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MacroAPE 1083:CTACTTC,motif605: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;272.75;1712.87;2.182;194.198!2;2.182;168.014;2.182;2009.622!3;1693.232;91.644;115.646;281.478!4;2.182;1599.406;2.182;578.23!5;268.386;2.182;...")
 
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8-111C9;0.178528!10788-110H5;0.199422!10792-110H9;0.378553!10765-110E9;0.251347!10829-111D1;0.0605893!10830-111D2;0.0216601!10831-111D3;0.24249!10832-111D4;0.150658!10833-111D5;0.123897!10764-110E8;0.103939!10770-110F5;0.110029!10399-106A3;0.218173!10400-106A4;0.150634!10405-106A9;0.106461!10834-111D6;0.13478!10835-111D7;0.0939453!10836-111D8;0.00734037!10837-111D9;0.12573!10699-109G6;0.0783124!10802-111A1;0.037081!10796-110I4;0.159532!10010-101C1;0.880119!10810-111A9;0.21392!10421-106C7;0.894307!10708-109H6;0.0174251!12235-129G3;0.981425!12236-129G4;0.621152!12237-129G5;0.850731!10167-103B5;0.334317!10151-102I7;0.143878!10428-106D5;0.101205!10795-110I3;0.873!10805-111A4;0.0052298!10052-101G7;0.261491!10189-103D9;0.0448975!10589-108D4;0.817958!10425-106D2;0.909435!10427-106D4;0.622921!10702-109G9;0.114184!10432-106D9;0.277991!10496-107C1;0.117197!10718-109I7;0.323006!10011-101C2;0.133329!10053-101G8;0.219746!10686-109F2;0.375088!10084-102B3;0.19022!10012-101C3;0.0842288!10085-102B4;0.138089!10482-107A5;0.132238!10419-106C5;0.922048!10080-102A8;0.940272!10760-110E4;0.0482341!10709-109H7;0.516146!10710-109H8;0.434063!10703-109H1;0.670113!10719-109I8;0.440459!10642-109A3;0.321988!10177-103C6;0.43448!10164-103B2;0.0711707!10173-103C2;0.119326!10166-103B4;0.175114!10083-102B2;0.173795!10188-103D8;0.126242!10552-107I3;0.0814363!10553-107I4;0.899386!10013-101C4;0.841193!10536-107G5;0.124158!10618-108G6;0.91502!10423-106C9;0.13943!10785-110H2;0.355027!12238-129G6;0.277544!12239-129G7;0.571304!12240-129G8;0.9428!10416-106C2;0.623054!10801-110I9;0.0156742!10766-110F1;0.286517!10824-111C5;0.18744!10825-111C6;0.0937424!10826-111C7;0.109244!10454-106G4;0.0341922!10409-106B4;0.246679!10638-108I8;0.209114!10636-108I6;0.520273!10513-107D9;0.693899!10420-106C6;0.934788!10082-102B1;0.684214!10014-101C5;0.301929!10070-101I7;0.213698!10452-106G2;0.106657!10453-106G3;0.968688!10449-106F8;0.84679!10042-101F6;0.90751!10069-101I6;0.0938658!10193-103E4;0.0173109!10631-108I1;0.128183!10438-106E6;0.0726349!10488-107B2;0.978815!10196-103E7;0.997493!10071-101I8;0.240694!10071-101I8;0.0488016!10041-101F5;0.125864!10451-106G1;0.467676!10450-106F9;0.684254!10604-108F1;0.896418!10605-108F2;0.171228!10606-108F3;0.109512!10603-108E9;0.199627!10497-107C2;0.449445!10448-106F7;0.570785!10643-109A4;0.409741!10426-106D3;0.994607!10431-106D8;0.993815!10197-103E8;0.966762!10443-106F2;0.04107!10815-111B5;0.599845!10816-111B6;0.435092!10817-111B7;0.446098!10015-101C6;0.309407!10410-106B5;0.315114!10054-101G9;0.679876!10758-110E2;0.0531468!10711-109H9;0.0123293!10040-101F4;0.108454!10470-106I2;0.172791!10415-106C1;0.775861!10198-103E9;0.278892!10614-108G2;0.171118!10612-108F9;0.91723!10549-107H9;0.958745!10615-108G3;0.91784!10487-107B1;0.551122!10433-106E1;0.293911!10688-109F4;0.767413!10444-106F3;0.223237!10444-106F3;0.634226!10485-107A8;0.518089!10413-106B8;0.585961!10175-103C4;0.582522!10161-103A8;0.0571484!12131-128D7;0.0421185!10624-108H3;0.422561!10712-109I1;0.189978!10205-103F7;0.248188!10206-103F8;0.0246567!10207-103F9;0.0786928!10050-101G5;0.0171195!10051-101G6;0.0790398!10016-101C7;0.10624!10046-101G1;0.0603154!10778-