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MacroAPE 1083:CNhs10846 bu f1: Difference between revisions

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17876!10455-106G5;0.0294604!10534-107G3;0.587193!10429-106D6;0.0611697!10464-106H5;0.208025!10827-111C8;0.394216!10789-110H6;0.844553!10828-111C9;0.706832!10788-110H5;0.246474!10792-110H9;0.315042!10765-110E9;0.773328!10829-111D1;0.406196!10830-111D2;0.818713!10831-111D3;0.234757!10832-111D4;0.605095!10833-111D5;0.294977!10764-110E8;0.655137!10770-110F5;0.522482!10399-106A3;0.617504!10400-106A4;0.28267!10405-106A9;0.277769!10834-111D6;0.295779!10835-111D7;0.836545!10836-111D8;0.380017!10837-111D9;0.18089!10699-109G6;0.704512!10802-111A1;0.421705!10796-110I4;0.288479!10010-101C1;0.132965!10810-111A9;0.0052791!10421-106C7;0.00523218!10708-109H6;0.534885!12235-129G3;0.0399992!12236-129G4;0.891709!12237-129G5;0.041774!10167-103B5;0.530433!10151-102I7;0.833638!10428-106D5;0.69441!10795-110I3;0.0205861!10805-111A4;0.404191!10052-101G7;0.000416187!10189-103D9;0.085506!10589-108D4;0.00774214!10425-106D2;0.0327657!10427-106D4;0.000463408!10702-109G9;0.909086!10432-106D9;0.857993!10496-107C1;0.0613249!10718-109I7;0.291194!10011-101C2;0.525188!10053-101G8;0.0207316!10686-109F2;0.203779!10084-102B3;0.0348344!10012-101C3;0.565541!10085-102B4;0.456694!10482-107A5;0.531465!10419-106C5;0.0029451!10080-102A8;0.0068153!10760-110E4;0.237508!10709-109H7;0.0236047!10710-109H8;0.00407514!10703-109H1;0.304922!10719-109I8;0.00413704!10642-109A3;0.00307449!10177-103C6;3.31133e-06!10164-103B2;0.759152!10173-103C2;0.904963!10166-103B4;0.861542!10083-102B2;0.819781!10188-103D8;0.877532!10552-107I3;0.785747!10553-107I4;0.249276!10013-101C4;0.0010857!10536-107G5;0.0515708!10618-108G6;0.0213623!10423-106C9;0.0567628!10785-110H2;0.0670052!12238-129G6;0.0147182!12239-129G7;0.00765422!12240-129G8;0.240844!10416-106C2;0.000159769!10801-110I9;0.727794!10766-110F1;0.892754!10824-111C5;0.794874!10825-111C6;0.199!10826-111C7;0.22982!10454-106G4;0.171449!10409-106B4;0.193356!10638-108I8;0.658375!10636-108I6;0.0595556!10513-107D9;0.332846!10420-106C6;0.574827!10082-102B1;3.45752e-05!10014-101C5;0.0135689!10070-101I7;0.0169657!10452-106G2;0.0139633!10453-106G3;0.0175207!10449-106F8;0.184567!10042-101F6;0.153574!10069-101I6;0.252518!10193-103E4;0.00513689!10631-108I1;0.556074!10438-106E6;0.423024!10488-107B2;0.0776449!10196-103E7;0.0647854!10071-101I8;0.561048!10071-101I8;0.00462688!10041-101F5;0.492503!10451-106G1;0.0486756!10450-106F9;0.00171212!10604-108F1;0.00127707!10605-108F2;0.0097759!10606-108F3;0.0508746!10603-108E9;0.00414787!10497-107C2;0.00996966!10448-106F7;0.0899988!10643-109A4;0.0199285!10426-106D3;0.0157309!10431-106D8;0.0434111!10197-103E8;0.12873!10443-106F2;0.0304451!10815-111B5;0.267339!10816-111B6;0.376834!10817-111B7;0.26343!10015-101C6;0.327307!10410-106B5;0.00426841!10054-101G9;0.000661026!10758-110