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MacroAPE 1083:Motif37: Difference between revisions

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;0.923466!11842-124H6;0.404589!11837-124H1;0.686308!10568-108B1;0.238286!13230-141I8;0.204593!13231-141I9;0.859255!10696-109G3;0.916395!10493-107B7;0.524541!10494-107B8;0.304591!10850-111F4;0.734478!10851-111F5;0.0638093!10852-111F6;0.789823!10853-111F7;0.181067!10854-111F8;0.971486!10855-111F9;0.778114!10856-111G1;0.882457!10847-111F1;0.870366!10846-111E9;0.842342!10848-111F2;0.618475!10845-111E8;0.720169!10857-111G2;0.895641!10858-111G3;0.900387!10156-103A3;0.557913!11901-125F2;0.083319!11902-125F3;0.017646!11903-125F4;0.0304028!10689-109F5;0.0182684!10648-109A9;0.291399!10784-110H1;0.475769!10744-110C6;0.612632!10772-110F7;0.0150061!10474-106I6;0.973246!10600-108E6;0.984703!10684-109E9;0.931787!12226-129F3;0.15012!12227-129F4;0.156231!10508-107D4;0.217246!10539-107G8;0.0311524!10607-108F4;0.0070366!10555-107I6;0.108853!10774-110F9;0.0209709!10637-108I7;0.281805!10663-109C6;0.146041!10728-110A8;0.152031!10729-110A9;0.130953!10430-106D7;0.477932!10730-110B1;0.370552!10813-111B3;0.102659!10812-111B2;0.198857!10037-101F1;0.996811!10172-103C1;0.0665016!10163-103B1;0.0157491!10076-102A4;0.0787647!10073-102A1;0.0369801!10036-101E9;0.0207536!10195-103E6;0.0579133!10277-104E7;0.0496344!10434-106E2;0.234461!10550-107I1;0.527273!10545-107H5;0.948868!10544-107H4;0.226903!10704-109H2;0.899138!10510-107D6;0.357636!10558-107I9;0.0566379!10020-101D2;0.125355!10732-110B3;0.672563!10049-101G4;0.936919!10698-109G5;0.267602!10437-106E5;0.981123!10417-106C3;0.815467!10035-101E8;0.0459145!10171-103B9;0.0706778!10157-103A4;0.0261702!10034-101E7;0.06132!10072-101I9;0.0710259!10199-103F1;0.0251951!10200-103F2;0.521701!10697-109G4;0.800225!10723-110A3;0.125176!10179-103C8;0.253111!10160-103A7;0.0518771!10180-103C9;0.0977262!10162-103A9;0.185538!10021-101D3;0.136667!10840-111E3;0.198849!10706-109H4;0.749761!10033-101E6;0.849811!10032-101E5;0.208361!10490-107B4;0.0597555!10439-106E7;0.825864!10022-101D4;0.308682!10176-103C5;0.533519!10469-106I1;0.0256727!10067-101I4;0.645739!10411-106B6;0.727227!10471-106I3;0.467121!10030-101E3;0.613086!10475-106I7;0.423916!10787-110H4;0.0552092!10477-106I9;0.0925554!10695-109G2;0.15465!11771-123I7;0.672438!11772-123I8;0.710106!11773-123I9;0.816888!10093-102C3;0.475803!10442-106F1;0.221373!10442-106F1;0.459086!10201-103F3;0.437141!10639-108I9;0.610054!11843-124H7;0.24757!11841-124H5;0.489171!10693-109F9;0.9435!10436-106E4;0.47771!10483-107A6;0.238866!10282-104F3;0.0218401!10023-101D5;0.296144!10066-101I3;0.554284!10065-101I2;0.600538!10800-110I8;0.656521!10610-108F7;0.161361!10841-111E4;0.151617!10541-107H1;0.0882578!10842-111E5;0.398929!10562-108A4;0.116359!10024-101D6;0.271064!10064-101I1;0.0255446!10609-108F6;0.339259!10048-101G3;0.437114!10781-110G7;0.911132!10181-103D1;0.232519!10159-103A6;0.192109!10056-101H2;0.287893!10737-110B8;0.172984!10025-101D7;0.361461!10044-