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MacroAPE 1083:Motif TTNAGC: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!01;0;0;0;10896!02;0;0;0;10896!03;2724;2724;2724;2724!04;10896;0;0;0!05;0;0;10896;0!06;0;10896;0;0 |macroape_1083_sample_pvalues=11376-118A8;0...")
 
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9!10494-107B8;0.118811!10850-111F4;0.235883!10851-111F5;0.545148!10852-111F6;0.761653!10853-111F7;0.833477!10854-111F8;0.355991!10855-111F9;0.237331!10856-111G1;0.561857!10847-111F1;0.748938!10846-111E9;0.221951!10848-111F2;0.384853!10845-111E8;0.234597!10857-111G2;0.439986!10858-111G3;0.341047!10156-103A3;0.407213!11901-125F2;0.106652!11902-125F3;0.528273!11903-125F4;0.263118!10689-109F5;0.126811!10648-109A9;0.0272243!10784-110H1;0.853008!10744-110C6;0.768174!10772-110F7;0.580681!10474-106I6;0.4866!10600-108E6;0.1621!10684-109E9;0.648095!12226-129F3;0.768786!12227-129F4;0.304293!10508-107D4;0.702073!10539-107G8;0.555011!10607-108F4;0.491959!10555-107I6;0.12501!10774-110F9;0.945178!10637-108I7;0.911016!10663-109C6;0.182966!10728-110A8;0.136612!10729-110A9;0.946426!10430-106D7;0.646211!10730-110B1;0.0567885!10813-111B3;0.094567!10812-111B2;0.896401!10037-101F1;0.274306!10172-103C1;0.0795493!10163-103B1;0.0704331!10076-102A4;0.122559!10073-102A1;0.0837469!10036-101E9;0.137575!10195-103E6;0.10189!10277-104E7;0.0916213!10434-106E2;0.400177!10550-107I1;0.346452!10545-107H5;0.623834!10544-107H4;0.25595!10704-109H2;0.397107!10510-107D6;0.909923!10558-107I9;0.86077!10020-101D2;0.965769!10732-110B3;0.379213!10049-101G4;0.330851!10698-109G5;0.172238!10437-106E5;0.816444!10417-106C3;0.445575!10035-101E8;0.223762!10171-103B9;0.0837946!10157-103A4;0.0984009!10034-101E7;0.086882!10072-101I9;0.10329!10199-103F1;0.0633897!10200-103F2;0.936989!10697-109G4;0.0905009!10723-110A3;0.980329!10179-103C8;0.940223!10160-103A7;0.0151798!10180-103C9;0.0148609!10162-103A9;0.0360617!10021-101D3;0.0309708!10840-111E3;0.375329!10706-109H4;0.158086!10033-101E6;0.114983!10032-101E5;0.143336!10490-107B4;0.10274!10439-106E7;0.395589!10022-101D4;0.893754!10176-103C5;0.452841!10469-106I1;0.0460404!10067-101I4;0.782315!10411-106B6;0.197351!10471-106I3;0.846813!10030-101E3;0.0598203!10475-106I7;0.138309!10787-110H4;0.639976!10477-106I9;0.442128!10695-109G2;0.232977!11771-123I7;0.254708!11772-123I8;0.274871!11773-123I9;0.234009!10093-102C3;0.454018!10442-106F1;0.902649!10442-106F1;0.783178!10201-103F3;0.990628!10639-108I9;0.324795!11843-124H7;0.311044!11841-124H5;0.0704971!10693-109F9;0.255668!10436-106E4;0.0286569!10483-107A6;0.43104!10282-104F3;0.182873!10023-101D5;0.0827845!10066-101I3;0.0927715!10065-101I2;0.0375874!10800-110I8;0.10117!10610-108F7;0.954643!10841-111E4;0.71759!10541-107H1;0.543833!10842-111E5;0.788761!10562-108A4;0.852896!10024-101D6;0.112393!10064-101I1;0.838406!10609-108F6;0.427459!10048-101G3;0.0153075!10781-110G7;0.23573!10181-103D1;0.250989!10159-103A6;0.154065!10056-101H2;0.171954!10737-110B8;0.09544!10025-101D7;0.717019!10044-101F8;0.819642!10424-106D1;0.669514!10463-106H4;0.545192!10616-108G4;0.588118!10486-107A9;0.669305!10062-101H8;0.928606!10202-103F4;0.242187!10158-103A5;0.493693!10441-106E9;0.290139!10031-101E4;0.531019!10063-101H9;0.106703!10063-101H9;0.0820015!11763-123H8;0.230261!11765-123I1;0.982815!11768-123I4;0.703684!10807-111A6;0.879381!10790-110H7;0.689283!10798-110I6;0.580911!10786-110H3;0.41333!10591-108D6;0.307891!10593-108D8;0.538328!10590-108D5;0.274094!10026-101D8;0.494732!10096-102C6;0.833439!10168-103B6;0.603922!10154-103A1;0.110009!10209-103G2;0.205544!10061-101H7;0.157259!10027-101D9;0.0411824!10043-101F7;0.781299!10783-110G9;0.721076!10028-101E1;0.881387!10060-101H6;0.202962!10203-103F5;0.0913936!10059-101H5;0.225273!10047-101G2;0.182184!10029-101E2;0.48444!10058-101H4;0.418635!10418-106C4;0.0994917!10492-107B6;0.762828!10694-109G1;0.723936!10797-110I5;0.960072!10057-101H3;0.604752!10100-102D1;0.290867!10055-101H1;0.383309!10204-103F6;0.2971!10191-103E2;0.475166!10563-108A5;0.208227
|name=motif_TTNAGC
|name=motif_TTNAGC
|tomtom_result=ct#MA0218.1;0;0.0145901;6.94488;1;6;TTAAGC;TTGAAC;+!REST#MA0138.2;0;0.0146093;6.95403;1;6;TTAAGC;TTCAGCACCATGGACAGCGCC;+!Mafb#MA0117.1;2;0.016996;8.09009;1;6;TTAAGC;GCGTCAGC;-!CEBPA#MA0102.2;0;0.020483;9.74992;1;6;TTAAGC;TTTCGCAAT;+
}}
}}

Latest revision as of 13:59, 7 September 2012

Full Name: motif_TTNAGC

Motif matrix
POACGT
0100010896
0200010896
032724272427242724
0410896000
0500108960
0601089600

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
ct#MA0218.100.01459016.9448816TTAAGCTTGAAC+
REST#MA0138.200.01460936.9540316TTAAGCTTCAGCACCATGGACAGCGCC+
Mafb#MA0117.120.0169968.0900916TTAAGCGCGTCAGC-
CEBPA#MA0102.200.0204839.7499216TTAAGCTTTCGCAAT+
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=MacroAPE_1083:Motif_TTNAGC&oldid=2134199"