E2;0.0310279!10711-109H9;0.369137!10040-101F4;0.0287292!10470-106I2;0.883366!10415-106C1;0.0636518!10198-103E9;0.0653457!10614-108G2;0.0130835!10612-108F9;0.150761!10549-107H9;0.00499356!10615-108G3;0.000657669!10487-107B1;0.0175713!10433-106E1;0.3327!10688-109F4;0.0243924!10444-106F3;0.0742129!10444-106F3;0.10126!10485-107A8;0.0935142!10413-106B8;0.0593659!10175-103C4;0.00250031!10161-103A8;0.493034!12131-128D7;0.280974!10624-108H3;0.0973499!10712-109I1;0.248646!10205-103F7;0.783757!10206-103F8;0.0300786!10207-103F9;0.0783098!10050-101G5;0.0373987!10051-101G6;0.00264901!10016-101C7;0.00639405!10046-101G1;0.0035552!10778-110G4;0.034288!10633-108I3;0.878268!10818-111B8;0.0119695!10819-111B9;0.32342!10820-111C1;0.335792!10484-107A7;0.327652!10808-111A7;0.00545826!10169-103B7;0.413818!10153-102I9;0.514608!13425-144D5;0.512856!13433-144E4;0.00630603!13437-144E8;0.00153704!11904-125F5;0.00720677!11905-125F6;0.657164!10039-101F3;0.646012!10791-110H8;0.75943!10017-101C8;0.00902726!10045-101F9;0.0976872!10509-107D5;0.0893143!10839-111E2;0.000156711!10692-109F8;0.0319627!10079-102A7;0.0206946!10078-102A6;0.00544865!10721-110A1;0.00124903!10569-108B2;0.00697275!10570-108B3;0.199095!10571-108B4;0.0224634!10647-109A8;0.276347!10752-110D5;0.0319062!10782-110G8;0.28359!10726-110A6;0.0341721!10018-101C9;0.00326579!10086-102B5;0.000381853!10182-103D2;0.000223374!10165-103B3;0.381885!10499-107C4;0.250971!10408-106B3;0.00880229!10019-101D1;0.0147561!10068-101I5;0.00494707!10075-102A3;0.0906839!10077-102A5;0.0121717!10727-110A7;0.00194386!10775-110G1;0.925683!10412-106B7;0.569182!12231-129F8;0.154673!12232-129F9;0.824897!12233-129G1;0.341238!12234-129G2;0.519055!10414-106B9;0.780168!10170-103B8;0.00116902!10183-103D3;0.891918!10150-102I6;0.77182!10174-103C3;0.731083!10155-103A2;0.154344!10038-101F2;0.191217!10838-111E1;0.139704!10759-110E3;0.000340977!10514-107E1;0.000140223!10465-106H6;0.00347426!10691-109F7;0.030424!10843-111E6;0.0993083!10844-111E7;0.00129753!11747-123G1;0.018112!11748-123G2;0.940583!11749-123G3;0.774199!11750-123G4;0.676394!11751-123G5;0.493442!11840-124H4;0.908821!11752-123G6;0.633888!11753-123G7;0.645409!11754-123G8;0.964033!11755-123G9;0.793482!11756-123H1;0.35003!11833-124G6;0.700361!11760-123H5;0.545442!11836-124G9;0.407163!11758-123H3;0.661593!11835-124G8;0.819142!11762-123H7;0.349787!11838-124H2;0.458426!11757-123H2;0.29124!11759-123H4;0.455462!11761-123H6;0.499056!11842-124H6;0.88308!11837-124H1;0.536366!10568-108B1;0.370391!13230-141I8;0.694004!13231-141I9;0.70628!10696-109G3;0.985616!10493-107B7;0.0216587!10494-107B8;0.0214089!10850-111F4;0.0673978!10851-111F5;0.230285!10852-111F6;0.00404164!10853-111F7;0.524809!10854-111F8;0.0676021!10855-111F9;0.126598!10856-111G1;0.32388!10847-111F1;0.232793!10846-111E9;0.317546!10848-111F2;0.475441!10845-111E8;0.389365!10857-111G2;0.0972629!10858-111G3;0.416568!10156-103A3;0.883505!11901-125