101F8;0.0779794!10424-106D1;0.238425!10463-106H4;0.775825!10616-108G4;0.373488!10486-107A9;0.514192!10062-101H8;0.989115!10202-103F4;0.83922!10158-103A5;0.422535!10441-106E9;0.23879!10031-101E4;0.124647!10063-101H9;0.0799376!10063-101H9;0.0309789!11763-123H8;0.516712!11765-123I1;0.714367!11768-123I4;0.889465!10807-111A6;0.47593!10790-110H7;0.0805929!10798-110I6;0.161595!10786-110H3;0.125917!10591-108D6;0.829007!10593-108D8;0.467278!10590-108D5;0.981458!10026-101D8;0.644515!10096-102C6;0.958066!10168-103B6;0.233893!10154-103A1;0.0292819!10209-103G2;0.0977078!10061-101H7;0.202913!10027-101D9;0.967342!10043-101F7;0.887864!10783-110G9;0.506265!10028-101E1;0.52101!10060-101H6;0.678901!10203-103F5;0.831827!10059-101H5;0.168001!10047-101G2;0.698077!10029-101E2;0.0608763!10058-101H4;0.0934305!10418-106C4;0.514113!10492-107B6;0.753414!10694-109G1;0.711374!10797-110I5;0.490869!10057-101H3;0.48876!10100-102D1;0.644949!10055-101H1;0.98679!10204-103F6;0.62219!10191-103E2;0.378703!10563-108A5;0.665753
|name=motif37
|name=motif37
|tomtom_result=Klf4#MA0039.2;1;2.67455e-05;0.0127308;0.0252402;8;CCCCACCC;GCCCCACCCA;-!YPR022C#MA0436.1;0;6.83407e-05;0.0325302;0.0322472;7;CCCCACCC;CCCCACG;+!SP1#MA0079.2;0;0.000164423;0.0782654;0.051723;8;CCCCACCC;CCCCGCCCCC;+!SP1#MA0079.2;1;0.000460496;0.219196;0.0755257;8;CCCCACCC;ACCCCGCCCC;-!MIG2#MA0338.1;0;0.00048977;0.233131;0.0755257;7;CCCCACCC;CCCCGCA;+!MIG3#MA0339.1;0;0.000551026;0.262289;0.0755257;7;CCCCACCC;CCCCGCA;+!RPN4#MA0373.1;0;0.000648437;0.308656;0.0755257;7;CCCCACCC;CGCCACC;-!YGR067C#MA0425.1;1;0.000655667;0.312098;0.0755257;8;CCCCACCC;ACCCCACTTTTTTG;+!YML081W#MA0431.1;1;0.000720269;0.342848;0.0755257;8;CCCCACCC;ACCCCGCAC;+!ADR1#MA0268.1;1;0.000833525;0.396758;0.0786613;6;CCCCACCC;ACCCCAC;+!RREB1#MA0073.1;11;0.00153708;0.731652;0.13187;8;CCCCACCC;CCCCAAACCACCCCCCCCCC;+!MIG1#MA0337.1;1;0.00215186;1.02429;0.169229;6;CCCCACCC;CCCCCGC;+!ZNF354C#MA0130.1;0;0.0046922;2.23349;0.340625;6;CCCCACCC;ATCCAC;+!AFT2#MA0270.1;-1;0.00526051;2.504;0.354603;7;CCCCACCC;CACACCCC;+!MET31#MA0333.1;0;0.00594033;2.8276;0.373733;8;CCCCACCC;CGCCACACT;-!MZF1_1-4#MA0056.1;1;0.0087643;4.17181;0.516939;5;CCCCACCC;TCCCCA;-!CHA4#MA0283.1;1;0.00990658;4.71553;0.549943;7;CCCCACCC;TCTCCGCC;-!ASH1#MA0276.1;0;0.0112691;5.36409;0.580822;8;CCCCACCC;CCCGATCCGG;-!Macho-1#MA0118.1;0;0.0116938;5.56623;0.580822;8;CCCCACCC;GAACCCCCA;-!MET32#MA0334.1;0;0.0130445;6.2092;0.605457;7;CCCCACCC;CGCCACA;+!ZMS1#MA0441.1;2;0.0138163;6.57654;0.605457;7;CCCCACCC;TTCCCCGCA;+!SUT1#MA0399.1;0;0.0141144;6.71848;0.605457;7;CCCCACCC;CCCCGCG;-!Egr1#MA0162.1;2;0.0152815;7.27399;0.606779;8;CCCCACCC;CCGCCCACGCA;-!MZF1_5-13#MA0057.1;2;0.0158423;7.54095;0.606779;8;CCCCACCC;TTCCCCCTAC;-!opa#MA0456.1;2;0.0160742;7.6513;0.606779;8;CCCCACCC;GACCCCCCGCTG;+!Pax4#MA0068.1;21;0.0168285;8.01038;0.610823;8;CCCCACCC;GAAAAATTTCCCATACTCCACTCCCCCCCC;+!btd#MA0443.1;1;0.0192735;9.17421;0.661995;8;CCCCACCC;TCCGCCCCCT;-!UGA3#MA0410.1;0;0.0196413;9.34926;0.661995;8;CCCCACCC;TCCCGCCG;-
}}
}}

