123G4;0.924885!11751-123G5;0.0196634!11840-124H4;0.913901!11752-123G6;0.611735!11753-123G7;0.779614!11754-123G8;0.814754!11755-123G9;0.491237!11756-123H1;0.21496!11833-124G6;0.705591!11760-123H5;0.985724!11836-124G9;0.903086!11758-123H3;0.94598!11835-124G8;0.64152!11762-123H7;0.434946!11838-124H2;0.287093!11757-123H2;0.737278!11759-123H4;0.143892!11761-123H6;0.476941!11842-124H6;0.836849!11837-124H1;0.569597!10568-108B1;0.529143!13230-141I8;0.261448!13231-141I9;0.334396!10696-109G3;0.3176!10493-107B7;0.868777!10494-107B8;0.214621!10850-111F4;0.242773!10851-111F5;0.000710428!10852-111F6;0.00137485!10853-111F7;0.121152!10854-111F8;0.000166696!10855-111F9;0.104525!10856-111G1;0.997752!10847-111F1;0.264079!10846-111E9;0.00204924!10848-111F2;0.0535191!10845-111E8;0.00278271!10857-111G2;0.0478859!10858-111G3;0.00121632!10156-103A3;4.62584e-05!11901-125F2;0.0580393!11902-125F3;0.00781862!11903-125F4;0.0537961!10689-109F5;0.0626614!10648-109A9;0.0259423!10784-110H1;0.0223721!10744-110C6;0.0295415!10772-110F7;0.306755!10474-106I6;0.0483877!10600-108E6;0.329201!10684-109E9;0.0469573!12226-129F3;0.0517455!12227-129F4;0.0345525!10508-107D4;0.615158!10539-107G8;0.521986!10607-108F4;0.492672!10555-107I6;0.189777!10774-110F9;0.307214!10637-108I7;0.0590246!10663-109C6;0.201642!10728-110A8;0.13153!10729-110A9;0.156725!10430-106D7;0.892903!10730-110B1;0.125345!10813-111B3;0.141404!10812-111B2;0.480455!10037-101F1;0.940021!10172-103C1;0.0452941!10163-103B1;0.216905!10076-102A4;0.0566456!10073-102A1;0.0718811!10036-101E9;0.590439!10195-103E6;0.03621!10277-104E7;0.0523994!10434-106E2;0.0174284!10550-107I1;0.0374022!10545-107H5;0.0095065!10544-107H4;0.0234061!10704-109H2;0.0202698!10510-107D6;0.824692!10558-107I9;0.0424153!10020-101D2;0.0308337!10732-110B3;0.0160035!10049-101G4;0.0317143!10698-109G5;0.0862048!10437-106E5;0.177442!10417-106C3;0.000958632!10035-101E8;0.243162!10171-103B9;0.0613928!10157-103A4;0.183395!10034-101E7;0.0754981!10072-101I9;0.0536012!10199-103F1;0.717142!10200-103F2;0.0442637!10697-109G4;0.0221125!10723-110A3;0.0862935!10179-103C8;0.0455441!10160-103A7;0.0172563!10180-103C9;0.0194186!10162-103A9;0.138312!10021-101D3;0.208557!10840-111E3;0.0447626!10706-109H4;0.0492739!10033-101E6;0.0222089!10032-101E5;0.0292379!10490-107B4;0.0438648!10439-106E7;0.0110074!10022-101D4;0.00470301!10176-103C5;0.0122651!10469-106I1;0.0889443!10067-101I4;0.0597091!10411-106B6;0.0175292!10471-106I3;0.0260217!10030-101E3;0.0246039!10475-106I7;0.00549008!10787-110H4;0.171476!10477-106I9;0.133994!10695-109G2;0.325447!11771-123I7;0.143994!11772-123I8;0.00367237!11773-123I9;0.0134297!10093-102C3;0.294578!10442-106F1;0.0712236!10442-106F1;0.0271655!10201-103F3;0.0697665!10639-108I9;0.0171455!11843-124H7;0.0150189!11841-124H5;0.00765247!10693-109F9;0.0394898!10436-106E4;0.0992021!10483-107A6;0.0519884!10282-104F3;0.143838!10023-101D5;0.204961!10066-101I3;0.0435233!10065-101I2;0.0187252!10800-110I8;0.0194087!10610-108F7;0.0715