F2;0.697363!11902-125F3;0.206418!11903-125F4;0.426902!10689-109F5;0.436696!10648-109A9;0.0022381!10784-110H1;0.013682!10744-110C6;0.144858!10772-110F7;0.377859!10474-106I6;0.306379!10600-108E6;0.942579!10684-109E9;0.0710557!12226-129F3;0.0164455!12227-129F4;0.140787!10508-107D4;0.0157323!10539-107G8;1.07897e-07!10607-108F4;0.00465701!10555-107I6;0.00268256!10774-110F9;1.79168e-05!10637-108I7;0.00494289!10663-109C6;0.000144854!10728-110A8;0.00527156!10729-110A9;0.000716689!10430-106D7;0.585061!10730-110B1;0.00579711!10813-111B3;0.000121044!10812-111B2;0.153255!10037-101F1;0.496225!10172-103C1;0.721975!10163-103B1;0.955406!10076-102A4;0.616372!10073-102A1;0.740593!10036-101E9;0.280584!10195-103E6;0.835411!10277-104E7;0.783374!10434-106E2;0.429823!10550-107I1;0.119203!10545-107H5;0.0240962!10544-107H4;0.280363!10704-109H2;0.268872!10510-107D6;0.0401668!10558-107I9;0.00243603!10020-101D2;0.00414809!10732-110B3;0.110581!10049-101G4;0.0831594!10698-109G5;0.351605!10437-106E5;0.0654584!10417-106C3;0.00105582!10035-101E8;0.118882!10171-103B9;0.730595!10157-103A4;0.74424!10034-101E7;0.708881!10072-101I9;0.725062!10199-103F1;0.194674!10200-103F2;0.00853261!10697-109G4;0.00883115!10723-110A3;0.000416427!10179-103C8;0.0622712!10160-103A7;0.706674!10180-103C9;0.654289!10162-103A9;0.936166!10021-101D3;0.699739!10840-111E3;0.000948846!10706-109H4;0.845706!10033-101E6;0.165704!10032-101E5;0.294264!10490-107B4;0.723064!10439-106E7;0.0408581!10022-101D4;0.00035298!10176-103C5;0.0601747!10469-106I1;0.991509!10067-101I4;0.0455815!10411-106B6;0.265313!10471-106I3;0.60047!10030-101E3;0.0245734!10475-106I7;0.131102!10787-110H4;1.13549e-05!10477-106I9;0.00182069!10695-109G2;0.00756914!11771-123I7;0.486642!11772-123I8;8.90663e-05!11773-123I9;1.11134e-05!10093-102C3;0.00175029!10442-106F1;0.0445826!10442-106F1;0.124406!10201-103F3;0.176885!10639-108I9;0.238779!11843-124H7;0.25419!11841-124H5;0.400387!10693-109F9;0.0668873!10436-106E4;0.137839!10483-107A6;0.127975!10282-104F3;0.335936!10023-101D5;0.0356501!10066-101I3;0.0179382!10065-101I2;0.00812218!10800-110I8;0.0189453!10610-108F7;5.96612e-05!10841-111E4;6.54645e-05!10541-107H1;0.000643086!10842-111E5;0.000250346!10562-108A4;4.57087e-06!10024-101D6;0.000149648!10064-101I1;0.00527514!10609-108F6;0.00415967!10048-101G3;0.00732197!10781-110G7;0.133083!10181-103D1;0.003891!10159-103A6;0.194398!10056-101H2;0.141656!10737-110B8;0.294748!10025-101D7;0.250678!10044-101F8;0.000854778!10424-106D1;0.000428701!10463-106H4;0.574708!10616-108G4;0.0159802!10486-107A9;0.11109!10062-101H8;0.00560798!10202-103F4;0.0241748!10158-103A5;0.00471441!10441-106E9;0.123641!10031-101E4;0.000457004!10063-101H9;0.656872!10063-101H9;0.375229!11763-123H8;0.00314734!11765-123I1;0.919249!11768-123I4;0.666808!10807-111A6;0.387101!10790-110H7;0.000625313!10798-110I6;0.000787596!10786-110H3;0.0243797!10591-108D6;0.0251026!10593-108D8;0.0253142!10590-