Latest revision as of 13:39, 7 September 2012

Full Name: motif37

Motif matrix
POACGT
0105326300
0239264222907108
0305326300
0405326300
0553263000
0605326300
0705326300
0854363631532538259

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Klf4#MA0039.212.67455e-050.01273080.02524028CCCCACCCGCCCCACCCA-
YPR022C#MA0436.106.83407e-050.03253020.03224727CCCCACCCCCCCACG+
SP1#MA0079.200.0001644230.07826540.0517238CCCCACCCCCCCGCCCCC+
SP1#MA0079.210.0004604960.2191960.07552578CCCCACCCACCCCGCCCC-
MIG2#MA0338.100.000489770.2331310.07552577CCCCACCCCCCCGCA+
MIG3#MA0339.100.0005510260.2622890.07552577CCCCACCCCCCCGCA+
RPN4#MA0373.100.0006484370.3086560.07552577CCCCACCCCGCCACC-
YGR067C#MA0425.110.0006556670.3120980.07552578CCCCACCCACCCCACTTTTTTG+
YML081W#MA0431.110.0007202690.3428480.07552578CCCCACCCACCCCGCAC+
ADR1#MA0268.110.0008335250.3967580.07866136CCCCACCCACCCCAC+
RREB1#MA0073.1110.001537080.7316520.131878CCCCACCCCCCCAAACCACCCCCCCCCC+
MIG1#MA0337.110.002151861.024290.1692296CCCCACCCCCCCCGC+
ZNF354C#MA0130.100.00469222.233490.3406256CCCCACCCATCCAC+
AFT2#MA0270.1-10.005260512.5040.3546037CCCCACCCCACACCCC+
MET31#MA0333.100.005940332.82760.3737338CCCCACCCCGCCACACT-
MZF1_1-4#MA0056.110.00876434.171810.5169395CCCCACCCTCCCCA-
CHA4#MA0283.110.009906584.715530.5499437CCCCACCCTCTCCGCC-
ASH1#MA0276.100.01126915.364090.5808228CCCCACCCCCCGATCCGG-
Macho-1#MA0118.100.01169385.566230.5808228CCCCACCCGAACCCCCA-
MET32#MA0334.100.01304456.20920.6054577CCCCACCCCGCCACA+
ZMS1#MA0441.120.01381636.576540.6054577CCCCACCCTTCCCCGCA+
SUT1#MA0399.100.01411446.718480.6054577CCCCACCCCCCCGCG-
Egr1#MA0162.120.01528157.273990.6067798CCCCACCCCCGCCCACGCA-
MZF1_5-13#MA0057.120.01584237.540950.6067798CCCCACCCTTCCCCCTAC-
opa#MA0456.120.01607427.65130.6067798CCCCACCCGACCCCCCGCTG+
Pax4#MA0068.1210.01682858.010380.6108238CCCCACCCGAAAAATTTCCCATACTCCACTCCCCCCCC+
btd#MA0443.110.01927359.174210.6619958CCCCACCCTCCGCCCCCT-
UGA3#MA0410.100.01964139.349260.6619958CCCCACCCTCCCGCCG-
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