110G4;0.123426!10633-108I3;0.628558!10818-111B8;0.855957!10819-111B9;0.48712!10820-111C1;0.406526!10484-107A7;0.5223!10808-111A7;0.883169!10169-103B7;0.0144197!10153-102I9;0.0974177!13425-144D5;0.0656978!13433-144E4;0.325162!13437-144E8;0.407623!11904-125F5;0.568367!11905-125F6;0.278421!10039-101F3;0.661953!10791-110H8;0.135966!10017-101C8;0.951515!10045-101F9;0.14744!10509-107D5;0.0278129!10839-111E2;0.668789!10692-109F8;0.596254!10079-102A7;0.308556!10078-102A6;0.0467812!10721-110A1;0.197554!10569-108B2;0.96053!10570-108B3;0.501127!10571-108B4;0.502144!10647-109A8;0.537344!10752-110D5;0.356767!10782-110G8;0.250174!10726-110A6;0.494551!10018-101C9;0.211933!10086-102B5;0.545113!10182-103D2;0.769619!10165-103B3;0.0715013!10499-107C4;0.0962734!10408-106B3;0.761295!10019-101D1;0.663208!10068-101I5;0.604508!10075-102A3;0.139872!10077-102A5;0.627909!10727-110A7;0.744507!10775-110G1;0.0313587!10412-106B7;0.0197323!12231-129F8;0.728546!12232-129F9;0.0709138!12233-129G1;0.0209282!12234-129G2;0.0617999!10414-106B9;0.0431095!10170-103B8;0.962463!10183-103D3;0.227689!10150-102I6;0.166835!10174-103C3;0.114369!10155-103A2;0.047838!10038-101F2;0.067232!10838-111E1;0.0773226!10759-110E3;0.219195!10514-107E1;0.421867!10465-106H6;0.714813!10691-109F7;0.619718!10843-111E6;0.206399!10844-111E7;0.783659!11747-123G1;0.497833!11748-123G2;0.534488!11749-123G3;0.596503!11750-123G4;0.673039!11751-123G5;0.638253!11840-124H4;0.784527!11752-123G6;0.333772!11753-123G7;0.815749!11754-123G8;0.649032!11755-123G9;0.692587!11756-123H1;0.776424!11833-124G6;0.851479!11760-123H5;0.583423!11836-124G9;0.989513!11758-123H3;0.99451!11835-124G8;0.647595!11762-123H7;0.363109!11838-124H2;0.393614!11757-123H2;0.115503!11759-123H4;0.387066!11761-123H6;0.56502!11842-124H6;0.421615!11837-124H1;0.669137!10568-108B1;0.496957!13230-141I8;0.496841!13231-141I9;0.800913!10696-109G3;0.673533!10493-107B7;0.0397587!10494-107B8;0.545934!10850-111F4;0.569354!10851-111F5;0.890006!10852-111F6;0.95873!10853-111F7;0.885933!10854-111F8;0.984992!10855-111F9;0.713696!10856-111G1;0.675522!10847-111F1;0.877498!10846-111E9;0.954141!10848-111F2;0.850799!10845-111E8;0.322036!10857-111G2;0.966217!10858-111G3;0.78634!10156-103A3;0.337337!11901-125F2;0.100571!11902-125F3;0.0252804!11903-125F4;0.0625948!10689-109F5;0.0744247!10648-109A9;0.587552!10784-110H1;0.821194!10744-110C6;0.231735!10772-110F7;0.201396!10474-106I6;0.0809622!10600-108E6;0.189323!10684-109E9;0.989941!12226-129F3;0.830564!12227-129F4;0.811833!10508-107D4;0.165453!10539-107G8;0.49548!10607-108F4;0.726263!10555-107I6;0.865264!10774-110F9;0.501684!10637-108I7;0.437457!10663-109C6;0.255077!10728-110A8;0.365132!10729-110A9;0.271603!10430-106D7;0.757991!10730-110B1;0.205104!10813-111B3;0.650393!10812-111B2;0.782512!10037-101F1;0.0609715!10172-103C1;0.127029!10163-103B1;0.263362!10076-102A4;0.0942589!10073-102A1;0.155286!10036-101E9;0.125037!10195-103E6;0.156392!10277-104E7;0.118834!10434-106E2;0.0886462!10550-107I1;0.532387!10545-107H5;0.994161!10544-107H4;0.511998!10704-109H2;0.682988!10510-107D6;0.7972!10558-107I9;0.845891!10020-101D2;0.304884!10732-110B3;0.123501!10049-101G4;0.367684!10698-109G5;0.543282!10437-106E5;0.135144!10417-106C3;0.450815!10035-101E8;0.866899!10171-103B9;0.168216!10157-103A4;0.15944!10034-101E7;0.125154!10072-101I9;0.159079!10199-103F1;0.142165!10200-103F2;0.673502!10697-109G4;0.0189211!10723-110A3;0.485788!10179-103C8;0.592351!10160-103A7;0.085029!10180-103C9;0.0951009!10162-103A9;0.307563!10021-101D