122!10841-111E4;0.183282!10541-107H1;0.135276!10842-111E5;0.0167112!10562-108A4;0.212784!10024-101D6;0.163476!10064-101I1;0.0337265!10609-108F6;0.0208774!10048-101G3;0.0795133!10781-110G7;0.074556!10181-103D1;0.186821!10159-103A6;0.0400093!10056-101H2;0.0122731!10737-110B8;0.0149989!10025-101D7;0.893799!10044-101F8;0.0206883!10424-106D1;0.00575121!10463-106H4;0.191212!10616-108G4;0.0483947!10486-107A9;0.0337436!10062-101H8;0.0379942!10202-103F4;0.0510523!10158-103A5;0.0206466!10441-106E9;0.0143437!10031-101E4;0.082573!10063-101H9;0.0250552!10063-101H9;0.510051!11763-123H8;0.00690979!11765-123I1;0.508872!11768-123I4;0.260542!10807-111A6;0.378175!10790-110H7;0.161583!10798-110I6;0.0529152!10786-110H3;0.573738!10591-108D6;0.038991!10593-108D8;0.105667!10590-108D5;0.0915765!10026-101D8;0.0481759!10096-102C6;0.0152642!10168-103B6;0.684345!10154-103A1;0.0948615!10209-103G2;0.0331548!10061-101H7;0.0181692!10027-101D9;0.0137288!10043-101F7;0.0447577!10783-110G9;0.000374253!10028-101E1;0.000150354!10060-101H6;0.0660037!10203-103F5;0.0177197!10059-101H5;0.0608934!10047-101G2;0.0308972!10029-101E2;0.0142464!10058-101H4;0.0144956!10418-106C4;0.00932588!10492-107B6;0.0300033!10694-109G1;0.0128551!10797-110I5;0.946308!10057-101H3;0.315478!10100-102D1;0.00885728!10055-101H1;0.00620723!10204-103F6;0.00680312!10191-103E2;0.0348177!10563-108A5;0.00245337 | ||
|name=motif143 | |name=motif143 | ||
|tomtom_result=NHP10#MA0344.1;0;0.00169351;0.806112;0.500799;8;GCCCCAGC;TCCCCGGC;-!MIG1#MA0337.1;0;0.00200358;0.953706;0.500799;7;GCCCCAGC;CCCCCGC;+!YPR022C#MA0436.1;-1;0.0021162;1.00731;0.500799;7;GCCCCAGC;CCCCACG;+!MET28#MA0332.1;-1;0.00212853;1.01318;0.500799;6;GCCCCAGC;CCACAG;-!EBF1#MA0154.1;0;0.00383432;1.82514;0.522628;8;GCCCCAGC;ACCCAAGGGA;+!ADR1#MA0268.1;0;0.00396226;1.88604;0.522628;7;GCCCCAGC;ACCCCAC;+!MIG3#MA0339.1;-1;0.00507231;2.41442;0.522628;7;GCCCCAGC;CCCCGCA;+!MET4#MA0335.1;-1;0.0055779;2.65508;0.522628;7;GCCCCAGC;CCACAGTT;-!INSM1#MA0155.1;2;0.00567342;2.70055;0.522628;8;GCCCCAGC;CGCCCCCTGACA;-!MIG2#MA0338.1;-1;0.00614247;2.92382;0.522628;7;GCCCCAGC;CCCCGCA;+!REI1#MA0364.1;-1;0.00643866;3.0648;0.522628;7;GCCCCAGC;CCCCTGA;+!MZF1_1-4#MA0056.1;0;0.00740071;3.52274;0.522628;6;GCCCCAGC;TCCCCA;-!ACE2#MA0267.1;-2;0.00740957;3.52695;0.522628;6;GCCCCAGC;ACCAGCA;+!Mafb#MA0117.1;0;0.00777458;3.7007;0.522628;8;GCCCCAGC;GCGTCAGC;-!TFAP2A#MA0003.1;0;0.0099891;4.75481;0.56186;8;GCCCCAGC;GCCCGGGGG;+!opa#MA0456.1;2;0.0102589;4.88326;0.56186;8;GCCCCAGC;GACCCCCCGCTG;+!NHLH1#MA0048.1;-1;0.0118285;5.63037;0.56186;7;GCCCCAGC;GCGCAGCTGCGT;+!RUNX1#MA0002.2;2;0.0120179;5.72053;0.56186;8;GCCCCAGC;AAACCACAGAC;-!Zfx#MA0146.1;3;0.0122713;5.84115;0.56186;8;GCCCCAGC;CAGGCCTCGGCCCC;-!SWI5#MA0402.1;-1;0.0133281;6.34417;0.56186;7;GCCCCAGC;AACCAGCA;-!Klf4#MA0039.2;0;0.0134807;6.4168;0.56186;8;GCCCCAGC;GCCCCACCCA;-!PPARG::RXRA#MA0065.2;8;0.0137447;6.54248;0.56186;7;GCCCCAGC;TGACCTTTGCCCTAC;-!YGR067C#MA0425.1;0;0.0148316;7.05984;0.56186;8;GCCCCAGC;ACCCCACTTTTTTG;+!MET31#MA0333.1;1;0.0149253;7.10447;0.56186;8;GCCCCAGC;CGCCACACT;-!Macho-1#MA0118.1;2;0.0169874;8.08602;0.595076;7;GCCCCAGC;GAACCCCCA;-!RDS2#MA0362.1;0;0.0178939;8.5175;0.601438;7;GCCCCAGC;CCCCGAG;- | |||
