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MacroAPE 1083:CNhs10624 bl f0: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;221.53758355360796;478.98811558747263;269.8878493958109;1445.1581009754168!2;44.28338606475204;516.3905609091315;714.319489692187;1140.57821...")
 
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I6;0.634077!10455-106G5;0.172252!10534-107G3;0.706305!10429-106D6;0.0350777!10464-106H5;0.432638!10827-111C8;0.21914!10789-110H6;0.747862!10828-111C9;0.518636!10788-110H5;0.745441!10792-110H9;0.0637346!10765-110E9;0.79524!10829-111D1;0.661018!10830-111D2;0.758914!10831-111D3;0.463897!10832-111D4;0.222964!10833-111D5;0.308395!10764-110E8;0.502041!10770-110F5;0.271604!10399-106A3;0.52948!10400-106A4;0.587127!10405-106A9;0.790124!10834-111D6;0.764381!10835-111D7;0.705682!10836-111D8;0.82537!10837-111D9;0.910346!10699-109G6;0.998377!10802-111A1;0.428405!10796-110I4;0.651923!10010-101C1;0.305033!10810-111A9;0.10199!10421-106C7;0.371643!10708-109H6;0.556393!12235-129G3;0.139519!12236-129G4;0.882937!12237-129G5;0.5813!10167-103B5;0.995197!10151-102I7;0.21991!10428-106D5;0.302556!10795-110I3;0.00295097!10805-111A4;0.806391!10052-101G7;0.585447!10189-103D9;0.0607353!10589-108D4;0.0911714!10425-106D2;0.636054!10427-106D4;0.0188425!10702-109G9;0.422517!10432-106D9;0.70127!10496-107C1;0.0297403!10718-109I7;0.316469!10011-101C2;0.828428!10053-101G8;0.0454544!10686-109F2;0.0122687!10084-102B3;0.926316!10012-101C3;0.278582!10085-102B4;0.161792!10482-107A5;0.877492!10419-106C5;0.219527!10080-102A8;0.0803083!10760-110E4;0.676139!10709-109H7;0.125734!10710-109H8;0.183714!10703-109H1;0.536298!10719-109I8;0.0460848!10642-109A3;0.0589462!10177-103C6;0.00738563!10164-103B2;0.149773!10173-103C2;0.287537!10166-103B4;0.395466!10083-102B2;0.419916!10188-103D8;0.316014!10552-107I3;0.187323!10553-107I4;0.156038!10013-101C4;0.12715!10536-107G5;0.340106!10618-108G6;0.010938!10423-106C9;0.0878535!10785-110H2;0.258945!12238-129G6;0.204323!12239-129G7;0.283518!12240-129G8;0.609334!10416-106C2;0.100251!10801-110I9;0.843029!10766-110F1;0.822329!10824-111C5;0.756293!10825-111C6;0.214613!10826-111C7;0.262098!10454-106G4;0.324529!10409-106B4;0.338071!10638-108I8;0.723858!10636-108I6;0.0207307!10513-107D9;0.38227!10420-106C6;0.221858!10082-102B1;0.0181338!10014-101C5;0.147785!10070-101I7;0.0449481!10452-106G2;0.0299476!10453-106G3;0.333537!10449-106F8;0.51354!10042-101F6;0.444055!10069-101I6;0.089873!10193-103E4;0.0394644!10631-108I1;0.215516!10438-106E6;0.64309!10488-107B2;0.36811!10196-103E7;0.812469!10071-101I8;0.478863!10071-101I8;0.028349!10041-101F5;0.976016!10451-106G1;0.0609778!10450-106F9;0.072887!10604-108F1;0.0251494!10605-108F2;0.577258!10606-108F3;0.867354!10603-108E9;0.427691!10497-107C2;0.448534!10448-106F7;0.672456!10643-109A4;0.113187!10426-106D3;0.0565996!10431-106D8;0.150083!10197-103E8;0.0743945!10443-106F2;0.0123972!10815-111B5;0.318059!10816-111B6;0.0345902!10817-111B7;0.0141357!10015-101C6;0.0195321!10410-106B5