3;0.270841!10840-111E3;0.311567!10706-109H4;0.232423!10033-101E6;0.919754!10032-101E5;0.162437!10490-107B4;0.163005!10439-106E7;0.942688!10022-101D4;0.887263!10176-103C5;0.0486458!10469-106I1;0.119419!10067-101I4;0.887787!10411-106B6;0.0885596!10471-106I3;0.513928!10030-101E3;0.153098!10475-106I7;0.0279581!10787-110H4;0.287004!10477-106I9;0.785174!10695-109G2;0.30944!11771-123I7;0.0543588!11772-123I8;0.890916!11773-123I9;0.969675!10093-102C3;0.738349!10442-106F1;0.628512!10442-106F1;0.6692!10201-103F3;0.342348!10639-108I9;0.176382!11843-124H7;0.477415!11841-124H5;0.911234!10693-109F9;0.397081!10436-106E4;0.554966!10483-107A6;0.545933!10282-104F3;0.811783!10023-101D5;0.433896!10066-101I3;0.145277!10065-101I2;0.059021!10800-110I8;0.01861!10610-108F7;0.762928!10841-111E4;0.443762!10541-107H1;0.960826!10842-111E5;0.939912!10562-108A4;0.371333!10024-101D6;0.60483!10064-101I1;0.645492!10609-108F6;0.266915!10048-101G3;0.429894!10781-110G7;0.272067!10181-103D1;0.831838!10159-103A6;0.0477874!10056-101H2;0.0836071!10737-110B8;0.122525!10025-101D7;0.731137!10044-101F8;0.825998!10424-106D1;0.794069!10463-106H4;0.0719946!10616-108G4;0.926451!10486-107A9;0.0355011!10062-101H8;0.095446!10202-103F4;0.215856!10158-103A5;0.111633!10441-106E9;0.065992!10031-101E4;0.42256!10063-101H9;0.122464!10063-101H9;0.136779!11763-123H8;0.0680709!11765-123I1;0.815954!11768-123I4;0.297026!10807-111A6;0.894902!10790-110H7;0.685429!10798-110I6;0.985734!10786-110H3;0.8362!10591-108D6;0.708557!10593-108D8;0.600147!10590-108D5;0.357637!10026-101D8;0.787894!10096-102C6;0.539569!10168-103B6;0.694906!10154-103A1;0.0977505!10209-103G2;0.0671095!10061-101H7;0.138495!10027-101D9;0.125904!10043-101F7;0.263225!10783-110G9;0.621613!10028-101E1;0.969986!10060-101H6;0.026255!10203-103F5;0.0119942!10059-101H5;0.124116!10047-101G2;0.145513!10029-101E2;0.923336!10058-101H4;0.273885!10418-106C4;0.0407196!10492-107B6;0.534922!10694-109G1;0.982892!10797-110I5;0.284629!10057-101H3;0.969076!10100-102D1;0.0176902!10055-101H1;0.162739!10204-103F6;0.197877!10191-103E2;0.00975519!10563-108A5;0.591411
|name=CTACTTC,motif605,CNhs13472,T:2182.0(45.69%),B:29537.7(37.50%),P:1e-30
|name=CTACTTC,motif605,CNhs13472,T:2182.0(45.69%),B:29537.7(37.50%),P:1e-30
|tomtom_result=ELF5#MA0136.1;-1;0.00391353;1.86284;1;6;CTACTTC;TACTTCCTT;+!GABPA#MA0062.2;1;0.00393678;1.87391;1;7;CTACTTC;GCCACTTCCGG;-!SPI1#MA0080.2;-2;0.0114863;5.46747;1;5;CTACTTC;ACTTCCT;-!br_Z2#MA0011.1;2;0.0123684;5.88734;1;6;CTACTTC;TACTATTT;+!NKX3-1#MA0124.1;0;0.0159403;7.58758;1;7;CTACTTC;ATACTTA;+!Nkx3-2#MA0122.1;1;0.0194782;9.27162;1;7;CTACTTC;TCCACTTAA;-!RORA_2#MA0072.1;5;0.0196972;9.37585;1;7;CTACTTC;TTGACCTACTTATA;-
}}
}}

Latest revision as of 14:02, 7 September 2012

Full Name: CTACTTC,motif605,CNhs13472,T:2182.0(45.69%),B:29537.7(37.50%),P:1e-30

Motif matrix
POACGT
1272.751712.872.182194.198
22.182168.0142.1822009.622
31693.23291.644115.646281.478
42.1821599.4062.182578.23
5268.3862.1822.1821909.25
62.1822.1822.1822175.454
7202.9261974.712.1822.182

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
ELF5#MA0136.1-10.003913531.8628416CTACTTCTACTTCCTT+
GABPA#MA0062.210.003936781.8739117CTACTTCGCCACTTCCGG-
SPI1#MA0080.2-20.01148635.4674715CTACTTCACTTCCT-
br_Z2#MA0011.120.01236845.8873416CTACTTCTACTATTT+
NKX3-1#MA0124.100.01594037.5875817CTACTTCATACTTA+
Nkx3-2#MA0122.110.01947829.2716217CTACTTCTCCACTTAA-
RORA_2#MA0072.150.01969729.3758517CTACTTCTTGACCTACTTATA-
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