}} | }} | ||
Latest revision as of 14:14, 7 September 2012
Full Name: motif143
| Motif matrix | |||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
Sample specificity
The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon
TomTom analysis
<br>Analyst: Michiel de Hoon and Hiroko Ohmiya
Target_ID | Optimal_offset | p-value | E-value | q-value | Overlap | Query consensus | Target consensus | Orientation |
|---|---|---|---|---|---|---|---|---|
| NHP10#MA0344.1 | 0 | 0.00169351 | 0.806112 | 0.500799 | 8 | GCCCCAGC | TCCCCGGC | - |
| MIG1#MA0337.1 | 0 | 0.00200358 | 0.953706 | 0.500799 | 7 | GCCCCAGC | CCCCCGC | + |
| YPR022C#MA0436.1 | -1 | 0.0021162 | 1.00731 | 0.500799 | 7 | GCCCCAGC | CCCCACG | + |
| MET28#MA0332.1 | -1 | 0.00212853 | 1.01318 | 0.500799 | 6 | GCCCCAGC | CCACAG | - |
| EBF1#MA0154.1 | 0 | 0.00383432 | 1.82514 | 0.522628 | 8 | GCCCCAGC | ACCCAAGGGA | + |
| ADR1#MA0268.1 | 0 | 0.00396226 | 1.88604 | 0.522628 | 7 | GCCCCAGC | ACCCCAC | + |
| MIG3#MA0339.1 | -1 | 0.00507231 | 2.41442 | 0.522628 | 7 | GCCCCAGC | CCCCGCA | + |
| MET4#MA0335.1 | -1 | 0.0055779 | 2.65508 | 0.522628 | 7 | GCCCCAGC | CCACAGTT | - |
| INSM1#MA0155.1 | 2 | 0.00567342 | 2.70055 | 0.522628 | 8 | GCCCCAGC | CGCCCCCTGACA | - |
| MIG2#MA0338.1 | -1 | 0.00614247 | 2.92382 | 0.522628 | 7 | GCCCCAGC | CCCCGCA | + |
| REI1#MA0364.1 | -1 | 0.00643866 | 3.0648 | 0.522628 | 7 | GCCCCAGC | CCCCTGA | + |
| MZF1_1-4#MA0056.1 | 0 | 0.00740071 | 3.52274 | 0.522628 | 6 | GCCCCAGC | TCCCCA | - |
| ACE2#MA0267.1 | -2 | 0.00740957 | 3.52695 | 0.522628 | 6 | GCCCCAGC | ACCAGCA | + |
| Mafb#MA0117.1 | 0 | 0.00777458 | 3.7007 | 0.522628 | 8 | GCCCCAGC | GCGTCAGC | - |
| TFAP2A#MA0003.1 | 0 | 0.0099891 | 4.75481 | 0.56186 | 8 | GCCCCAGC | GCCCGGGGG | + |
| opa#MA0456.1 | 2 | 0.0102589 | 4.88326 | 0.56186 | 8 | GCCCCAGC | GACCCCCCGCTG | + |
| NHLH1#MA0048.1 | -1 | 0.0118285 | 5.63037 | 0.56186 | 7 | GCCCCAGC | GCGCAGCTGCGT | + |
| RUNX1#MA0002.2 | 2 | 0.0120179 | 5.72053 | 0.56186 | 8 | GCCCCAGC | AAACCACAGAC | - |
| Zfx#MA0146.1 | 3 | 0.0122713 | 5.84115 | 0.56186 | 8 | GCCCCAGC | CAGGCCTCGGCCCC | - |
| SWI5#MA0402.1 | -1 | 0.0133281 | 6.34417 | 0.56186 | 7 | GCCCCAGC | AACCAGCA | - |
| Klf4#MA0039.2 | 0 | 0.0134807 | 6.4168 | 0.56186 | 8 | GCCCCAGC | GCCCCACCCA | - |
| PPARG::RXRA#MA0065.2 | 8 | 0.0137447 | 6.54248 | 0.56186 | 7 | GCCCCAGC | TGACCTTTGCCCTAC | - |
| YGR067C#MA0425.1 | 0 | 0.0148316 | 7.05984 | 0.56186 | 8 | GCCCCAGC | ACCCCACTTTTTTG | + |
| MET31#MA0333.1 | 1 | 0.0149253 | 7.10447 | 0.56186 | 8 | GCCCCAGC | CGCCACACT | - |
| Macho-1#MA0118.1 | 2 | 0.0169874 | 8.08602 | 0.595076 | 7 | GCCCCAGC | GAACCCCCA | - |
| RDS2#MA0362.1 | 0 | 0.0178939 | 8.5175 | 0.601438 | 7 | GCCCCAGC | CCCCGAG | - |