;0.0540903!10054-101G9;0.858947!10758-110E2;0.0249607!10711-109H9;0.0209411!10040-101F4;0.00116015!10470-106I2;0.282941!10415-106C1;0.549017!10198-103E9;0.00732932!10614-108G2;0.0701847!10612-108F9;0.0390886!10549-107H9;0.358516!10615-108G3;0.0211774!10487-107B1;0.09306!10433-106E1;0.241028!10688-109F4;0.520128!10444-106F3;0.139535!10444-106F3;0.320019!10485-107A8;0.252057!10413-106B8;0.0357717!10175-103C4;0.0160762!10161-103A8;0.0986055!12131-128D7;0.104905!10624-108H3;0.693716!10712-109I1;0.0690491!10205-103F7;0.199573!10206-103F8;0.114514!10207-103F9;0.162171!10050-101G5;0.54476!10051-101G6;0.265935!10016-101C7;0.0596098!10046-101G1;0.0703673!10778-110G4;0.377295!10633-108I3;0.950464!10818-111B8;0.118273!10819-111B9;0.113481!10820-111C1;0.150904!10484-107A7;0.126596!10808-111A7;0.062708!10169-103B7;0.570781!10153-102I9;0.179979!13425-144D5;0.247759!13433-144E4;0.117876!13437-144E8;0.142709!11904-125F5;0.191244!11905-125F6;0.38096!10039-101F3;0.99295!10791-110H8;0.33795!10017-101C8;0.243975!10045-101F9;0.305328!10509-107D5;0.489905!10839-111E2;0.0119348!10692-109F8;0.198507!10079-102A7;0.103118!10078-102A6;0.00769423!10721-110A1;0.0458246!10569-108B2;0.689695!10570-108B3;0.821295!10571-108B4;0.0696335!10647-109A8;0.530923!10752-110D5;0.0266814!10782-110G8;0.266354!10726-110A6;0.983448!10018-101C9;0.0132458!10086-102B5;0.0407984!10182-103D2;0.0340498!10165-103B3;0.145419!10499-107C4;0.147108!10408-106B3;0.0800943!10019-101D1;0.804001!10068-101I5;0.332571!10075-102A3;0.606591!10077-102A5;0.562572!10727-110A7;0.0889914!10775-110G1;0.739564!10412-106B7;0.537934!12231-129F8;0.165598!12232-129F9;0.826446!12233-129G1;0.767332!12234-129G2;0.789355!10414-106B9;0.653737!10170-103B8;0.202867!10183-103D3;0.250744!10150-102I6;0.254277!10174-103C3;0.300256!10155-103A2;0.0394687!10038-101F2;0.0586878!10838-111E1;0.0872879!10759-110E3;0.0629861!10514-107E1;0.0248475!10465-106H6;0.00658612!10691-109F7;0.527325!10843-111E6;0.551559!10844-111E7;0.241675!11747-123G1;0.169603!11748-123G2;0.180341!11749-123G3;0.12768!11750-123G4;0.640898!11751-123G5;0.370115!11840-124H4;0.932071!11752-123G6;0.546842!11753-123G7;0.998382!11754-123G8;0.831286!11755-123G9;0.330686!11756-123H1;0.0479266!11833-124G6;0.0904996!11760-123H5;0.384188!11836-124G9;0.0763895!11758-123H3;0.937324!11835-124G8;0.670756!11762-123H7;0.644333!11838-124H2;0.531714!11757-123H2;0.798662!11759-123H4;0.344687!11761-123H6;0.0968205!11842-124H6;0.076591!11837-124H1;0.66583!10568-108B1;0.774842!13230-141I8;0.276489!13231-141I9;0.722858!10696-109G3;0.4426!10493-107B7;0.596396!10494-107B8;0.301612!10850-111F4;0.142305!10851-111F5;0.0596554!10852-111F6;0.0280931!10853-111F7;0.325276!10854-111F8;0.158088!10855-111F9;0.161141!10856-111G1;0.591639!10847-111F1;0.140007!10846-111E9;0.074678!10848-111F2;0.0497002!10845-111E8;0.0122169!10857-111G2;0.097289!10858-111G3;0.205744!10156-103A3;0.65016!11901-125F2;0.280652!11902-125F3;0.189112!11903-125F4;0.205247!10689-109F5;0.514561!10648-109A9;0.00457