108D5;0.0226341!10026-101D8;0.00296185!10096-102C6;0.308869!10168-103B6;0.0160864!10154-103A1;0.300449!10209-103G2;0.311945!10061-101H7;0.00515103!10027-101D9;0.0254824!10043-101F7;0.0512453!10783-110G9;0.0151841!10028-101E1;0.00671072!10060-101H6;0.270547!10203-103F5;0.101118!10059-101H5;0.0022269!10047-101G2;0.000816683!10029-101E2;0.000160521!10058-101H4;0.00336523!10418-106C4;0.0185923!10492-107B6;0.00673542!10694-109G1;0.0330487!10797-110I5;0.0543919!10057-101H3;0.00979828!10100-102D1;0.00718297!10055-101H1;0.214672!10204-103F6;0.168764!10191-103E2;0.137832!10563-108A5;0.00118046
|name=CNhs10846_bu_f1
|name=CNhs10846_bu_f1
|tomtom_result=SFL1#MA0377.1;2;0.00169672;0.807641;1;12;AAGGACAGAAAA;TAGAGAATAGAAGAAATAAAA;+!Tal1::Gata1#MA0140.1;5;0.00368946;1.75618;1;12;AAGGACAGAAAA;CTGGTGGGGACAGATAAG;+!NDT80#MA0343.1;3;0.00490319;2.33392;1;12;AAGGACAGAAAA;TTTCCGGCCACAAAAACGCAA;+!RUNX1#MA0002.2;1;0.00739232;3.51874;1;10;AAGGACAGAAAA;AAACCACAGAC;-!Trl#MA0205.1;-1;0.00779716;3.71145;1;10;AAGGACAGAAAA;GAGAGAGCAA;-!hb#MA0049.1;-2;0.0121694;5.79264;1;10;AAGGACAGAAAA;GCATAAAAAA;+!FEV#MA0156.1;-5;0.0125462;5.97199;1;7;AAGGACAGAAAA;CAGGAAAT;+!ELK1#MA0028.1;-2;0.0140538;6.68961;1;10;AAGGACAGAAAA;GAGCCGGAAG;+!id1#MA0120.1;-1;0.017488;8.3243;1;11;AAGGACAGAAAA;CGAAAAGGAAAA;-
}}
}}

Latest revision as of 13:44, 7 September 2012

Full Name: CNhs10846_bu_f1

Motif matrix
POACGT
1143.8859779030778101.54033550943434105.0683254948174618.966856531287565
2271.247788095222130.00625395084182853.9697303638239914.237723028728874
391.234735976030242.6733536748553837268.13858288827947.414822899452042
486.68258335303307115.59990000684586148.2069364908528518.972075587885293
5205.1904958155359747.85640954296435103.163092035450413.25149804466636
626.035964337831405325.220964791842517.782481292895340.4220850160480233
7360.70204772114720.76644666397417472.23882818891457145.754172864581255
835.626859007140913.209207334421065330.62542909705550.0
9230.2523491332172266.7288009831408971.896021207104270.5843241151545773
10236.9657811056717739.5000651009099681.0158164708366811.97983276119849
11228.71757233652473.0162442352480205104.6666412683083833.06103759853596
12180.4745919178645347.69264660877639134.736382209947646.55787470202854

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
SFL1#MA0377.120.001696720.807641112AAGGACAGAAAATAGAGAATAGAAGAAATAAAA+
Tal1::Gata1#MA0140.150.003689461.75618112AAGGACAGAAAACTGGTGGGGACAGATAAG+
NDT80#MA0343.130.004903192.33392112AAGGACAGAAAATTTCCGGCCACAAAAACGCAA+
RUNX1#MA0002.210.007392323.51874110AAGGACAGAAAAAAACCACAGAC-
Trl#MA0205.1-10.007797163.71145110AAGGACAGAAAAGAGAGAGCAA-
hb#MA0049.1-20.01216945.79264110AAGGACAGAAAAGCATAAAAAA+
FEV#MA0156.1-50.01254625.9719917AAGGACAGAAAACAGGAAAT+
ELK1#MA0028.1-20.01405386.68961110AAGGACAGAAAAGAGCCGGAAG+
id1#MA0120.1-10.0174888.3243111AAGGACAGAAAACGAAAAGGAAAA-
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