902!10784-110H1;0.15862!10744-110C6;0.372091!10772-110F7;0.126309!10474-106I6;0.278961!10600-108E6;0.00621425!10684-109E9;0.0824629!12226-129F3;0.0891113!12227-129F4;0.407728!10508-107D4;0.88979!10539-107G8;0.108103!10607-108F4;0.598471!10555-107I6;0.000681946!10774-110F9;0.284371!10637-108I7;0.124175!10663-109C6;0.299382!10728-110A8;0.148243!10729-110A9;0.0233965!10430-106D7;0.345627!10730-110B1;0.032917!10813-111B3;0.512785!10812-111B2;0.546095!10037-101F1;0.777099!10172-103C1;0.306802!10163-103B1;0.291665!10076-102A4;0.286308!10073-102A1;0.236519!10036-101E9;0.978187!10195-103E6;0.40496!10277-104E7;0.286176!10434-106E2;0.0124145!10550-107I1;0.201468!10545-107H5;0.186343!10544-107H4;0.260256!10704-109H2;0.0779529!10510-107D6;0.0990053!10558-107I9;0.00791789!10020-101D2;0.0292583!10732-110B3;0.217846!10049-101G4;0.137119!10698-109G5;0.140749!10437-106E5;0.28482!10417-106C3;0.0774701!10035-101E8;0.350191!10171-103B9;0.345808!10157-103A4;0.268602!10034-101E7;0.296289!10072-101I9;0.342502!10199-103F1;0.730238!10200-103F2;0.270956!10697-109G4;0.0453024!10723-110A3;0.286768!10179-103C8;0.21633!10160-103A7;0.210388!10180-103C9;0.346693!10162-103A9;0.0223099!10021-101D3;0.0735099!10840-111E3;0.735376!10706-109H4;0.774437!10033-101E6;0.0647671!10032-101E5;0.11026!10490-107B4;0.366056!10439-106E7;0.146578!10022-101D4;0.0589892!10176-103C5;0.119326!10469-106I1;0.290489!10067-101I4;0.381349!10411-106B6;0.371045!10471-106I3;0.11566!10030-101E3;0.133999!10475-106I7;0.150074!10787-110H4;0.0367388!10477-106I9;0.488978!10695-109G2;0.255953!11771-123I7;0.635815!11772-123I8;0.167204!11773-123I9;0.189359!10093-102C3;0.515385!10442-106F1;0.0646983!10442-106F1;0.122141!10201-103F3;0.0823839!10639-108I9;0.184307!11843-124H7;0.0422309!11841-124H5;0.0402172!10693-109F9;0.0102392!10436-106E4;0.0587216!10483-107A6;0.866879!10282-104F3;0.899078!10023-101D5;0.0133987!10066-101I3;0.00327184!10065-101I2;0.0852017!10800-110I8;0.110153!10610-108F7;0.0569068!10841-111E4;0.0442953!10541-107H1;0.0723591!10842-111E5;0.15064!10562-108A4;0.0315238!10024-101D6;0.093747!10064-101I1;0.11503!10609-108F6;0.159696!10048-101G3;0.958387!10781-110G7;0.338658!10181-103D1;0.223925!10159-103A6;0.0420686!10056-101H2;0.0469832!10737-110B8;0.20826!10025-101D7;0.0650708!10044-101F8;0.0439214!10424-106D1;0.110902!10463-106H4;0.953241!10616-108G4;0.272729!10486-107A9;0.32397!10062-101H8;0.259007!10202-103F4;0.388094!10158-103A5;0.035015!10441-106E9;0.0287215!10031-101E4;0.0369948!10063-101H9;0.300479!10063-101H9;0.980231!11763-123H8;0.0436704!11765-123I1;0.775756!11768-123I4;0.786687!10807-111A6;0.779079!10790-110H7;0.0206385!10798-110I6;0.031863!10786-110H3;0.420233!10591-108D6;0.065567!10593-108D8;0.0849737!10590-108D5;0.183857!10026-101D8;0.140513!10096-102C6;0.0211878!10168-103B6;0.870991!10154-103A1;0.113388!10209-103G2;0.169176!10061-101H7;0.00866893!10027-101D9;0.0392627!10043-101F7;0.216898!10783-110G9;0.311197!10028-101E1;0.000780623!10060-101H6;0.164885!10203-103F5;0.384536!10059-101H5;0.00408444!10047-101G2;0.00806261!10029-101E2;0.0168176!10058-101H4;0.0538626!10418-106C4;0.046367!10492-107B6;0.00788957!10694-109G1;0.117486!10797-110I5;0.652495!10057-101H3;0.535293!10100-102D1;0.218701!10055-101H1;0.919867!10204-103F6;0.959461!10191-103E2;0.814664!10563-108A5;0.019877
|name=CNhs10624_bl_f0
|name=CNhs10624_bl_f0
|tomtom_result=PPARG::RXRA#MA0065.2;0;0.00139462;0.66384;0.475461;12;TTTCTTCTGCCT;TGACCTTTGCCCTAC;-!SFL1#MA0377.1;5;0.0016437;0.782401;0.475461;12;TTTCTTCTGCCT;TTTTATTTCTTCTATTCTCTA;-!Trl#MA0205.1;-1;0.00170058;0.809477;0.475461;10;TTTCTTCTGCCT;TTGCTCTCTC;+!id1#MA0120.1;0;0.00199824;0.951163;0.475461;12;TTTCTTCTGCCT;TTTTCCTTTTCG;+!HMG-I/Y#MA0045.1;4;0.00378027;1.79941;0.71958;12;TTTCTTCTGCCT;GTTTTTCCATTTGTTG;-!CUP2#MA0287.1;2;0.00937794;4.4639;0.999747;9;TTTCTTCTGCCT;CATTTCTGCTG;-!Klf4#MA0039.1;2;0.0105569;5.02509;0.999747;8;TTTCTTCTGCCT;CCTTCCTTTA;-!hb#MA0049.1;0;0.0141841;6.75164;0.999747;10;TTTCTTCTGCCT;TTTTTTATGC;-!AZF1#MA0277.1;0;0.0171384;8.15786;0.999747;9;TTTCTTCTGCCT;TTTCTTTTT;-!GCR2#MA0305.1;-5;0.0184233;8.76949;0.999747;7;TTTCTTCTGCCT;GCTTCCT;+!SPI1#MA0080.2;-5;0.0195713;9.31595;0.999747;7;TTTCTTCTGCCT;ACTTCCT;-
}}
}}

Latest revision as of 13:37, 7 September 2012

Full Name: CNhs10624_bl_f0

Motif matrix
POACGT
1221.53758355360796478.98811558747263269.88784939581091445.1581009754168
244.28338606475204516.3905609091315714.3194896921871140.5782128462354
382.64319518501956889.2063933480634442.49792045650891001.2241405227131
4105.894691095267061315.377310315594326.824628281998255967.4750198194469
531.3937544690479021125.0155423158181.64581579621119721257.5165369312285
64.594183975140621125.5290834215268521.1731472532260522264.27523486241
70.242702345656354872267.961993127677542.02380498776593105.34314905120226
824.1715283974655722.7897866362954490.02388.6103344785406
98.03889182172518332.739469091771871211.0862387591983863.7070498396097
104.38025517002862051422.291283087326176.63336838877973812.2667428661722
1190.353847518311431704.14368419059342.7595756385101136618.3145421648941
12387.31409764913434814.61807477557033.5955732608193491210.0439038267807

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
PPARG::RXRA#MA0065.200.001394620.663840.47546112TTTCTTCTGCCTTGACCTTTGCCCTAC-
SFL1#MA0377.150.00164370.7824010.47546112TTTCTTCTGCCTTTTTATTTCTTCTATTCTCTA-
Trl#MA0205.1-10.001700580.8094770.47546110TTTCTTCTGCCTTTGCTCTCTC+
id1#MA0120.100.001998240.9511630.47546112TTTCTTCTGCCTTTTTCCTTTTCG+
HMG-I/Y#MA0045.140.003780271.799410.7195812TTTCTTCTGCCTGTTTTTCCATTTGTTG-
CUP2#MA0287.120.009377944.46390.9997479TTTCTTCTGCCTCATTTCTGCTG-
Klf4#MA0039.120.01055695.025090.9997478TTTCTTCTGCCTCCTTCCTTTA-
hb#MA0049.100.01418416.751640.99974710TTTCTTCTGCCTTTTTTTATGC-
AZF1#MA0277.100.01713848.157860.9997479TTTCTTCTGCCTTTTCTTTTT-
GCR2#MA0305.1-50.01842338.769490.9997477TTTCTTCTGCCTGCTTCCT+
SPI1#MA0080.2-50.01957139.315950.9997477TTTCTTCTGCCTACTTCCT-
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